Clone Information

BLAST Search Result

Clone Name	bastl09a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-...	35	0.062
2	PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allel...	33	0.23
3	TCOF_MOUSE (O08784) Treacle protein (Treacher Collins syndrome p...	32	0.40
4	DOS_HUMAN (Q8N350) Protein Dos	32	0.52
5	RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase rad...	32	0.52
6	IF2_STRAW (Q82K53) Translation initiation factor IF-2	32	0.52
7	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	32	0.52
8	RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)	32	0.52
9	HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) ...	31	0.89
10	ZN592_HUMAN (Q92610) Zinc finger protein 592	30	1.2
11	ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I...	30	1.2
12	MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (...	30	1.2
13	ZCPW1_MOUSE (Q6IR42) Zinc finger CW-type PWWP domain protein 1 h...	30	1.5
14	TTBK2_MOUSE (Q3UVR3) Tau-tubulin kinase 2	30	1.5
15	PGKH_VOLCA (Q9SBN4) Phosphoglycerate kinase, chloroplast precurs...	30	1.5
16	PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precur...	30	1.5
17	HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) ...	30	2.0
18	CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)	30	2.0
19	PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allel...	30	2.0
20	HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) ...	30	2.0
21	EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimul...	30	2.0
22	PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allel...	30	2.0
23	GAG_GALV (P21416) Gag polyprotein [Contains: Core protein p15; C...	29	2.6
24	COLI_RAT (P01194) Corticotropin-lipotropin precursor (Pro-opiome...	29	2.6
25	YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'regio...	29	2.6
26	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	29	2.6
27	V_SENDH (P69280) Protein V	29	2.6
28	V_SENDF (P69284) Protein V	29	2.6
29	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	29	3.4
30	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	29	3.4
31	BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-contai...	29	3.4
32	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	29	3.4
33	SMRD3_HUMAN (Q6STE5) SWI/SNF-related matrix-associated actin-dep...	28	4.4
34	EFS_MOUSE (Q64355) Embryonal Fyn-associated substrate (SRC-inter...	28	4.4
35	TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)	28	4.4
36	EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulat...	28	4.4
37	TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.2...	28	4.4
38	UL24_HHV11 (P10208) Protein UL24	28	4.4
39	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	28	4.4
40	PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (P...	28	5.8
41	PKNB_MYCTU (P0A5S4) Probable serine/threonine-protein kinase pkn...	28	5.8
42	PKNB_MYCBO (P0A5S5) Probable serine/threonine-protein kinase pkn...	28	5.8
43	IF2_MYCTU (P65131) Translation initiation factor IF-2	28	5.8
44	IF2_MYCBO (P65132) Translation initiation factor IF-2	28	5.8
45	SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)	28	5.8
46	CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor	28	5.8
47	SMRD3_MOUSE (Q6P9Z1) SWI/SNF-related matrix-associated actin-dep...	28	5.8
48	CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite...	28	5.8
49	PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precur...	28	5.8
50	COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-...	28	5.8
51	OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinas...	28	5.8
52	MUTL_RHILO (Q983L2) DNA mismatch repair protein mutL	28	5.8
53	SYN1_RAT (P09951) Synapsin-1 (Synapsin I)	28	5.8
54	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	28	5.8
55	IF2_BRUME (Q8YEB3) Translation initiation factor IF-2	28	5.8
56	IF2_BRUAB (Q57AA0) Translation initiation factor IF-2	28	5.8
57	IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2	28	5.8
58	IR01_HCMVA (P09710) Hypothetical protein HKLF1 (IRL1) (TRL1)	28	5.8
59	PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Saliv...	28	7.5
60	FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear fa...	28	7.5
61	RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3	28	7.5
62	BSN_MOUSE (O88737) Bassoon protein	28	7.5
63	SURE1_BURS3 (Q390V3) 5'-nucleotidase surE 1 (EC 3.1.3.5) (Nucleo...	28	7.5
64	VE2_BPV3 (Q8BDD6) Regulatory protein E2	28	7.5
65	HYP1_PISTI (P52748) Hydrophobin-1 precursor	28	7.5
66	EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimul...	28	7.5
67	MSA2_PLAFK (Q03643) Merozoite surface antigen 2 precursor (MSA-2)	28	7.5
68	BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dep...	28	7.5
69	YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11	28	7.5
70	RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1	28	7.5
71	GAG_WMSV (P03330) Gag polyprotein [Contains: Core protein p15; I...	28	7.5
72	STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1...	28	7.5
73	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	28	7.5
74	RB6I2_HUMAN (Q8IUD2) RAB6-interacting protein 2 (ERC protein 1)	28	7.5
75	RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis pro...	27	9.9
76	EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimul...	27	9.9
77	KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C	27	9.9
78	ZEP2_RAT (Q00900) Human immunodeficiency virus type I enhancer-b...	27	9.9
79	SPT6H_DROME (Q9W420) Transcription elongation factor SPT6	27	9.9
80	SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-li...	27	9.9
81	VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Pro...	27	9.9
82	SOS1_HUMAN (Q07889) Son of sevenless homolog 1 (SOS-1)	27	9.9
83	CT055_HUMAN (Q9BQ89) Protein C20orf55	27	9.9
84	HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)	27	9.9
85	SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)	27	9.9
86	PRDM6_HUMAN (Q9NQX0) PR domain zinc finger protein 6 (PR domain-...	27	9.9
87	V_SENDA (Q9DUE1) Protein V	27	9.9

>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing|
           protein 2
          Length = 153

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 24/76 (31%), Positives = 29/76 (38%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAP 127
           A  R PAA  PA  +P   G P  +PR     +   TT AG           G   G   
Sbjct: 25  APRRAPAAQPPAAAAPSAVGSPAAAPRQPGLMAQMATTAAGVAV--------GSAVGHTL 76

