ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481558.1| Oryza sativa (japonica cultivar-group), mRNA 470 e-129
2dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 333 3e-88
4dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic D... 333 3e-88
5ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
6ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
7ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
8ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
9ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
10ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
11ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
12ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
13ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.37
14gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.5
15gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
16dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
17gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, c... 42 1.5
18ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle be... 40 5.8
19gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 5.8
20gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.8
21ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (i... 40 5.8
22ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (incl... 40 5.8
23gb|AE009210.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 5.8
24gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome... 40 5.8
25gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosom... 40 5.8
26gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome... 40 5.8
27gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosom... 40 5.8
28gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome... 40 5.8
29gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, com... 40 5.8
30gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome... 40 5.8
31gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, compl... 40 5.8
32emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.8
33gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, co... 40 5.8
34gb|AY129435.1| Drosophila melanogaster LD01950 full insert cDNA 40 5.8
35gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell... 40 5.8
36gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell ... 40 5.8
37ref|NM_206372.1| Drosophila melanogaster CG7945-RC, transcript v... 40 5.8
38ref|NM_168624.1| Drosophila melanogaster CG7945-RA, transcript v... 40 5.8
39dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.8
40dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B... 40 5.8
41gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 5.8
42gb|AY061044.1| Drosophila melanogaster LD01461 full length cDNA 40 5.8
43emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in... 40 5.8
44gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194... 40 5.8
45dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 40 5.8
46gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 5.8
47emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-4... 40 5.8
48gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55... 40 5.8
49gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, com... 40 5.8
50gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.8
51emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 5.8
52dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocyt... 40 5.8
53emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2... 40 5.8
54gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds 40 5.8
55gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec... 40 5.8 
>ref|XM_481558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  470 bits (237), Expect = e-129
 Identities = 322/349 (92%), Gaps = 1/349 (0%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcatcttcgacggccccccaattccgccagacaaatcttacctgaaggaagggctgtcgc 139
           ||||||||||||||| ||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 26  gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 85

                                                                       
Query: 140 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 199
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 86  ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 145

                                                                       
Query: 200 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 259
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 205

                                                                       
Query: 260 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaaggccatacaga 319
           |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 206 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaaggccatccaga 265

                                                                       
Query: 320 actacttccatatcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagg 379
           |||||| ||| ||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 266 actactcccagatcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagg 325

                                                            
Query: 380 gggagatggcagaggccaa-aagctgcttgggaggaagaatcagcacct 427
           |||||||||| |||||||| || |||||||||||||||||  |||||||
Sbjct: 326 gggagatggccgaggccaagaaactgcttgggaggaagaacaagcacct 374
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>dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E23, full
           insert sequence
          Length = 3546

 Score =  470 bits (237), Expect = e-129
 Identities = 322/349 (92%), Gaps = 1/349 (0%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcatcttcgacggccccccaattccgccagacaaatcttacctgaaggaagggctgtcgc 139
           ||||||||||||||| ||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 111 gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 170

                                                                       
Query: 140 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 199
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 171 ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 230

                                                                       
Query: 200 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 259
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 290

                                                                       
Query: 260 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaaggccatacaga 319
           |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 291 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaaggccatccaga 350

                                                                       
Query: 320 actacttccatatcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagg 379
           |||||| ||| ||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 351 actactcccagatcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagg 410

                                                            
Query: 380 gggagatggcagaggccaa-aagctgcttgggaggaagaatcagcacct 427
           |||||||||| |||||||| || |||||||||||||||||  |||||||
Sbjct: 411 gggagatggccgaggccaagaaactgcttgggaggaagaacaagcacct 459
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  333 bits (168), Expect = 3e-88
 Identities = 198/208 (95%)
 Strand = Plus / Minus

                                                                            
Query: 118      tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 177
                ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 13758055 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 13757996

                                                                            
Query: 178      ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 237
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 13757995 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 13757936

                                                                            
Query: 238      aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 297
                |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 13757935 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 13757876

                                            
Query: 298      ggcttcaacaaggccatacagaactact 325
                ||||||||||||||||| ||||||||||
Sbjct: 13757875 ggcttcaacaaggccatccagaactact 13757848



 Score =  123 bits (62), Expect = 5e-25
 Identities = 90/98 (91%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                            
Query: 331      atcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagggggagatggca 390
                ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| 
Sbjct: 13757719 atcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagggggagatggcc 13757660

                                                      
Query: 391      gaggccaa-aagctgcttgggaggaagaatcagcacct 427
                |||||||| || |||||||||||||||||  |||||||
Sbjct: 13757659 gaggccaagaaactgcttgggaggaagaacaagcacct 13757622
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>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0406D01
          Length = 163932

