Clone Name | bastl09b03 |
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Clone Library Name | barley_pub |
>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex| component Sec8) Length = 1053 Score = 171 bits (433), Expect = 7e-43 Identities = 83/113 (73%), Positives = 95/113 (84%) Frame = +1 Query: 79 GIFDGPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 258 GIF+G P+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I LKEQSD++ Sbjct: 2 GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61 Query: 259 EDVVDEVVHAYHHGFNKAIQNYFHILRLFSESAESITGLKGEMAEAKSCLGGR 417 E+VVDEVVHAYH GFNKAIQNY ILRLFSES E I LK ++AEAK LG R Sbjct: 62 EEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGAR 114
>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8| Length = 1111 Score = 36.2 bits (82), Expect = 0.034 Identities = 17/69 (24%), Positives = 34/69 (49%) Frame = +1 Query: 202 TSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYFHILRLFSESAESITGLKG 381 +S R E + ++ +++ + +VH +H GFN +I + I S + + LK Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174 Query: 382 EMAEAKSCL 408 +A +K+ L Sbjct: 175 SLAASKTAL 183
>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)| Length = 489 Score = 33.5 bits (75), Expect = 0.22 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Frame = +1 Query: 25 RLSPGPASPSVTMNRHRRGIFDGP---------PIPPDKSYLKEGLSRIDEGWAAARFDS 177 ++SP P PS++M R I+ P P KS +S++ + F Sbjct: 83 KVSPRPTPPSLSMRRSEASIYTLPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFSE 142 Query: 178 LPHV--VHILTSKDRDGEIQFLKEQSDLI 258 PH+ VH L+ K +D +++ ++ +S I Sbjct: 143 KPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 32.0 bits (71), Expect = 0.64 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 6 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 32.0 bits (71), Expect = 0.64 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 6 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = +3 Query: 12 SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164 S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 895 SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = +3 Query: 12 SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164 S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 895 SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +3 Query: 6 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122 P +P AP P S L VG PP +R PP A ++LP Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +3 Query: 6 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122 P +P AP P S L VG PP +R PP A ++LP Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036
>FA84A_BOVIN (Q3ZCA1) Protein FAM84A| Length = 297 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +1 Query: 91 GPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264 G P + YLK L+ D ARF SL ++ D G ++ L+E +DL++D Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295
>VGLC_BHV1C (P14378) Glycoprotein GIII precursor| Length = 521 Score = 30.0 bits (66), Expect = 2.4 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Frame = +3 Query: 3 SPVSPDLAP---LPGSRLAVGNDEPP-------PAWHLRRPPNSARQILPEGRAVADRRG 152 +P SPD P PG+ VG EPP P + PP P G A R G Sbjct: 57 TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116 Query: 153 MGSG 164 SG Sbjct: 117 RPSG 120
>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)| Length = 149 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TPV RR+GG RG Sbjct: 125 GRIEDVTPVPTDSTRRKGGRRG 146
>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)| Length = 595 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 112 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKEQSDLIEDVVD 273 ++Y+K G +R W+ + L +V+H + ++ DGE +K+ S IED D Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436
>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)| Length = 150 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TPV RR+GG RG Sbjct: 126 GRIEDVTPVPTDSTRRKGGRRG 147
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = -3 Query: 173 SNRAAAHPSSIRDSPSFR*DLSGGIGGPSKMPRRWRFIVTD--GEAGPGER 27 S+ +AA P+S S S G GPS PRRW D GE GP R Sbjct: 168 SSPSAASPASSSSGSSG----SSGSPGPSAAPRRWSPARGDPVGEPGPAAR 214
>RS14_TORRU (Q9XEK6) 40S ribosomal protein S14| Length = 134 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 110 GRIEDVTPIPTDSTRRKGGRRG 131
>RS14_SCHPO (O14150) 40S ribosomal protein S14| Length = 139 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 115 GRIEDVTPIPTDSTRRKGGRRG 136
>RS14_CHLRE (P46295) 40S ribosomal protein S14| Length = 153 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 129 GRIEDVTPIPTDSTRRKGGRRG 150
>RS143_ARATH (P42036) 40S ribosomal protein S14-3| Length = 150 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147
>RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2| Length = 150 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147
>RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1| Length = 150 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPTDSTRRKGGRRG 147
>RS14_PROCL (P48855) 40S ribosomal protein S14| Length = 151 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TPV RR+GG RG Sbjct: 127 GRIEDVTPVPSDSTRRKGGRRG 148
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -1 Query: 151 PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 20 PRRS P+G + E GG R C G G + P++ D G A+ Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565
>Y875_METJA (Q58285) Hypothetical protein MJ0875| Length = 748 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +1 Query: 256 IEDVVDEVVHAYHHGFNKAIQNYFHILRLFSESA 357 +E+V+DE HA + F + ++NY I+ F+ A Sbjct: 545 LEEVLDEFKHAAYREFYRLLENYLKIIVEFNAMA 578
>RS14_CANAL (Q96W53) 40S ribosomal protein S14| Length = 134 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TPV RR+GG RG Sbjct: 110 GRIEDVTPVPSDSTRRKGGRRG 131
>CD123_YEAST (Q05791) Cell division cycle protein 123| Length = 360 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 193 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 285 HI+ + RD +L E SD +D++DE+VH Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237
>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)| Length = 292 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +1 Query: 91 GPPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264 G P + YLK L + ARF SL ++ D G ++ L+E +DL++D Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290
>RS14_DROME (P14130) 40S ribosomal protein S14| Length = 151 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 127 GRIEDVTPIPSDSTRRKGGRRG 148
>BRSK2_HUMAN (Q8IWQ3) BR serine/threonine-protein kinase 2 (EC 2.7.11.1)| (Serine/threonine-protein kinase 29) (SAD1B) Length = 736 Score = 28.1 bits (61), Expect = 9.2 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%) Frame = +1 Query: 61 MNRHRRGIFDGPP-IPPDKSYLKEGLSRIDEGWAAARFDSLPHV---VHILTSKD----- 213 + + +RG+F P IPPD L G+S +D AAR +L H+ + + K+ Sbjct: 225 LEKVKRGVFHMPHFIPPDCQSLLRGMSEVD----AARRLTLEHIQKHIWYIGGKNEPEPE 280 Query: 214 ----RDGEIQFLKEQSDLIEDVVDEV 279 R +I+ L D+ DV+D + Sbjct: 281 QPIPRKVQIRSLPSLEDIDPDVLDSM 306
>RS14_RAT (P13471) 40S ribosomal protein S14| Length = 150 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147
>RS14_MOUSE (P62264) 40S ribosomal protein S14| Length = 150 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147
>RS14_HUMAN (P62263) 40S ribosomal protein S14| Length = 150 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147
>RS14_CRIGR (P62265) 40S ribosomal protein S14| Length = 150 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 96 GAVEDATPVAVHRYRRRGGTRG 31 G +ED TP+ RR+GG RG Sbjct: 126 GRIEDVTPIPSDSTRRKGGRRG 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,480,442 Number of Sequences: 219361 Number of extensions: 1274545 Number of successful extensions: 4985 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4979 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)