ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPR3_CAEEL (P43507) Cathepsin B-like cysteine proteinase 3 precu... 31 0.94
2FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead... 28 8.0
3FOXL2_HUMAN (P58012) Forkhead box protein L2 28 8.0

>CPR3_CAEEL (P43507) Cathepsin B-like cysteine proteinase 3 precursor (EC|
           3.4.22.-) (Cysteine protease-related 3)
          Length = 370

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +3

Query: 168 YELGDADLAFRL-----HYLRGVYYYSAGKVVRGVTTKV 269
           Y  G  + ++++     HY  GVY+Y++GK+V G   K+
Sbjct: 250 YHYGPVEASYKVYEDFYHYKSGVYHYTSGKLVGGHAVKI 288



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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 118 PCTAAVASPSSPMPT-APRNSWVCVQAREFSLCECT 14
           P + A A+P +P PT AP   + C +  E ++  C+
Sbjct: 323 PASPATAAPPAPAPTSAPGLQFACARQPELAMMHCS 358



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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 118 PCTAAVASPSSPMPT-APRNSWVCVQAREFSLCECT 14
           P + A A+P +P PT AP   + C +  E ++  C+
Sbjct: 324 PASPATAAPPAPAPTSAPGLQFACARQPELAMMHCS 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,482,657
Number of Sequences: 219361
Number of extensions: 241300
Number of successful extensions: 1015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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