Query: 126 DSAESGGFEAMREADP 79
             A +GGF     A+P
Sbjct: 77  GHAITGGFSGGGSAEP 92

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>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor|
           (Salivary proline-rich protein Po) (Parotid o protein)
           [Contains: Protein N1; Glycosylated protein A]
          Length = 247

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGP---ECRSIRGPPAGQAPDS 121
           P     +   PPH G+P G P     +S    +  G   GP   E    +GPP    P  
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG 205

Query: 120 AESGGFEAMREADP 79
               G    +  DP
Sbjct: 206 PPPAGGNPQQPQDP 219

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>TCOF_MOUSE (O08784) Treacle protein (Treacher Collins syndrome protein|
           homolog)
          Length = 1320

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = -2

Query: 312 NPAVNRTP-AAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAG 136
           NP   +TP A+A    ++ P  G+P     T   R       AG    P  ++ +GP AG
Sbjct: 693 NPPPTKTPPASASGKAVAAPTKGKPPVPNSTVSARGQRSVPAAGKAGAPATQAQKGPVAG 752

Query: 135 QAPDSAESGGFEAMREAD 82
              DS  S   E+  E +
Sbjct: 753 TGEDSESSSKEESDSEEE 770

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>DOS_HUMAN (Q8N350) Protein Dos|
          Length = 725

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
 Frame = -2

Query: 312 NPAVNRTPAAARPANLSPPHA------GRPHGSPRTGHRRSPCL----TTRAGACTGPEC 163
           +P  + TPAAAR    + PHA      GR H  P  G R +P L       AGA      
Sbjct: 577 DPHFDDTPAAARHRARAHPHARKQWQRGRQHSDP--GARAAPALAGTPAPPAGAARPARA 634

Query: 162 RSIRGPPAGQAPDSAESGG 106
              RG      PD    GG
Sbjct: 635 PLRRGDSVDGPPDGRTLGG 653

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>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase radical fringe|
           (EC 2.4.1.222) (O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase)
          Length = 372

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTG----PECRSIRGPPA 139
           A  R P  A P+  SP    RP GS   G R         G        P  R   GPP 
Sbjct: 35  APRRRPPPAGPSRPSPKREARPAGSDVPGDRGGGSGAAGGGRGVAGSPWPSRRVRMGPPG 94

Query: 138 GQAPDSAE 115
           G A +S E
Sbjct: 95  GSAKESLE 102

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 25/78 (32%), Positives = 31/78 (39%)
 Frame = -2

Query: 309 PAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQA 130
           P   +  AA RPA    P A      PR G + +P     A A   PE  +   P A  A
Sbjct: 84  PPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTA--PPSAPAA 141

Query: 129 PDSAESGGFEAMREADPE 76
           P +A SG     R   P+
Sbjct: 142 PAAAASGPRPGARPGAPK 159

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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
 Frame = +2

Query: 8   IPARAHERGERSG*KTQTKSPQNSGSASRIASKPPDSAESG-----ACPAGGPRIDRHSG 172
           I  R H  G+R+  + + K+P+   +A+   +  P+ AE       A PA  P  + H+ 
Sbjct: 69  IVRRRHRDGDRASARAEAKAPEQEATAAMPETSAPERAEEADKPAVAKPAKAPETEAHAR 128

Query: 173 PVHAP------ALVVRHGDLRWPV 226
               P      A ++R  D   PV
Sbjct: 129 ARKEPQAEPVKARIIRRPDEPAPV 152

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>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)|
          Length = 704

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPEC-----RSIR 151
           + P     PAA  PA   P H  R      T  RR P      G  TGP+      R   
Sbjct: 179 QQPVSEPVPAAPEPATPEPKHPARAPTRGDTEDRRGP------GQKTGPDMTSAPGRGSY 232

Query: 150 GPPAGQAPDSAESGGFEAMREADPEFWGLLVWVF*PLRSPLSCARA 13
           GPP  +A ++  S    + R++D    G  +    P +SP    RA
Sbjct: 233 GPPVRRASEARMS---SSGRDSDSWDQGHGMAAGDPSQSPAGLRRA 275

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>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
            protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1;
            HCF N-terminal chain 2; HCF N-terminal chain 3; HCF
            N-terminal chain 4; HCF N-terminal chain 5; HCF
            N-terminal chain
          Length = 2035

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 23/82 (28%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
 Frame = +2

Query: 11   PARAHERGERSG*KTQTKSPQNSGSASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPA 190
            P   HE G      T T +  N+GSA R+ S PP                  +G  H   
Sbjct: 1293 PCETHETGT-----TNTATTSNAGSAQRVCSNPPCET-------------HETGTTHTAT 1334

Query: 191  LVVRHGDLRWPVRGL--PCGRP 250
                +G    P  G   P GRP
Sbjct: 1335 TATSNGGTGQPEGGQQPPAGRP 1356

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>ZN592_HUMAN (Q92610) Zinc finger protein 592|
          Length = 1267

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAP 127
           A +  P    P     P AG   GSP+ G R+     T+A   + P C S    P G AP
Sbjct: 417 APSEMPGDEVPVEEHFPEAGTNSGSPQ-GARKGDESMTKASDSSSPSCSSGPRVPKGAAP 475

Query: 126 DS 121
            S
Sbjct: 476 GS 477

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>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -2

Query: 261 PPHAGRPHGSPRTGHRRSPCLT--TRAGACTGPECRSIRGPPAGQAPDSAESGGFEAMRE 88
           PP A  P  +PR G   S   +   R  A   P    +R PP G  P +   G   A R 
Sbjct: 375 PPAAPMPGSAPRPGPPASAAASGPARPRAAVAP---CVRAPPPGPGPRAPAPGAEPAARP 431

Query: 87  AD 82
           AD
Sbjct: 432 AD 433

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>MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (Mbn(83))|
          Length = 653

