Clone Name | bastl09c02 |
---|---|
Clone Library Name | barley_pub |
>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 63.9 bits (154), Expect = 9e-11 Identities = 30/33 (90%), Positives = 31/33 (93%) Frame = +1 Query: 304 VQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402 VQRL + ASLETDSRLRVRITDADHPRWEVPQD Sbjct: 60 VQRLAVYASLETDSRLRVRITDADHPRWEVPQD 92
>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 903 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 29/36 (80%) Frame = +1 Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402 GP +Q L +TASLE++ RLRVRITDA H RWE+P + Sbjct: 69 GPDIQLLSITASLESNDRLRVRITDAKHRRWEIPDN 104
>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 913 Score = 43.9 bits (102), Expect = 9e-05 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +1 Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402 GP + L TAS E D LR+R TDA++ RWE+P + Sbjct: 74 GPDIHFLSFTASFEEDDTLRIRFTDANNRRWEIPNE 109
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/34 (61%), Positives = 22/34 (64%) Frame = +1 Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396 G + LRL ETDSRLRV ITDA RWEVP Sbjct: 62 GSDITTLRLFVKHETDSRLRVHITDAKQQRWEVP 95
>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1840 Score = 33.5 bits (75), Expect = 0.12 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +1 Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396 P+ G ++ + LT +T +R R +ITD ++ R+EVP Sbjct: 143 PSPTLFGEDIKSVILTTQTQTGNRFRFKITDPNNKRYEVP 182
>MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: Maltase (EC| 3.2.1.20) (Alpha-glucosidase); Glucoamylase (EC 3.2.1.3) (Glucan 1,4-alpha-glucosidase)] Length = 1856 Score = 33.5 bits (75), Expect = 0.12 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402 P+ G V + LTA +T +R ++TD + R+EVP + Sbjct: 158 PSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHE 199
>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1812 Score = 32.0 bits (71), Expect = 0.36 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396 G + L LT +T +R R +ITD ++ R+EVP Sbjct: 124 GDNITNLLLTTQSQTANRFRFKITDPNNQRYEVP 157
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 31.2 bits (69), Expect = 0.62 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396 G + + LT +T +RLR ++TD ++ R+EVP Sbjct: 139 GNDINNVLLTTESQTANRLRFKLTDPNNKRYEVP 172
>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396 P+ G + + T +T +R R +ITD ++ R+EVP Sbjct: 133 PSPTLFGNDINSVLFTTQNQTPNRFRFKITDPNNRRYEVP 172
>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) Length = 953 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 304 VQRLRLTASLETDSRLRVRITDADHPRWEVP 396 V L+L +ETDSRL +I D R+EVP Sbjct: 164 VLTLQLEVLMETDSRLHFKIKDPASKRYEVP 194
>CLPB_HAEIN (P44403) Chaperone clpB| Length = 856 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 396 RHLPSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKRQLQPRRQSAPR 226 R LP + + + D A ++R+E S+ EPLD R ERR+ + ++ LQ A R Sbjct: 384 RQLPDKAIDLID-EAASSIRMEIDSKPEPLD-RLERRIIQLKLEQQALQKEEDEASR 438
>CLPB_HAEDU (Q7VNH1) Chaperone clpB| Length = 856 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -1 Query: 396 RHLPSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKRQLQPRRQSAPR 226 R LP + + + D A ++R+E S+ EPLD + ERR+ + ++ LQ + A R Sbjct: 382 RQLPDKAIDLID-EAASSLRMEIDSKPEPLD-KLERRIIQLKLERQALQKEKDEASR 436
>YADA1_YEREN (P31489) Adhesin yadA precursor| Length = 455 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -2 Query: 98 DGVAIGARAGKGSTGCAVQAQRKEPGRAS 12 DGVAIGARA TG AV K + S Sbjct: 126 DGVAIGARASTSDTGVAVGFNSKADAKNS 154
>RS4_METBF (Q46GC8) 30S ribosomal protein S4P| Length = 216 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 387 PSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKR 259 P R V V A L A +EA+ +P R GR+ G+R Sbjct: 174 PERPVQVASVLADSTTTLRAVAEAKQAKEKPPERGGRKRRGRR 216
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 24.6 bits (52), Expect(2) = 5.0 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -1 Query: 312 PLDTRPERRV---GRRLAGKRQLQPRRQSAPRLGRRHDVVPP 196 P TRP RR R + +R+ PRR+ +PR +PP Sbjct: 291 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP 332 Score = 21.9 bits (45), Expect(2) = 5.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 100 RTASPSEHAQGRGAPGVRCRRSARSPAGPAN 8 R P H + R +PG R RRS+ S +G ++ Sbjct: 329 RMPPPPRHRRSR-SPGRRRRRSSASLSGSSS 358
>LYAG_HUMAN (P10253) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) (Aglucosidase alfa) [Contains: 76 kDa lysosomal alpha-glucosidase; 70 kDa lysosomal alpha-glucosidase] Length = 952 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 313 LRLTASLETDSRLRVRITDADHPRWEVP 396 LRL +ET++RL I D + R+EVP Sbjct: 167 LRLDVMMETENRLHFTIKDPANRRYEVP 194
>YADA_YERPS (P10858) Adhesin yadA precursor| Length = 432 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/18 (72%), Positives = 13/18 (72%) Frame = -2 Query: 98 DGVAIGARAGKGSTGCAV 45 DGVAIGARA TG AV Sbjct: 159 DGVAIGARASASDTGVAV 176
>H11_VOLCA (Q08864) Histone H1-I| Length = 260 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/44 (27%), Positives = 24/44 (54%) Frame = -1 Query: 321 EAEPLDTRPERRVGRRLAGKRQLQPRRQSAPRLGRRHDVVPPAA 190 +A P +P++ + AGK++ P+ ++AP+ + D P A Sbjct: 188 KATPKAEKPKKAATPKSAGKKKATPKPKAAPKSPAKKDAKPKKA 231
>GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-protein coupled| receptor PGR10) Length = 731 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +2 Query: 185 APAAGGTTSCRRPSRGAL 238 APAA G +CRR +RG L Sbjct: 279 APAAAGAEACRRENRGTL 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,125,503 Number of Sequences: 219361 Number of extensions: 486467 Number of successful extensions: 2456 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2264 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2454 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)