 Score =  333 bits (168), Expect = 3e-88
 Identities = 198/208 (95%)
 Strand = Plus / Minus

                                                                         
Query: 118   tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 177
             ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 72124 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 72065

                                                                         
Query: 178   ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 237
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72064 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 72005

                                                                         
Query: 238   aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 297
             |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 72004 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 71945

                                         
Query: 298   ggcttcaacaaggccatacagaactact 325
             ||||||||||||||||| ||||||||||
Sbjct: 71944 ggcttcaacaaggccatccagaactact 71917



 Score =  123 bits (62), Expect = 5e-25
 Identities = 90/98 (91%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                         
Query: 331   atcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagggggagatggca 390
             ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| 
Sbjct: 71788 atcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagggggagatggcc 71729

                                                   
Query: 391   gaggccaa-aagctgcttgggaggaagaatcagcacct 427
             |||||||| || |||||||||||||||||  |||||||
Sbjct: 71728 gaggccaagaaactgcttgggaggaagaacaagcacct 71691
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>ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 3 (LOC490734), mRNA
          Length = 7482

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 1 (LOC490734), mRNA
          Length = 6473

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 10 (LOC490734), mRNA
          Length = 7497

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 9 (LOC490734), mRNA
          Length = 7587

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 8 (LOC490734), mRNA
          Length = 7488

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 7 (LOC490734), mRNA
          Length = 7494

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 6 (LOC490734), mRNA
          Length = 7434

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 5 (LOC490734), mRNA
          Length = 7692

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 430 tccagttcctcaaggagcagag 451
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>ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 4 (LOC490734), mRNA
          Length = 3721

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 318     gaactacttccatatcctgcg 338
               |||||||||||||||||||||
Sbjct: 4119991 gaactacttccatatcctgcg 4119971
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 258     cgaggacgtcgttgacgaggtcgtc 282
               |||||||||||| ||||||||||||
Sbjct: 4874049 cgaggacgtcgtggacgaggtcgtc 4874025
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 237     caaggagcagagcgacctcatcgaggacg 265
               |||||||||| ||| ||||||||||||||
Sbjct: 1077901 caaggagcagcgcgccctcatcgaggacg 1077929
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>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds
          Length = 5163

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 atcgaggacgtcgttgacgag 276
           |||||||||||||||||||||
Sbjct: 511 atcgaggacgtcgttgacgag 531
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>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin
           (LOC452970), mRNA
          Length = 7365

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 494 tccagttcctcaaggagcag 513
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2008732 ctcacctccatggaccgcgatggc 2008755
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 238     aaggagcagagcgacctcatcgag 261
               |||||||||||||||| |||||||
Sbjct: 1104154 aaggagcagagcgaccgcatcgag 1104177
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>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 1, mRNA
          Length = 10064

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
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>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 2, mRNA
          Length = 6695

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
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>gb|AE009210.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 236
            of 256 of the complete sequence
          Length = 10441

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  aactacttccatatcctgcg 338
            ||||||||||||||||||||
Sbjct: 7873 aactacttccatatcctgcg 7854
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>gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome 9, complete sequence
          Length = 176541

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    agacaaatcttacctgaaggaagg 131
              ||||| ||||||||||||||||||
Sbjct: 172864 agacacatcttacctgaaggaagg 172841
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>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence
          Length = 194892

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 372   cctcaagggggagatggcagaggccaaa 399
             ||||||||||||||| || |||||||||
Sbjct: 21805 cctcaagggggagatagctgaggccaaa 21778
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>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence
          Length = 190381

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    agctgcttgggaggaagaat 419
              ||||||||||||||||||||
Sbjct: 175530 agctgcttgggaggaagaat 175549
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>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence
          Length = 136592

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   agacaaatcttacctgaaggaagg 131
             ||||| ||||||||||||||||||
Sbjct: 63560 agacacatcttacctgaaggaagg 63537
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>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence
          Length = 193083

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    agctgcttgggaggaagaat 419
              ||||||||||||||||||||
Sbjct: 137153 agctgcttgggaggaagaat 137172
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>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence
          Length = 230218

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 372    cctcaagggggagatggcagaggccaaa 399
              ||||||||||||||| || |||||||||
Sbjct: 117851 cctcaagggggagatagctgaggccaaa 117878
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>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence
          Length = 184855

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    agctgcttgggaggaagaat 419
              ||||||||||||||||||||
Sbjct: 182427 agctgcttgggaggaagaat 182408
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>gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, complete sequence
          Length = 239452