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = -2

Query: 318 LKNPAVNRTPAAARPANLS--PPHAGRPHGSPRTGHRRSPCLT-TRAGACTGPECRSIRG 148
           LKN   +   +A   AN    PPH   PH +P      +P ++   A   TG    +  G
Sbjct: 369 LKNINRSGVSSAKTLANTKTRPPHTFNPHQTPLLSSATAPGISGVTANTPTGNVPSNGGG 428

Query: 147 PPAGQAPDSAESGG 106
             AG+AP + ++GG
Sbjct: 429 IAAGKAPGNPQAGG 442

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>ZCPW1_MOUSE (Q6IR42) Zinc finger CW-type PWWP domain protein 1 homolog|
          Length = 630

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
 Frame = +2

Query: 50  KTQTKSPQNSGSASRIASK---------PPDSAESGACPAGGPRIDRHSGPVHAPA 190
           K + K+P+N  SA+ ++ +         P  SA+ GACP G   +  H  P    A
Sbjct: 529 KKKFKAPENKTSATNLSEEKEIKIVSKCPTPSAQHGACPLGKEGLVPHMPPTQEAA 584

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>TTBK2_MOUSE (Q3UVR3) Tau-tubulin kinase 2|
          Length = 1243

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 17/77 (22%)
 Frame = -2

Query: 315  KNPAV-NRTPAAA-------RPANLSPPHAGRPH-----GSPRTGHRRSP----CLTTRA 187
            K+P V  R+P+A+       R ++ SP  AGRPH      SP  G  +SP      ++  
Sbjct: 1141 KSPVVPRRSPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSR 1200

Query: 186  GACTGPECRSIRGPPAG 136
             +C    C+  +  P G
Sbjct: 1201 RSCQQEHCKPSKNGPKG 1217

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>PGKH_VOLCA (Q9SBN4) Phosphoglycerate kinase, chloroplast precursor (EC|
           2.7.2.3)
          Length = 462

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
 Frame = -2

Query: 255 HAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIR---GPPAGQAPDSAESGG------- 106
           H GRP G P   +R +P +  R     G E + +    GP   QA  S +SG        
Sbjct: 124 HLGRPKGGPEDKYRLTP-VVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENV 182

Query: 105 --FEAMREADPEF 73
             ++   + DPEF
Sbjct: 183 RFYKEEEKNDPEF 195

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>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid|
           salivary glycoprotein G1) (Proline-rich protein G1)
          Length = 309

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECR---SIRGPP 142
           P     +   PPH G+P G P  G  +S     R G   GP  +     +GPP
Sbjct: 125 PQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 177



 Score = 28.9 bits (63), Expect = 3.4
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECR---SIRGPP--AGQAP 127
           P     +   PP  G+P G P  G  +S     R G   GP  +     +GPP   G+  
Sbjct: 167 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 226

Query: 126 DSAESGG 106
            S   GG
Sbjct: 227 GSPSQGG 233



 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/74 (28%), Positives = 24/74 (32%)
 Frame = -2

Query: 297 RTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSA 118
           R P     +   PP  G+P G P  G  +S           GP  R   G P GQ P   
Sbjct: 39  RPPQGGNQSQGPPPRPGKPEGPPPQGGNQS----------QGPPPRP--GKPEGQPPQGG 86

Query: 117 ESGGFEAMREADPE 76
                   R   PE
Sbjct: 87  NQSQGPPPRPGKPE 100



 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECR---SIRGPP 142
           P     +   PP  G+P G P  G  +S     R G   GP  +     +GPP
Sbjct: 62  PQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 114

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>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
            protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF
            N-terminal chain 2; HCF N-terminal chain 3; HCF
            N-terminal chain 4; HCF N-terminal chain 5; HCF
            N-terminal chain 6; HCF
          Length = 2090

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11   PARAHERGERSG*KTQTKSPQNSGSASRIASKPP-DSAESG 130
            P   HE G      T T +  N+GSA R+ S PP ++ E+G
Sbjct: 1302 PCETHETGT-----TNTATTSNAGSAQRVCSNPPCETHETG 1337

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>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)|
          Length = 1655

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -2

Query: 288 AAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESG 109
           +AA P + +PP +  P GS       SPC +        P  ++ R    G A D  ++G
Sbjct: 395 SAAPPGSAAPPGSAAPPGSAAPHSFHSPCASAPPHPGLNPRIQAARFRFQGNANDPDQNG 454

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>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 276

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGP---ECRSIRG-PPAGQAPD 124
           P     +   PPH G+P G P     +S    +  G   GP   E    +G PP G+   
Sbjct: 175 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG 234

Query: 123 SAESGGFEAMREADP 79
               GG     +A P
Sbjct: 235 PPPPGGNPQQPQAPP 249

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>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
            N-terminal chain 1; HCF N-terminal chain 2; HCF
            N-terminal chain 3; HCF N-terminal chain 4; HCF
            N-terminal chain 5; HCF N-terminal chain 6; HCF
            C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11   PARAHERGERSG*KTQTKSPQNSGSASRIASKPP-DSAESG 130
            P   HE G      T T +  N+GSA R+ S PP ++ E+G
Sbjct: 1302 PCETHETGT-----TNTATTSNAGSAQRVCSNPPCETHETG 1337

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>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 422

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +2

Query: 14  ARAHERGERSG*KTQTKSPQNSGS-ASRIASKPPDSAESGACP 139
           +++ +  E+   ++QT+ P  S S  +R AS+PP+S+E+G  P
Sbjct: 289 SQSDKPAEKKEDESQTEDPSTSPSPGTRAASQPPNSSEAGRKP 331

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>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 238

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGP---ECRSIRG-PPAGQAPD 124
           P     +   PPH G+P G P     +S    +  G   GP   E    +G PP G+   
Sbjct: 137 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG 196

Query: 123 SAESGGFEAMREADP 79
               GG     +A P
Sbjct: 197 PPPPGGNPQQPQAPP 211

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>GAG_GALV (P21416) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 519

