ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09c05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 226 bits (576), Expect = 2e-59 Identities = 114/115 (99%), Positives = 114/115 (99%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 290 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVVN 455 AVDQDNGGRGKVGAEAELEQWVTSLPSLTT ESKFGLTFDWEVEKLGVPGAIVVN Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 115
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 193 bits (491), Expect = 2e-49 Identities = 93/114 (81%), Positives = 108/114 (94%), Gaps = 1/114 (0%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 294 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 VD +NG RGKVGAEA LEQW+T SLPSLTT ES+FG+TFDW+V+KLGVPGAI+V Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 178 bits (452), Expect = 5e-45 Identities = 84/113 (74%), Positives = 102/113 (90%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 VD +NG RG+VG EA LEQW+TSLPSLTT ESKFG+TF+WEVEK+G+PGAI+V Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIV 112
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 120 bits (302), Expect = 1e-27 Identities = 58/113 (51%), Positives = 82/113 (72%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 DQ+N GRG VG+EA LEQ +T LPS++ ESK + F+WE++K GVPGAI++ Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIII 112
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 113 bits (283), Expect = 2e-25 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 3/116 (2%) Frame = +3 Query: 114 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLIS 284 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 285 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 S D +NG +GK+G A LE W+T++ SLT ES F +TFD+E + G PGA ++ Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETD-FGYPGAFLI 115
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 105 bits (263), Expect = 4e-23 Identities = 51/114 (44%), Positives = 78/114 (68%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 290 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 +V+ D G GK+ A LE W+T + +T ES F +TFDW+ ++ GVPGA ++ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFII 112
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 103 bits (258), Expect = 2e-22 Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 6/120 (5%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 272 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 273 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 +L+S+TA D NGGRGK+G A LE+ V ++ S ES F + F+W+ E G+PGA+VV Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 92.8 bits (229), Expect = 4e-19 Identities = 53/113 (46%), Positives = 71/113 (62%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 D NG +GK A LE ++ +L L E+ FG+TFDW E+ GVPGA V+ Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWN-EEFGVPGAFVI 113
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 84.0 bits (206), Expect = 2e-16 Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 18/119 (15%) Frame = +3 Query: 150 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVTCQ 275 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 276 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 LIS+T D + G+GKVG + LE + SLP+L ES F + F+W+ E +G+PGA + Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHE-MGIPGAFYI 125
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 81.6 bits (200), Expect = 8e-16 Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = +3 Query: 144 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 323 G + S ++KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 324 VGAEAELEQWVTSLPSLTT-XESKFGLTFDWEVEKLGVPGAIVV 452 A LE + +L LT E+ FG+TFDW E+ GVPGA ++ Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDWN-EEFGVPGAFII 114
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 79.7 bits (195), Expect = 3e-15 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 13/114 (11%) Frame = +3 Query: 150 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVTCQLISST 290 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 D G+GK+G LE ++SLP+L +S F + F+W+ + +G+PGA + Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYI 120
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 79.3 bits (194), Expect = 4e-15 Identities = 44/97 (45%), Positives = 63/97 (64%) Frame = +3 Query: 162 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAE 341 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 342 LEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 LE TSLP+L ES F + F+W+ +G+PGA + Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYI 99
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 75.5 bits (184), Expect = 6e-14 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Frame = +3 Query: 162 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVTCQLISS 287 ++KGTVVLMRKNVLD N + +D + FLG+ V QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 288 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 T + G+GKVG + LE + SLP+L ES F + F+W+ E +G+PGA + Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD-ESMGIPGAFYI 129
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 74.3 bits (181), Expect = 1e-13 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 20/120 (16%) Frame = +3 Query: 153 KSARLKGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGVTC 272 + +LKGTV+LM+KNVLD+N A +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 273 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ +G PGA + Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD-SNMGTPGAFYI 124
