>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
           (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/30 (66%), Positives = 20/30 (66%)
 Frame = +3

Query: 267 MLTATKPLVGGACXXXXXXXXXXTFVVPEA 356
           MLTATKPLVGGAC          TFVVPEA
Sbjct: 1   MLTATKPLVGGACAAPSSSARRRTFVVPEA 30

>SC10A_RAT (Q62968) Sodium channel protein type 10 alpha subunit (Sodium|
           channel protein type X alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.8) (Peripheral nerve
           sodium channel 3) (Sensory neuron sodium channel)
          Length = 1956

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
 Frame = +2

Query: 104 TQGSLSPTSDPSITSSFPD-LPGQGC----------TV*LGRNQPRRCNLPPHRVAQ*PT 250
           + GS+     PS   SFPD +   G           ++ LGR   +   LP   + Q P 
Sbjct: 499 SHGSVFHFRAPSQDISFPDGITDDGVFHGDQESRRGSILLGRGAGQTGPLPRSPLPQSPN 558

Query: 251 P*RTHDADGDQAASRGRVCRAVVVGPAEDVRGAR 352
           P R H  +G      G +      GPA D  G +
Sbjct: 559 PGRRHGEEGQLGVPTGELTAGAPEGPALDTTGQK 592

>ARG56_SCHPO (P31318) Protein arg11, mitochondrial precursor [Contains:|
           N-acetyl-gamma-glutamyl-phosphate reductase (EC
           1.2.1.38) (N-acetyl-glutamate semialdehyde
           dehydrogenase) (NAGSA dehydrogenase); Acetylglutamate
           kinase (EC 2.7.2.8) (NAG kinase) (AGK)
          Length = 885

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 66  YTYVGVFSSINRAPRAHSLRHQILPSPLPFLICQGRVAQSS*VETNQD 209
           Y YVG    +N+AP  HS+R       LP L      A    +  N D
Sbjct: 202 YKYVGKIVKVNKAPIEHSIR----AGTLPILTSMAETASGQLLNVNAD 245

>ACSA2_PSEPK (Q88DW6) Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA|
           ligase 2) (Acyl-activating enzyme 2)
          Length = 644

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 234 TRWGGRLHRLGWFRPS*TVQPCPGRSGKEEVMEGSDVGES 115
           T W  +  RL W +P  +VQ C   +GK    +G+ +  S
Sbjct: 37  TFWAEQAKRLDWIKPWSSVQQCDLHTGKARWFDGAQLNVS 76

>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -2

Query: 351 RAPRTSSAGPTTTARHTRPRLAAWSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*TVQP 172
           R+   S  G   + RH R R  +WS S S  R    Y  +R  GR H  G  R       
Sbjct: 378 RSSSRSRRGYYRSGRHARSRSRSWSRSRSRSR---RYSRSRSRGRRHSDGGSRDGHRYSR 434

Query: 171 CPGRSG 154
            P R G
Sbjct: 435 SPARRG 440

>DNAJ_RHILE (O33529) Chaperone protein dnaJ (Fragment)|
          Length = 234

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
 Frame = +3

Query: 78  GVFSSINRAPRAHSLRHQILPSPLPFLICQGRVAQSS*VETN-----QDGATFR 224
           G FS     P  H  R QI+P P P    QGRV +   +  N     +DG   R
Sbjct: 180 GFFSIERTCPTCHG-RGQIIPDPCPKCHGQGRVTEERSLSVNIPAGIEDGTRIR 232

>TBX21_MOUSE (Q9JKD8) T-box transcription factor TBX21 (T-box protein 21)|
           (Transcription factor TBLYM) (T-cell-specific T-box
           transcription factor T-bet)
          Length = 530

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = -2

Query: 336 SSAGPTTTARHTRPRLAAWSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*TVQPCPGRS 157
           S+ GPT      +  LA   P A W        A ++  ++   GWFRP  T+   PG  
Sbjct: 410 SAPGPTVPYYRGQDVLA---PGAGWP------VAPQYPPKMSPAGWFRPMRTLPMDPGLG 460

Query: 156 GKEE 145
             EE
Sbjct: 461 SSEE 464

>NIFU_AZOBR (Q43909) Nitrogen fixation protein nifU|
          Length = 310

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 342 RTSSAGPTTTARHTRPRLAAWSPSASWVR 256
           +T + GP      T P  + W+PS+ W R
Sbjct: 191 KTGAVGPAQAPSPTPPARSGWTPSSRWPR 219

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa)
          Length = 1200

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 357 EPRAPRTSSAGPTTTARHTRPRLAAWSPSA 268
           EPR PR  S+      RH RP L A  P A
Sbjct: 74  EPRGPRALSSFVRDARRHPRPALTASPPPA 103

>CHB4_ANTPO (P02847) Chorion class B protein PC401 precursor (Fragment)|
          Length = 171

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 276 PSASWVRYGVGYCATRWGGRLHRLG 202
           PSA  ++  VG C  RWG  L R G
Sbjct: 8   PSALMIQSAVGQCLGRWGPGLGRCG 32

>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = -2

Query: 351 RAPRTSSAGPTTTARHT---RPRLAAWSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*T 181
           R+PR  S  P+T +  T     R  A SP+    R   G      GGRL R G  R S +
Sbjct: 326 RSPRRRSRSPSTYSSCTTQRSQRARAESPTTRGARGSRGSRGGSRGGRLRRRG--RSSSS 383

Query: 180 VQPCPGRS-GKEEVMEGSDVGE 118
             P   RS G    + G   GE
Sbjct: 384 SSPAHKRSRGGSAKLRGVSPGE 405


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,171,356
Number of Sequences: 219361
Number of extensions: 1182105
Number of successful extensions: 2985
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2985
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)