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 398   aaagctgcttgggaggaagaatcagcac 425
             |||||||||||||||| ||| |||||||
Sbjct: 33092 aaagctgcttgggaggcagagtcagcac 33065
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cgtcgttgacgaggtcgtcc 283
              ||||||||||||||||||||
Sbjct: 232835 cgtcgttgacgaggtcgtcc 232816
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>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence
          Length = 172626

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tccagttcctcaaggagcag 246
              ||||||||||||||||||||
Sbjct: 108238 tccagttcctcaaggagcag 108257
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>gb|AY129435.1| Drosophila melanogaster LD01950 full insert cDNA
          Length = 3609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 acttccatatcctgcggctg 342
           ||||||||||||||||||||
Sbjct: 896 acttccatatcctgcggctg 877
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>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 132655

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    acttccatatcctgcggctg 342
              ||||||||||||||||||||
Sbjct: 101256 acttccatatcctgcggctg 101275
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>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 162402

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   acttccatatcctgcggctg 342
             ||||||||||||||||||||
Sbjct: 20965 acttccatatcctgcggctg 20984
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>ref|NM_206372.1| Drosophila melanogaster CG7945-RC, transcript variant C (CG7945),
           mRNA
          Length = 3564

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 acttccatatcctgcggctg 342
           ||||||||||||||||||||
Sbjct: 894 acttccatatcctgcggctg 875
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>ref|NM_168624.1| Drosophila melanogaster CG7945-RA, transcript variant A (CG7945),
           mRNA
          Length = 1415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 acttccatatcctgcggctg 342
           ||||||||||||||||||||
Sbjct: 517 acttccatatcctgcggctg 498
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     taccaccatggcttcaacaa 308
               ||||||||||||||||||||
Sbjct: 3021626 taccaccatggcttcaacaa 3021607
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>dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B, partial cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 259 gaggacgtcgttgacgaggtcgtc 282
           ||||||||||| ||||||||||||
Sbjct: 316 gaggacgtcgtcgacgaggtcgtc 339
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     aactacttccatatcctgcg 338
               ||||||||||||||||||||
Sbjct: 2619846 aactacttccatatcctgcg 2619827
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>gb|AY061044.1| Drosophila melanogaster LD01461 full length cDNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 acttccatatcctgcggctg 342
           ||||||||||||||||||||
Sbjct: 527 acttccatatcctgcggctg 508
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>emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in linkage group 12,
             complete sequence
          Length = 171920

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gggagatggcagaggccaaa 399
             ||||||||||||||||||||
Sbjct: 97266 gggagatggcagaggccaaa 97247
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>gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194 of 195 of the
           complete sequence
          Length = 10552

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 199 ctcacctccaaggaccgcgatggc 222
           |||||||||| |||||||||||||
Sbjct: 351 ctcacctccatggaccgcgatggc 328
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     ccatggcttcaacaaggcca 313
               ||||||||||||||||||||
Sbjct: 3095312 ccatggcttcaacaaggcca 3095293
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2025391 ctcacctccatggaccgcgatggc 2025414
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>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171030

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   tccagttcctcaaggagcag 246
             ||||||||||||||||||||
Sbjct: 30244 tccagttcctcaaggagcag 30263
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>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete
             sequence
          Length = 279152

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   acttccatatcctgcggctg 342
             ||||||||||||||||||||
Sbjct: 33997 acttccatatcctgcggctg 34016
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>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence
          Length = 207069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cttcaacaaggccatacaga 319
              ||||||||||||||||||||
Sbjct: 184976 cttcaacaaggccatacaga 184957
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 241   gagcagagcgacctcatcgaggacgtcg 268
             |||||||||| | |||||||||||||||
Sbjct: 62180 gagcagagcggcttcatcgaggacgtcg 62153
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2022510 ctcacctccatggaccgcgatggc 2022533
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>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes
           spherocytosis, clinical type I) variant protein
          Length = 7481

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 502 tccagttcctcaaggagcag 521
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>emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2300N4 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 118332

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tccagttcctcaaggagcag 246
              ||||||||||||||||||||
Sbjct: 114819 tccagttcctcaaggagcag 114838
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>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds
          Length = 6765

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 454 tccagttcctcaaggagcag 473
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>gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec.4 exon sequence
          Length = 348

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 125 tccagttcctcaaggagcag 144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,973,237
Number of Sequences: 3902068
Number of extensions: 2973237
Number of successful extensions: 70439
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69917
Number of HSP's gapped (non-prelim): 518
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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