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
 Frame = -2

Query: 291 PAAARPANLSP---PHAGRPHGSPRTGHRRS---------PCLTTRAGACTGPECRSIRG 148
           PA+A+ A +S    P AGRP   PR     +         P       A   P      G
Sbjct: 96  PASAKVAVVSDTRRPVAGRPSAPPRPPIYPATDDLLLLSEPTPPPYPAALPPPLAPQAIG 155

Query: 147 PPAGQAPDSAESGG 106
           PP+GQ PDS++  G
Sbjct: 156 PPSGQMPDSSDPEG 169

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>COLI_RAT (P01194) Corticotropin-lipotropin precursor (Pro-opiomelanocortin)|
           (POMC) [Contains: NPP; Melanotropin gamma (Gamma-MSH);
           Corticotropin (Adrenocorticotropic hormone) (ACTH);
           Melanotropin alpha (Alpha-MSH); Corticotropin-like
           intermediary peptide
          Length = 235

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = -2

Query: 249 GRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESGGFEAMREADPE 76
           GRP  SPR G R       R G   G + R ++  P     +SAE+   E  RE + E
Sbjct: 112 GRPEPSPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNVAENESAEAFPLEFKRELEGE 169

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>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
 Frame = -2

Query: 285 AARPANLSPPHAGRPHGSPRTGHRRSPCLTTR------AGACTGPECRSIRGPPAGQAPD 124
           A RP    PP  GR  G+ R   R++P    R      A    GP  R  R PP  +   
Sbjct: 166 AGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRGPDEDQAREFRGPRHRRERHPPTARDVL 225

Query: 123 SAESG 109
             E G
Sbjct: 226 RGEPG 230

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 21/110 (19%)
 Frame = -2

Query: 321 RLKNPAVNR--TPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGP------- 169
           R   P  +R  +PAAA+P   SP  A +P   P     R P   T  G   GP       
Sbjct: 538 RPSTPKTSRAVSPAAAQPP--SPSSAEKPGDEPGRPRSRGPAGRTEPGE--GPQQEVRRR 593

Query: 168 ------------ECRSIRGPPAGQAPDSAESGGFEAMREADPEFWGLLVW 55
                       ECRS   PPA   P++         RE   +    L W
Sbjct: 594 DQFPLTRSRAIQECRSPVPPPAADPPEARTKAPPGRKREPPAQAVRFLPW 643

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>V_SENDH (P69280) Protein V|
          Length = 384

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAG-----ACTGPECRSIR 151
           + P +     +  PAN  P H G    S + GHRR   +  R G     +   P C  IR
Sbjct: 286 RKPPIGTRSVSDCPANGRPIHPGLESDSTKKGHRREHIIYERDGYIVDESWCNPVCSRIR 345

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>V_SENDF (P69284) Protein V|
          Length = 384

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAG-----ACTGPECRSIR 151
           + P +     +  PAN  P H G    S + GHRR   +  R G     +   P C  IR
Sbjct: 286 RKPPIGTRSVSDCPANGRPIHPGLETDSTKKGHRREHIIYERDGYIVDESWCNPVCSRIR 345

Query: 150 GPP 142
             P
Sbjct: 346 VIP 348

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 11/72 (15%)
 Frame = -2

Query: 309 PAVNRT-PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTR----------AGACTGPEC 163
           PA   T PAAA PA  SPP    P G P  G  + P  T             G    P  
Sbjct: 296 PAPTATVPAAAAPAAASPPPPQAPFGFPGDG-MQQPAYTQHQNMDQFQPRMMGIQQDPMH 354

Query: 162 RSIRGPPAGQAP 127
             +  PP GQ P
Sbjct: 355 HQVPLPPNGQMP 366

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Hyperpolarization-activated
            cation channel 4) (HAC-4)
          Length = 1175

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = -2

Query: 276  PANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTG--PECRSIRGPPA--GQAP 127
            P  LSP     P G+P T  R+   L   AGA  G  P   S RG P+  G +P
Sbjct: 960  PGELSPGLGSGPPGTPETPPRQPERLPFAAGASAGASPVAFSPRGGPSPPGHSP 1013

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>BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-containing protein 1)|
            (BR140 protein)
          Length = 1214

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +2

Query: 20   AHERGERSG*KTQTKSPQNSGSASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPALVV 199
            AHE G R+      K+P+ +G   R   +PP + ES   P+ G        PV  P L +
Sbjct: 883  AHEVGRRTSVLFSKKNPKTAGPPKR-PGRPPKNRESQMTPSHG------GSPVGPPQLPI 935

Query: 200  RHGDLRWPVRG 232
                LR   RG
Sbjct: 936  M-SSLRQRKRG 945

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>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 321 RLKNPAVNRTPAAARPANLSPPHAGRPHGSPRTGH 217
           R+    ++R P      +  PPH   PHG P  GH
Sbjct: 319 RISVNIIHRPPPHGHHPHGPPPHGHHPHGPPPHGH 353



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGH 217
           P    P +  PPH   PHG P  GH
Sbjct: 378 PPHGHPPHGPPPHGHPPHGPPPHGH 402



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGH 217
           P    P +  PPH   PHG P  GH
Sbjct: 368 PPHGHPPHGPPPHGHPPHGPPPHGH 392



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGH 217
           P    P +  PPH   PHG P  GH
Sbjct: 358 PPPRHPPHGPPPHGHPPHGPPPHGH 382



 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 309 PAVNRTPAAARPANLSPPHAGRPHGSPRTGH 217
           P  +  P    P +  PPH   PHG P  GH
Sbjct: 377 PPPHGHPPHGPPPHGHPPHGPPPHGHPPHGH 407

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>SMRD3_HUMAN (Q6STE5) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily D member 3 (60 kDa
           BRG-1/Brm-associated factor subunit C) (BRG1-associated
           factor 60C)
          Length = 483

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -2

Query: 276 PANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESGG 106
           P+    PH G P G P + +  SP +            R    PP GQ+   A+S G
Sbjct: 31  PSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQS--QAQSQG 85

