ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 64 9e-11
2AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 53 2e-07
3AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 44 9e-05
4XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-) 43 2e-04
5SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucr... 33 0.12
6MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: M... 33 0.12
7SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Su... 32 0.36
8SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Su... 31 0.62
9SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Su... 30 1.1
10LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.... 30 1.4
11CLPB_HAEIN (P44403) Chaperone clpB 30 1.4
12CLPB_HAEDU (Q7VNH1) Chaperone clpB 29 2.3
13YADA1_YEREN (P31489) Adhesin yadA precursor 28 4.0
14RS4_METBF (Q46GC8) 30S ribosomal protein S4P 28 4.0
15SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 25 5.0
16LYAG_HUMAN (P10253) Lysosomal alpha-glucosidase precursor (EC 3.... 28 5.2
17YADA_YERPS (P10858) Adhesin yadA precursor 28 6.8
18H11_VOLCA (Q08864) Histone H1-I 28 6.8
19GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-... 27 8.9

>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 877

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +1

Query: 304 VQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402
           VQRL + ASLETDSRLRVRITDADHPRWEVPQD
Sbjct: 60  VQRLAVYASLETDSRLRVRITDADHPRWEVPQD 92



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>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 903

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402
           GP +Q L +TASLE++ RLRVRITDA H RWE+P +
Sbjct: 69  GPDIQLLSITASLESNDRLRVRITDAKHRRWEIPDN 104



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>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 913

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402
           GP +  L  TAS E D  LR+R TDA++ RWE+P +
Sbjct: 74  GPDIHFLSFTASFEEDDTLRIRFTDANNRRWEIPNE 109



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>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)|
          Length = 915

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 22/34 (64%)
 Frame = +1

Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           G  +  LRL    ETDSRLRV ITDA   RWEVP
Sbjct: 62  GSDITTLRLFVKHETDSRLRVHITDAKQQRWEVP 95



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>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1840

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           P+    G  ++ + LT   +T +R R +ITD ++ R+EVP
Sbjct: 143 PSPTLFGEDIKSVILTTQTQTGNRFRFKITDPNNKRYEVP 182



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>MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: Maltase (EC|
           3.2.1.20) (Alpha-glucosidase); Glucoamylase (EC 3.2.1.3)
           (Glucan 1,4-alpha-glucosidase)]
          Length = 1856

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 402
           P+    G  V  + LTA  +T +R   ++TD  + R+EVP +
Sbjct: 158 PSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHE 199



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>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1812

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           G  +  L LT   +T +R R +ITD ++ R+EVP
Sbjct: 124 GDNITNLLLTTQSQTANRFRFKITDPNNQRYEVP 157



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>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 295 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           G  +  + LT   +T +RLR ++TD ++ R+EVP
Sbjct: 139 GNDINNVLLTTESQTANRLRFKLTDPNNKRYEVP 172



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>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 277 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           P+    G  +  +  T   +T +R R +ITD ++ R+EVP
Sbjct: 133 PSPTLFGNDINSVLFTTQNQTPNRFRFKITDPNNRRYEVP 172



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>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid|
           maltase)
          Length = 953

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 304 VQRLRLTASLETDSRLRVRITDADHPRWEVP 396
           V  L+L   +ETDSRL  +I D    R+EVP
Sbjct: 164 VLTLQLEVLMETDSRLHFKIKDPASKRYEVP 194



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>CLPB_HAEIN (P44403) Chaperone clpB|
          Length = 856

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = -1

Query: 396 RHLPSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKRQLQPRRQSAPR 226
           R LP + + + D  A  ++R+E  S+ EPLD R ERR+ +    ++ LQ     A R
Sbjct: 384 RQLPDKAIDLID-EAASSIRMEIDSKPEPLD-RLERRIIQLKLEQQALQKEEDEASR 438



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>CLPB_HAEDU (Q7VNH1) Chaperone clpB|
          Length = 856

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = -1

Query: 396 RHLPSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKRQLQPRRQSAPR 226
           R LP + + + D  A  ++R+E  S+ EPLD + ERR+ +    ++ LQ  +  A R
Sbjct: 382 RQLPDKAIDLID-EAASSLRMEIDSKPEPLD-KLERRIIQLKLERQALQKEKDEASR 436



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>YADA1_YEREN (P31489) Adhesin yadA precursor|
          Length = 455

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 98  DGVAIGARAGKGSTGCAVQAQRKEPGRAS 12
           DGVAIGARA    TG AV    K   + S
Sbjct: 126 DGVAIGARASTSDTGVAVGFNSKADAKNS 154



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>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 387 PSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKR 259
           P R V V    A     L A +EA+    +P  R GR+  G+R
Sbjct: 174 PERPVQVASVLADSTTTLRAVAEAKQAKEKPPERGGRKRRGRR 216



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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 24.6 bits (52), Expect(2) = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -1

Query: 312 PLDTRPERRV---GRRLAGKRQLQPRRQSAPRLGRRHDVVPP 196
           P  TRP RR     R  + +R+  PRR+ +PR       +PP
Sbjct: 291 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP 332



 Score = 21.9 bits (45), Expect(2) = 5.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 100 RTASPSEHAQGRGAPGVRCRRSARSPAGPAN 8
           R   P  H + R +PG R RRS+ S +G ++
Sbjct: 329 RMPPPPRHRRSR-SPGRRRRRSSASLSGSSS 358



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>LYAG_HUMAN (P10253) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid|
           maltase) (Aglucosidase alfa) [Contains: 76 kDa lysosomal
           alpha-glucosidase; 70 kDa lysosomal alpha-glucosidase]
          Length = 952

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 313 LRLTASLETDSRLRVRITDADHPRWEVP 396
           LRL   +ET++RL   I D  + R+EVP
Sbjct: 167 LRLDVMMETENRLHFTIKDPANRRYEVP 194



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>YADA_YERPS (P10858) Adhesin yadA precursor|
          Length = 432

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -2

Query: 98  DGVAIGARAGKGSTGCAV 45
           DGVAIGARA    TG AV
Sbjct: 159 DGVAIGARASASDTGVAV 176



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>H11_VOLCA (Q08864) Histone H1-I|
          Length = 260

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 321 EAEPLDTRPERRVGRRLAGKRQLQPRRQSAPRLGRRHDVVPPAA 190
           +A P   +P++    + AGK++  P+ ++AP+   + D  P  A
Sbjct: 188 KATPKAEKPKKAATPKSAGKKKATPKPKAAPKSPAKKDAKPKKA 231



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>GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor PGR10)
          Length = 731

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 185 APAAGGTTSCRRPSRGAL 238
           APAA G  +CRR +RG L
Sbjct: 279 APAAAGAEACRRENRGTL 296


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,125,503
Number of Sequences: 219361
Number of extensions: 486467
Number of successful extensions: 2456
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2454
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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