ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocy... 171 7e-43
2SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8 36 0.034
3MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48) 33 0.22
4BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... 32 0.64
5BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc... 32 0.64
6NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p... 31 1.4
7NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4... 31 1.4
8BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa... 31 1.4
9BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc... 31 1.4
10FA84A_BOVIN (Q3ZCA1) Protein FAM84A 30 2.4
11VGLC_BHV1C (P14378) Glycoprotein GIII precursor 30 2.4
12RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1) 29 4.1
13REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP) 29 4.1
14RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2) 29 4.1
15IE18_PRVIF (P11675) Immediate-early protein IE180 29 5.4
16RS14_TORRU (Q9XEK6) 40S ribosomal protein S14 29 5.4
17RS14_SCHPO (O14150) 40S ribosomal protein S14 29 5.4
18RS14_CHLRE (P46295) 40S ribosomal protein S14 29 5.4
19RS143_ARATH (P42036) 40S ribosomal protein S14-3 29 5.4
20RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2 29 5.4
21RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1 29 5.4
22RS14_PROCL (P48855) 40S ribosomal protein S14 28 7.1
23PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain... 28 7.1
24Y875_METJA (Q58285) Hypothetical protein MJ0875 28 7.1
25RS14_CANAL (Q96W53) 40S ribosomal protein S14 28 7.1
26CD123_YEAST (Q05791) Cell division cycle protein 123 28 7.1
27FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1) 28 9.2
28RS14_DROME (P14130) 40S ribosomal protein S14 28 9.2
29BRSK2_HUMAN (Q8IWQ3) BR serine/threonine-protein kinase 2 (EC 2.... 28 9.2
30RS14_RAT (P13471) 40S ribosomal protein S14 28 9.2
31RS14_MOUSE (P62264) 40S ribosomal protein S14 28 9.2
32RS14_HUMAN (P62263) 40S ribosomal protein S14 28 9.2
33RS14_CRIGR (P62265) 40S ribosomal protein S14 28 9.2

>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
           component Sec8)
          Length = 1053

 Score =  171 bits (433), Expect = 7e-43
 Identities = 83/113 (73%), Positives = 95/113 (84%)
 Frame = +1

Query: 79  GIFDGPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 258
           GIF+G P+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I  LKEQSD++
Sbjct: 2   GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61

Query: 259 EDVVDEVVHAYHHGFNKAIQNYFHILRLFSESAESITGLKGEMAEAKSCLGGR 417
           E+VVDEVVHAYH GFNKAIQNY  ILRLFSES E I  LK ++AEAK  LG R
Sbjct: 62  EEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGAR 114



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>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8|
          Length = 1111

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +1

Query: 202 TSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYFHILRLFSESAESITGLKG 381
           +S  R  E +  ++    +++ +  +VH +H GFN +I  +  I      S + +  LK 
Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174

Query: 382 EMAEAKSCL 408
            +A +K+ L
Sbjct: 175 SLAASKTAL 183



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>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)|
          Length = 489

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
 Frame = +1

Query: 25  RLSPGPASPSVTMNRHRRGIFDGP---------PIPPDKSYLKEGLSRIDEGWAAARFDS 177
           ++SP P  PS++M R    I+  P         P    KS     +S++      + F  
Sbjct: 83  KVSPRPTPPSLSMRRSEASIYTLPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFSE 142

Query: 178 LPHV--VHILTSKDRDGEIQFLKEQSDLI 258
            PH+  VH L+ K +D +++ ++ +S  I
Sbjct: 143 KPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171



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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035



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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038



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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947



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>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947



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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039



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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036



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>FA84A_BOVIN (Q3ZCA1) Protein FAM84A|
          Length = 297

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 91  GPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L+  D     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295



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>VGLC_BHV1C (P14378) Glycoprotein GIII precursor|
          Length = 521

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
 Frame = +3

Query: 3   SPVSPDLAP---LPGSRLAVGNDEPP-------PAWHLRRPPNSARQILPEGRAVADRRG 152
           +P SPD  P    PG+   VG  EPP       P  +   PP       P G   A R G
Sbjct: 57  TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116

Query: 153 MGSG 164
             SG
Sbjct: 117 RPSG 120



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>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)|
          Length = 149

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TPV     RR+GG RG
Sbjct: 125 GRIEDVTPVPTDSTRRKGGRRG 146