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>EFS_MOUSE (Q64355) Embryonal Fyn-associated substrate (SRC-interacting|
           protein) (Signal-integrating protein)
          Length = 560

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRS----------PCLTTRAGACT--GPEC 163
           +++R P  A P + +P  A  P  SP  G + S          PCL    G      PEC
Sbjct: 300 SLSRRPLPALPVSEAP--APSPAPSPAPGRKGSIQDRPLPPPPPCLPGYGGLKPEGDPEC 357

Query: 162 RSIRGPPAG 136
           R +   PAG
Sbjct: 358 REVANDPAG 366

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>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 13/50 (26%)
 Frame = -2

Query: 315  KNPAV-NRTPAAA-------RPANLSPPHAGRPH-----GSPRTGHRRSP 205
            K+P V  R+P+A+       R ++ SP  AGRPH      SP  G  +SP
Sbjct: 1142 KSPVVPRRSPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSSPHLGRSKSP 1191

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>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 393

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  ERSG*KTQTKSPQNSGS-ASRIASKPPDSAESGACP 139
           +R   + QT+ P  S S  SR  S+PP+S+E+G  P
Sbjct: 288 DRKEDENQTEDPSTSPSPGSRATSQPPNSSEAGRKP 323

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>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 23/84 (27%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
 Frame = -2

Query: 297 RTPAAARPANLSPPHAGRPHGSP------RTGHRRSPCLTTRAGACTGPECRSIRGPPAG 136
           RTP  A PA   PP A     SP      R+   RS    + +   +      +R  P G
Sbjct: 45  RTPPQASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVG 104

Query: 135 QAPDSAESGGFEAMREADPEFWGL 64
             P  A          A  E  GL
Sbjct: 105 AVPIRASPARSAPATRATRESPGL 128

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>UL24_HHV11 (P10208) Protein UL24|
          Length = 269

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -2

Query: 252 AGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESGG 106
           A R  G    G    P   + +GA   PE  + + PPA Q P S E GG
Sbjct: 198 ARRRRGGAARGSASRP-KRSHSGARDPPESAARQLPPADQTPTSTEGGG 245

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 22/62 (35%), Positives = 24/62 (38%)
 Frame = -2

Query: 294 TPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAE 115
           T AA RP         RP G PR G    P    R+GA      R  +G P GQ P    
Sbjct: 193 TGAADRPGPRPGGGGPRPGGGPRPGGAPRPQGGQRSGA-----PRDGQGGPRGQRPGPGS 247

Query: 114 SG 109
            G
Sbjct: 248 GG 249

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>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/51 (33%), Positives = 18/51 (35%)
 Frame = -2

Query: 261 PPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESG 109
           PPH G  H  P  GH   P          GP+  S  G P G  P     G
Sbjct: 81  PPHGGN-HQRPPPGHHHGP------PPSGGPQTSSQPGNPQGPPPQGGPQG 124

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>PKNB_MYCTU (P0A5S4) Probable serine/threonine-protein kinase pknB (EC|
           2.7.11.1)
          Length = 626

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPR--TGHRRSPCLTTRAGACTGP 169
           KNP      AA   A+L   H G P  +P+  T   R+  L++ AG  +GP
Sbjct: 257 KNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 307

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>PKNB_MYCBO (P0A5S5) Probable serine/threonine-protein kinase pknB (EC|
           2.7.11.1)
          Length = 626

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPR--TGHRRSPCLTTRAGACTGP 169
           KNP      AA   A+L   H G P  +P+  T   R+  L++ AG  +GP
Sbjct: 257 KNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 307

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>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
 Frame = -2

Query: 294 TPAAARPANLSPPHAGRPHGSPRTGHRRSP-----CLTTRAG----ACTGPECRSIRGPP 142
           TPAA  P    PP    PH     G R  P       T R G    +   P  R I  PP
Sbjct: 112 TPAAPEPPTAVPPSPQAPHPGMAPGARPGPVPKPGIRTPRVGNNPFSSAQPADRPIPRPP 171

Query: 141 AGQAPDSAESG 109
           A + P +A  G
Sbjct: 172 APR-PGTARPG 181

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>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
 Frame = -2

Query: 294 TPAAARPANLSPPHAGRPHGSPRTGHRRSP-----CLTTRAG----ACTGPECRSIRGPP 142
           TPAA  P    PP    PH     G R  P       T R G    +   P  R I  PP
Sbjct: 112 TPAAPEPPTAVPPSPQAPHPGMAPGARPGPVPKPGIRTPRVGNNPFSSAQPADRPIPRPP 171

Query: 141 AGQAPDSAESG 109
           A + P +A  G
Sbjct: 172 APR-PGTARPG 181

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>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)|
          Length = 705

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
 Frame = -2

Query: 282 ARPANLSP--PHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRG-PPAGQ 133
           +RP    P  P A RP  SP    +  P   TR  + +GP      G PP GQ
Sbjct: 533 SRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQ 585

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>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
 Frame = -2

Query: 318  LKNPAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGP-- 145
            +  PA  R PA           AG        GHR SP      G    P    + GP  
Sbjct: 1040 ITGPAGPRGPAGPHGPPGKDGRAGGHGAIGPVGHRGSP---GHLGPAGPPGSPGLPGPAG 1096

Query: 144  PAGQAPDSAESGGFEAMREADPEF 73
            PAG   D  +SGG++  R   P F
Sbjct: 1097 PAGGGYD--QSGGYDEYRADQPSF 1118

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>SMRD3_MOUSE (Q6P9Z1) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily D member 3 (60 kDa
           BRG-1/Brm-associated factor subunit C) (BRG1-associated
           factor 60C) (mBAF60c)
          Length = 483

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -2

Query: 276 PANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQA 130
           P+    PH G P G P + +  SP +            R    PP GQ+
Sbjct: 31  PSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQS 79

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>CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite repressor)|
          Length = 430

