ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 54 1e-07
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 39 0.004
3MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12)... 28 4.9

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 29/45 (64%), Positives = 29/45 (64%)
 Frame = +2

Query: 89  MAAAAGDVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRL 223
           MAAAAGDVEAFL                VLERLEAPATRAEARRL
Sbjct: 1   MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAPATRAEARRL 45



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>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1091

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 24/48 (50%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 89  MAAAAG---DVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRL 223
           MAA AG   DV+AFL                VLERL APATR  ARRL
Sbjct: 1   MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAPATRPAARRL 48



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>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1088

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 104 GDVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEAR 217
           G ++ FL                +LERLE P TR EAR
Sbjct: 9   GSIDEFLNHCSQSGDSAYSALRSLLERLEKPDTRTEAR 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.130    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,800,095
Number of Sequences: 219361
Number of extensions: 204026
Number of successful extensions: 717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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