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>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)|
          Length = 595

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 112 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKEQSDLIEDVVD 273
           ++Y+K G +R    W+    + L +V+H +    ++   DGE   +K+ S  IED  D
Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436



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>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)|
          Length = 150

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TPV     RR+GG RG
Sbjct: 126 GRIEDVTPVPTDSTRRKGGRRG 147



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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -3

Query: 173 SNRAAAHPSSIRDSPSFR*DLSGGIGGPSKMPRRWRFIVTD--GEAGPGER 27
           S+ +AA P+S     S     S G  GPS  PRRW     D  GE GP  R
Sbjct: 168 SSPSAASPASSSSGSSG----SSGSPGPSAAPRRWSPARGDPVGEPGPAAR 214



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>RS14_TORRU (Q9XEK6) 40S ribosomal protein S14|
          Length = 134

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 110 GRIEDVTPIPTDSTRRKGGRRG 131



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>RS14_SCHPO (O14150) 40S ribosomal protein S14|
          Length = 139

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 115 GRIEDVTPIPTDSTRRKGGRRG 136



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>RS14_CHLRE (P46295) 40S ribosomal protein S14|
          Length = 153

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 129 GRIEDVTPIPTDSTRRKGGRRG 150



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>RS143_ARATH (P42036) 40S ribosomal protein S14-3|
          Length = 150

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147



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>RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2|
          Length = 150

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147



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>RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1|
          Length = 150

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147



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>RS14_PROCL (P48855) 40S ribosomal protein S14|
          Length = 151

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TPV     RR+GG RG
Sbjct: 127 GRIEDVTPVPSDSTRRKGGRRG 148



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>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -1

Query: 151  PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 20
            PRRS    P+G +   E GG R C  G G     +  P++  D G  A+
Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565



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>Y875_METJA (Q58285) Hypothetical protein MJ0875|
          Length = 748

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 256 IEDVVDEVVHAYHHGFNKAIQNYFHILRLFSESA 357
           +E+V+DE  HA +  F + ++NY  I+  F+  A
Sbjct: 545 LEEVLDEFKHAAYREFYRLLENYLKIIVEFNAMA 578



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>RS14_CANAL (Q96W53) 40S ribosomal protein S14|
          Length = 134

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TPV     RR+GG RG
Sbjct: 110 GRIEDVTPVPSDSTRRKGGRRG 131



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>CD123_YEAST (Q05791) Cell division cycle protein 123|
          Length = 360

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 285
           HI+ +  RD     +L E SD  +D++DE+VH
Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237



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>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)|
          Length = 292

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 91  GPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L   +     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290



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>RS14_DROME (P14130) 40S ribosomal protein S14|
          Length = 151

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 127 GRIEDVTPIPSDSTRRKGGRRG 148



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>BRSK2_HUMAN (Q8IWQ3) BR serine/threonine-protein kinase 2 (EC 2.7.11.1)|
           (Serine/threonine-protein kinase 29) (SAD1B)
          Length = 736

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
 Frame = +1

Query: 61  MNRHRRGIFDGPP-IPPDKSYLKEGLSRIDEGWAAARFDSLPHV---VHILTSKD----- 213
           + + +RG+F  P  IPPD   L  G+S +D    AAR  +L H+   +  +  K+     
Sbjct: 225 LEKVKRGVFHMPHFIPPDCQSLLRGMSEVD----AARRLTLEHIQKHIWYIGGKNEPEPE 280

Query: 214 ----RDGEIQFLKEQSDLIEDVVDEV 279
               R  +I+ L    D+  DV+D +
Sbjct: 281 QPIPRKVQIRSLPSLEDIDPDVLDSM 306



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>RS14_RAT (P13471) 40S ribosomal protein S14|
          Length = 150

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147



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>RS14_MOUSE (P62264) 40S ribosomal protein S14|
          Length = 150

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147



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>RS14_HUMAN (P62263) 40S ribosomal protein S14|
          Length = 150

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147



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>RS14_CRIGR (P62265) 40S ribosomal protein S14|
          Length = 150

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 96  GAVEDATPVAVHRYRRRGGTRG 31
           G +ED TP+     RR+GG RG
Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,480,442
Number of Sequences: 219361
Number of extensions: 1274545
Number of successful extensions: 4985
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4979
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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