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQ 133
           P A    N+SPPH+  P+    +G        + AG+ +GP+  S+    AGQ
Sbjct: 173 PTAMSSPNVSPPHSYSPYNFAPSGLNPYSHSRSSAGSQSGPDI-SLLARAAGQ 224

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>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = -2

Query: 261 PPHAGRPHGSPRTGHRRSPCLTTRAGACTGP---ECRSIRG--PPAGQAPDSAES 112
           PP  G+P G P  G  +S       G   GP   E  + +G  PPAG  P   ++
Sbjct: 315 PPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 369

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>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein|
           dumpy-15)
          Length = 296

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
 Frame = -2

Query: 309 PAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGP--PAG 136
           P    TP   +P    PP    P G+P  G         R G    P     RGP  PAG
Sbjct: 133 PCEPTTPPPCKPCPQGPPGPPGPPGAP--GDPGEAGTPGRPGTDAAPGSPGPRGPPGPAG 190

Query: 135 Q--APDSAESGGFEAMRE 88
           +  AP  A   G  A+ E
Sbjct: 191 EAGAPGPAGEPGTPAISE 208

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>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)|
            (Obscurin-MLCK) (Obscurin-RhoGEF)
          Length = 7968

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +2

Query: 68   PQNSGSASRIASKPPDSAESGACPAGGPRIDR---HSGPVHAPALVVRHGDLRWPVR 229
            P+ + +     S+PP +  S A PA  PR+ +   H GP   P  + R  +   P+R
Sbjct: 6258 PRGAPALQETGSQPPVTGTSEA-PAVPPRVPQPLLHEGPEQEPEAIARAQEWTVPIR 6313

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>MUTL_RHILO (Q983L2) DNA mismatch repair protein mutL|
          Length = 627

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
 Frame = -2

Query: 294 TPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPD--- 124
           T AA   A   P  A   HG P  GHR        +G+      RS + P   Q  D   
Sbjct: 337 TGAAGMMAAFRPGAASYNHGGPANGHRSYEAAYRASGSAGFDPARSPQRPLDMQFGDFER 396

Query: 123 -SAESGGFEAMREA 85
             A  GGF    +A
Sbjct: 397 AGARHGGFSEPGQA 410

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>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)|
          Length = 704

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = -2

Query: 282 ARPANLSP--PHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAG----QAPDS 121
           +RP    P  P A RP  SP    +  P   TR  + +GP    + G   G    Q P  
Sbjct: 531 SRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQASISGPAPPKVSGASPGGQQRQGPPQ 590

Query: 120 AESGGFEAMREA 85
              G    +R+A
Sbjct: 591 KPPGPAGPIRQA 602

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 17  RAHERGER-SG*KTQTKSPQNSGSASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPA 190
           R   RG+R  G + Q   PQ +   S +A +P   A     P G PR  R   P  APA
Sbjct: 272 RGGYRGDRPQGDRPQGDRPQQTVRYSALAPRPAPGARG---PGGPPRGPRPGVPAAAPA 327

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>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2|
          Length = 959

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPH--GSPRTGH-RRSPCLTTRAGACTGPECRS-IRGPPAGQAPD 124
           P  ARP     P  GRP   G P+ G  R +P +   A     P  +S +R P      D
Sbjct: 244 PYGARPQQAGRPQGGRPQPAGRPQQGSPRPAPIIADAAPIAGKPLPQSQLRKPGQSDDDD 303

Query: 123 SAESGGFEAMREADPE 76
              SG       A PE
Sbjct: 304 DRRSGAARRGVAAKPE 319

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>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2|
          Length = 959

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPH--GSPRTGH-RRSPCLTTRAGACTGPECRS-IRGPPAGQAPD 124
           P  ARP     P  GRP   G P+ G  R +P +   A     P  +S +R P      D
Sbjct: 244 PYGARPQQAGRPQGGRPQPAGRPQQGSPRPAPIIADAAPIAGKPLPQSQLRKPGQSDDDD 303

Query: 123 SAESGGFEAMREADPE 76
              SG       A PE
Sbjct: 304 DRRSGAARRGVAAKPE 319

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>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2|
          Length = 959

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPH--GSPRTGH-RRSPCLTTRAGACTGPECRS-IRGPPAGQAPD 124
           P  ARP     P  GRP   G P+ G  R +P +   A     P  +S +R P      D
Sbjct: 244 PYGARPQQAGRPQGGRPQPAGRPQQGSPRPAPIIADAAPIAGKPLPQSQLRKPGQSDDDD 303

Query: 123 SAESGGFEAMREADPE 76
              SG       A PE
Sbjct: 304 DRRSGAARRGVAAKPE 319

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>IR01_HCMVA (P09710) Hypothetical protein HKLF1 (IRL1) (TRL1)|
          Length = 311

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
 Frame = -2

Query: 309 PAVNRTPAAARPANLSPPHAG------RPHGSPRTGHRRSPCLTTRAGACTGP 169
           P +  TP +  P    PPH         PH SPR+ H   P  +T +     P
Sbjct: 219 PRIRITPISTSPRR-KPPHPATSTASHHPHASPRSDHTLFPVPSTPSATVHNP 270

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>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = -2

Query: 261 PPHAGRPHGSPRTGHRRSPCLTTRAGACTGP---ECRSIRG--PPAGQAPDSAES 112
           PP  G+P G P  G  +S    +  G   GP   E  + +G  PPAG  P   ++
Sbjct: 305 PPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 359

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>FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear factor) (MNF)|
          Length = 617

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/52 (36%), Positives = 20/52 (38%)
 Frame = -2

Query: 288 AAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQ 133
           AAA PA  SPP A  P G P       P      GA     C   R  P G+
Sbjct: 31  AAAFPATTSPPPAQPPPGPPALPAEPGP-----GGALHRRHCHHHRARPGGR 77

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>RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3|
          Length = 179