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 73.9 bits (180), Expect = 2e-13 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 13/126 (10%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 254 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 255 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGV 434 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L +S F + F+W+ + G+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD-DGSGI 111 Query: 435 PGAIVV 452 GA + Sbjct: 112 LGAFYI 117
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 71.6 bits (174), Expect = 9e-13 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 22/123 (17%) Frame = +3 Query: 150 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 263 +K ++KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 264 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGA 443 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ G+PGA Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDA-SFGIPGA 122 Query: 444 IVV 452 + Sbjct: 123 FYI 125
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 68.6 bits (166), Expect = 7e-12 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 22/123 (17%) Frame = +3 Query: 150 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 263 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 264 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGA 443 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ E G+P A Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD-ENFGIPEA 122 Query: 444 IVV 452 + Sbjct: 123 FYI 125
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 65.5 bits (158), Expect = 6e-11 Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 13/113 (11%) Frame = +3 Query: 153 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------TCQLISSTA 293 K ++KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLGVPGAIVV 452 D GG+GK+G L +T LP+L E + + F+W+ + G+PGA + Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWDSD-FGIPGAFYI 113
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 33.1 bits (74), Expect = 0.34 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 242 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 241 MP--SMMVAP 218 + S++++P Sbjct: 453 LESGSLLISP 462
>SYS_NEIMA (Q9JT77) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 32.0 bits (71), Expect = 0.76 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Frame = +3 Query: 132 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNG 311 D L KS ++K + +N + GA + G G+ V ++ D + Sbjct: 31 DALEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQVAMDQVAQIKTDLEQA 87 Query: 312 GRGKVGAEAELEQWVTSLPSLTTXESKFGL--TFDWEVEKLGVP 437 + EL+ W+ S+P+L + FG T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHEDVPFGKDETENVEVRKVGTP 131
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 135 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 230 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTP---LPR 251 S +QS RP + V + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 250 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 134 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.4 bits (67), Expect = 2.2 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%) Frame = -2 Query: 451 TTMAPG---TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 281 TT+A G TPS ST S P+L + + + + S++ T P PP+ L Sbjct: 4598 TTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPV-------L 4650 Query: 280 ISWQVTPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPV 140 S TP +S S +P++ ++T +++T S A F P+ Sbjct: 4651 TSMATTPAATSSKATSSS-SPRT--ATTLPVLTSTATKSTATSFTPI 4694 Score = 29.6 bits (65), Expect = 3.8 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 18/109 (16%) Frame = -2 Query: 430 PSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPR 251 PS + + + P L S + + +SS+S T P+ STA + + TP+P Sbjct: 4637 PSSTPGTTPIPPVLTSMATTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPS 4696 Query: 250 N-------------SPMPSMMV-----APKSLRSSTFLRMSTTVPLSRA 158 + +PM +M P++ +ST L +TT ++RA Sbjct: 4697 STLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVL--TTTATMTRA 4743 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = -2 Query: 451 TTMAPG---TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 281 TT+A G TPS ST S P+L + + + + S++ T P PP+ +TA Sbjct: 3337 TTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTP 3396 Query: 280 ISWQVTPLPRNS 245 + T P ++ Sbjct: 3397 AATSSTVTPSSA 3408 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = -2 Query: 451 TTMAPG---TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 281 TT+A G TPS ST S P+L + + + + S++ T P PP+ +TA Sbjct: 2110 TTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTP 2169 Query: 280 ISWQVTPLPRNS 245 + T P ++ Sbjct: 2170 AATSSTVTPSSA 2181
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 334 SAPTFPRPPLSWS-TAVELISWQVTPLPRNSPMPSMMVAPKSLRSS 200 +A T P PPLS + ++V ++S PL +NS +PS++ +S R+S Sbjct: 960 AASTMPPPPLSRAPSSVSMVS--PPPLHKNSRVPSLVATSESPRAS 1003
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -2 Query: 448 TMAPGTPSFSTSQSKVRPNLDSXVVSDGRLVT-HCSSSASAPTFPRPPLSWSTAVELISW 272 T+APGTP +S++ + G T HCS++ + P P + WS + W Sbjct: 2527 TVAPGTPQVQVEESEL-------TLEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 271 Q 269 Q Sbjct: 2576 Q 2576
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -2 Query: 409 SKVRPNL-----DSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 245 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 244 PMP--SMMVAPKSL 209 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 29.3 bits (64), Expect = 4.9 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP---- 254 STS +P LD+ +DG S ASA P+P + + + S TP P Sbjct: 842 STSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSF 901 Query: 253 ----------RNSPMPSMMVAPKSLRSS 200 N+P + AP S +S Sbjct: 902 GNNSGVKASSNNNPSTNSSTAPFSFGTS 929
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 29.3 bits (64), Expect = 4.9 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -2 Query: 430 PSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVE--LISWQVTPL 257 PS STS + L + ++ T + + P+ S S + +++W ++ L Sbjct: 1891 PSLSTSLRAITSTLADVKHTFEKMTTSVTPGTTLPSILSGATSGSVISKSPILTWLLSSL 1950 Query: 256 PRNSPMPSMMVAPKSLRSST 197 P SP ++ AP + SST Sbjct: 1951 PSGSPPATVSNAPHVMTSST 1970
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 242 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 241 MP--SMMVAP 218 + S++++P Sbjct: 459 LESGSLLISP 468
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/90 (28%), Positives = 36/90 (40%) Frame = -2 Query: 433 TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 254 TPS ST++S P S S VT ++ +S+ P P S++ S P P Sbjct: 670 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSAPVPTP 725 Query: 253 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 164 +S S + SST S V S Sbjct: 726 SSSTTESSSAPVPTPSSSTTESSSAPVTSS 755 Score = 28.9 bits (63), Expect = 6.4 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = -2 Query: 433 TPSFSTSQSKVRPNLDSXVVSDGRLV-THCSSSASAPTFPRPPLSWSTAVELISWQVTPL 257 TPS ST++S P S S V T SS+ + + P P S ST + TP Sbjct: 613 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPS 672 Query: 256 PRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAP 143 + S V + SS+ S+T S A + P Sbjct: 673 SSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 710 Score = 28.9 bits (63), Expect = 6.4 Identities = 21/90 (23%), Positives = 38/90 (42%) Frame = -2 Query: 433 TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 254 TPS ST++S P S S VT ++ +S+ P P S + + T Sbjct: 358 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 417 Query: 253 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 164 ++P+ S S ++ S++ P++ Sbjct: 418 SSAPVTSSTTESSSAPVTSSTTESSSAPVT 447 Score = 28.5 bits (62), Expect = 8.4 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 2/92 (2%) Frame = -2 Query: 433 TPSFSTSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 254 TPS ST++S P S S V SSS++ + + +S+ E S T P Sbjct: 841 TPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTP 900 Query: 253 RNSPMPSMM--VAPKSLRSSTFLRMSTTVPLS 164 +S P + S +T + TT ++ Sbjct: 901 SSSKYPGSQTETSVSSTTETTIVPTKTTTSVT 932
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -2 Query: 352 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPKSLR 206 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 205 SSTFLR 188 TFLR Sbjct: 63 PETFLR 68
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 199 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 199 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +3 Query: 186 MRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 365 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 366 PSLTTXES 389 L S Sbjct: 147 EKLNLIAS 154
>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101| Length = 625 Score = 25.8 bits (55), Expect(2) = 8.0 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = -2 Query: 397 PNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMPSMMVAP 218 P++ + S TH S S S+ T P S S V+ NSPM S ++P Sbjct: 382 PHVSTSYASAPMTATHSSHSVSSGTPALTPPSSS---------VSYTSGNSPMSSSGMSP 432 Query: 217 KSLRSST 197 S SST Sbjct: 433 ISRHSST 439 Score = 21.2 bits (43), Expect(2) = 8.0 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 123 LPAASCSWPPLLAFTAPTNGTSTLF 49 LPA + + P + TAPT+ T F Sbjct: 447 LPAVTLGYSPHHSATAPTSTLGTNF 471
>SYS_NEIMB (Q9JY95) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%) Frame = +3 Query: 132 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNG 311 DTL KS ++K + +N + GA + G G+ ++ D + Sbjct: 31 DTLEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQAAMNQVAQIKTDLEQA 87 Query: 312 GRGKVGAEAELEQWVTSLPSLTTXESKFGL--TFDWEVEKLGVP 437 + EL+ W+ S+P+L G T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHESVPAGKDETENVEVRKVGTP 131
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = -2 Query: 442 APGTPSFSTSQSK-VRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 266 A + S TSQ+K + P+ +S + + A APT P PP T + + + Sbjct: 83 AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142 Query: 265 TPLPRNSPMPS 233 P P+P+ Sbjct: 143 VTTPIPEPVPA 153
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 187 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,282,966 Number of Sequences: 219361 Number of extensions: 858082 Number of successful extensions: 3520 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3263 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3477 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