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +2

Query: 116 SAESGACPAGGPRIDRHSGPVHAPALVVRHGD 211
           SA+ G  P GGP  DR  GP H      R GD
Sbjct: 94  SAKPGGRPFGGPPGDRSRGPRHEGGDRPRFGD 125

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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -2

Query: 291  PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAES 112
            PAA++PA       G+P   P T     P    RA   +  +  + + P  G+AP +  +
Sbjct: 3826 PAASQPA-------GKPQPGPTTAPGPQPAGPPRAEQASSSKPPAAKAPQQGRAPQAQTT 3878

Query: 111  GG 106
             G
Sbjct: 3879 PG 3880

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>SURE1_BURS3 (Q390V3) 5'-nucleotidase surE 1 (EC 3.1.3.5) (Nucleoside|
           5'-monophosphate phosphohydrolase 1)
          Length = 259

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 164 HSGPVHAPALVVRHGDLRWPVRGLP 238
           HS  +H P  V R GD R+ VRG P
Sbjct: 52  HSLSLHEPLRVHRKGDRRFAVRGTP 76

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>VE2_BPV3 (Q8BDD6) Regulatory protein E2|
          Length = 414

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -2

Query: 261 PPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAES 112
           PP   R  G    GH R    + R  A +G + R  RG    ++P S+ S
Sbjct: 204 PPGPNRRRGPQTRGHPRHKSASFRRSASSGSDTRDSRG--RSRSPSSSRS 251

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>HYP1_PISTI (P52748) Hydrophobin-1 precursor|
          Length = 140

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAG-RPHGSPRTGHRRSPCLTTRAGAC-TGP 169
           AV+    A R A   PP A  R HG+P    +RS   +T  G C TGP
Sbjct: 15  AVSAETNAQRMARGLPPKAPIRRHGTPADTEKRSHPSSTGGGQCNTGP 62

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>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 414

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 35  ERSG*KTQTKSPQNSGS-ASRIASKPPDSAESGACP 139
           +R   ++QT+ P  S S  +R  S+PP+S+E+G  P
Sbjct: 288 DRKEDESQTEDPSTSPSPGTRATSQPPNSSEAGRKP 323

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>MSA2_PLAFK (Q03643) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 280

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = -2

Query: 315 KNPAVNRTPAAAR--PANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPP 142
           ++P +  T + +R  P   +  ++  P  +    + RSP +TT       P   +     
Sbjct: 103 RSPPITTTESNSRSPPITTTESNSRSPPITTTESNSRSPPITTTESNSRSPPITTTESSS 162

Query: 141 AGQAPDSAESGGFEAMRE 88
           +G AP+  +  G E+ ++
Sbjct: 163 SGNAPNKTDGKGEESEKQ 180

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>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent|
           helicase brm) (Protein brahma)
          Length = 1638

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRS---PCLTTRAGACTGPECRSIRGPP 142
           P+A  P   S P A  P+G P  G +     P    + G    P+   + GPP
Sbjct: 250 PSAGTPPQCSTPPASNPYGPPVPGQKMQVAPPPPHMQQGQPLPPQPPQVGGPP 302

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>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 23/71 (32%), Positives = 28/71 (39%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAES 112
           PAAA PA   PP A  P G+P     + P L  +  A  G       G   G A     +
Sbjct: 34  PAAAAPA-YHPPAAPTPMGAPMGAPSQGPGLMKQMAATAGGVA---IGSAVGHAVGGMFT 89

Query: 111 GGFEAMREADP 79
           GG  +  E  P
Sbjct: 90  GGGSSHAEQAP 100

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>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1|
          Length = 177

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +2

Query: 116 SAESGACPAGGPRIDRHSGPVHAPALVVRHGDLRWPVRGLPCG 244
           SA+ G  P GGP  DR  GP  +     R GD R   RG P G
Sbjct: 94  SAKPGGRPFGGPPGDRQRGPPRSDGDRPRFGD-RDGYRGGPRG 135

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>GAG_WMSV (P03330) Gag polyprotein [Contains: Core protein p15; Inner coat|
           protein p12; Core shell protein p30; Nucleoprotein p10]
          Length = 511

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
 Frame = -2

Query: 309 PAVNRTPAAARPANLSPPHAGRPHGSPRTG-HRRSPCLTTRA------GACTGPECRSIR 151
           P   +    + P N   P AGRP   PR   +  +  L   +       A   P      
Sbjct: 96  PPSAKIAVVSSPENTQGPSAGRPSAPPRPPIYPATDDLLLLSEPPPYPAALPPPLAPPAV 155

Query: 150 GPPAGQAPDSAESGG 106
           GP  GQAPDS++  G
Sbjct: 156 GPAPGQAPDSSDPEG 170

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>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -2

Query: 249  GRPHGSPRTGHRRSPCLTTRAGACT---GPECRSIRGPPAGQAPD 124
            GRP G  R  HR     T +   C    G EC++  G P+    D
Sbjct: 1937 GRPQGLGRGCHRNCVTTTWKPSCCPGHYGSECQACPGGPSSPCSD 1981

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
 Frame = -2

Query: 291  PAAARPANLSPPHAGRP-----HGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAG--- 136
            P   +  NL PP A  P       +P+    + P +       T P C S   PPAG   
Sbjct: 1005 PGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGT 1064

Query: 135  --QAPDS--AESGG 106
              Q P S  A SGG
Sbjct: 1065 SAQPPCSGAAASGG 1078

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>RB6I2_HUMAN (Q8IUD2) RAB6-interacting protein 2 (ERC protein 1)|
          Length = 1116

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 297 RTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTG 172
           R+     P++ SP  + R   SPR GHRR+      +G+  G
Sbjct: 6   RSVGKVEPSSQSPGRSPRLPRSPRLGHRRTNSTGGSSGSSVG 47

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>RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1692

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSP 205
           A  R PAAAR    SPP + R + + RT   R+P
Sbjct: 409 AGKRAPAAARA---SPPDSPRAYSAERTAETRAP 439

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>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 416

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 14  ARAHERGERSG*KTQTKSPQNSGS-ASRIASKPPDSAESGACP 139
           +++ +  E+   ++Q + P  S S  +R AS+PP+S+E+G  P
Sbjct: 283 SQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKP 325

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>KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C|
          Length = 1100

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
 Frame = -2

Query: 276  PANLSPPHAGRPHGSPRT---GHRRSPCLTTRAGACTGPECRSIR-----GPPAGQAPDS 121
            P N  PP   RPH S R    G  RS     R G  T PE + +R     G P    P  
Sbjct: 1013 PPNRRPPSPRRPHRSRRNSLDGGSRS-----RGGGSTQPEPQHLRPQKHNGYPQQPQPSP 1067

Query: 120  AESGG 106
            A+  G
Sbjct: 1068 AQRPG 1072

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>ZEP2_RAT (Q00900) Human immunodeficiency virus type I enhancer-binding protein|
            2 homolog (DNA-binding protein AGIE-BP1) (Angiotensinogen
            gene-inducible enhancer-binding protein 1) (Myc
            intron-binding protein 1)
          Length = 2437

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
 Frame = +2

Query: 53   TQTKSPQNS---------GSASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPALVVRH 205
            TQ K+P  S         G  S   + P D AESG+ P    ++ +HS   H    +VR 
Sbjct: 823  TQDKTPSPSEMGDSEVLEGPVSPEWAPPGDGAESGSRPTPSQQVPQHS--YHGQPRLVRQ 880

Query: 206  GDLRWP 223
             +++ P
Sbjct: 881  HNIQVP 886

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>SPT6H_DROME (Q9W420) Transcription elongation factor SPT6|
          Length = 1831

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -2

Query: 294  TPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPEC-RSIRGPPAGQAPDSA 118
            TPA+A  +NL+P H  RP           P +++ +    GP+   S+ G   G  P S 
Sbjct: 1530 TPASASASNLTPLHLMRP----------PPTISSSSQTSLGPQAPYSVTGSVTGGTPRSG 1579

Query: 117  ES 112
             S
Sbjct: 1580 IS 1581

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>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = -2

Query: 318 LKNPAVNRTPAAARPANLSPPHAGRPHG-SPRTGHRRSPCLTTRAGACTGPECRSIRGPP 142
           ++N ++NR P     +   PP    P G SP+   ++SP   +      GP   S  GPP
Sbjct: 38  MQNLSLNRPPPMMPGSGPRPPP---PFGQSPQPFPQQSP---SYGAPQRGPSPMSRPGPP 91

Query: 141 AGQA-----PDSAESGGFEA 97
           AG A     P  ++  GF++
Sbjct: 92  AGMARPGGPPPVSQPAGFQS 111

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>VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein]
          Length = 621

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 11/66 (16%)
 Frame = -2

Query: 291 PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTT-----------RAGACTGPECRSIRGP 145
           P    PA L P H   P   P   H  S   +            RAG   GP   + + P
Sbjct: 463 PGEGAPAELPPHHHSPPPPHPPPSHALSKLASAVSSLQQEVSQLRAGYPYGPAFAAAQHP 522

Query: 144 PAGQAP 127
           PA   P
Sbjct: 523 PAAHLP 528

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>SOS1_HUMAN (Q07889) Son of sevenless homolog 1 (SOS-1)|
          Length = 1333

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = -2

Query: 291  PAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPP 142
            P +  P    PP    PHG+ R  H  SP LT         +  SI GPP
Sbjct: 1250 PNSPSPFTPPPPQTPSPHGTRR--HLPSPPLTQEV------DLHSIAGPP 1291

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>CT055_HUMAN (Q9BQ89) Protein C20orf55|
          Length = 295

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +2

Query: 11  PARAHERGERSG*KTQTKSPQNSGSASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPA 190
           P RA   G R    T  + P ++ +  R+  +P  ++ +  CP+ GP     S P   P 
Sbjct: 127 PGRAEGAG-RPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPA--AASSPARPPG 183

Query: 191 LVVRHGDL 214
           L     DL
Sbjct: 184 LQRSKSDL 191

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>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)|
          Length = 401

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 83  SASRIASKPPDSAESGACPAGGPRIDRHSGPVHAPALVV 199
           +A+  ASKP DS       AG P       P H PA+++
Sbjct: 223 AAAAAASKPSDSGGGSGGNAGSPGAQGAKFPEHNPAILL 261

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>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 20/66 (30%), Positives = 23/66 (34%)
 Frame = -2

Query: 306 AVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAP 127
           A   TP        S P AG P   P      SP    +AGA       SI GP   +A 
Sbjct: 519 ASQATPVTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGAPQATRQASISGPAPTKAS 578

Query: 126 DSAESG 109
            +   G
Sbjct: 579 GAPPGG 584

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>PRDM6_HUMAN (Q9NQX0) PR domain zinc finger protein 6 (PR domain-containing|
           protein 6) (Fragment)
          Length = 608

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 258 PHAGRPHGSPRTGHRRSPCLTTRAGACTGPECRSIRGPPAGQAPDSAESGGFEA 97
           P  G       +G  + P     +GA   P  R++RGPP   A     SGGF A
Sbjct: 35  PERGTKEPGRGSGQAQQPT-AVESGAQVRPHSRALRGPPNFLA---CRSGGFRA 84

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>V_SENDA (Q9DUE1) Protein V|
          Length = 369

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
 Frame = -2

Query: 315 KNPAVNRTPAAARPANLSPPHAGRPHGSPRTGHRRSPCLTTRAG-----ACTGPECRSIR 151
           + P      A  RP +  P H G    + + GHRR   +  R G     +   P C  IR
Sbjct: 286 RRPPTGTRSAPDRPTDGYPTHPGPETDATKKGHRREHIIYERDGYIVNESWCNPVCSRIR 345


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,174,685
Number of Sequences: 219361
Number of extensions: 880059
Number of successful extensions: 4705
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 4227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4670
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result