ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481458.1| Oryza sativa (japonica cultivar-group), mRNA 147 3e-32
2gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 147 3e-32
3gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 147 3e-32
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 3e-32
5dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 147 3e-32
6dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 147 3e-32
7dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 3e-32
8emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in... 44 0.37
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
10dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
11dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
12dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
13dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
14dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
15dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
16emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in... 44 0.37
17emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2... 42 1.5
18emb|AJ250842.1|DBI250842 Dunaliella bioculata mRNA for plastidic... 42 1.5
19gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 42 1.5
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
23emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chr... 42 1.5
24ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1),... 40 5.8
25gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.8
26gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (... 40 5.8
27gb|BC026108.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 5.8
28gb|AC131105.4| Mus musculus BAC clone RP23-280N9 from chromosome... 40 5.8
29gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, comp... 40 5.8
30gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome... 40 5.8
31ref|XM_446803.1| Candida glabrata CBS138, CAGL0G10175g partial mRNA 40 5.8
32gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosom... 40 5.8
33ref|XM_762080.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 5.8
34ref|XM_661262.1| Cryptosporidium hominis TU502 CG13900 gene prod... 40 5.8
35emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 o... 40 5.8
36gb|BC066968.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 5.8
37emb|AL591662.6| Human DNA sequence from clone RP11-28P17 on chro... 40 5.8
38gb|AC098652.2| Homo sapiens chromosome 1 clone RP11-24D16, compl... 40 5.8
39emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase... 40 5.8
40emb|X13520.1|RCHUPLS Rhodobacter capsulatus ORFX and hupL and hu... 40 5.8
41emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 5.8
42gb|BC045713.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 5.8
43ref|XM_687218.1| PREDICTED: Danio rerio similar to LOC553425 pro... 40 5.8
44gb|AC092813.2| Homo sapiens chromosome 1 clone RP11-550H2, compl... 40 5.8
45ref|XM_627314.1| Cryptosporidium parvum Iowa II possible spliceo... 40 5.8
46gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, compl... 40 5.8
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48gb|AF253978.1|AF253978 Homo sapiens BAT2-iso mRNA, partial cds 40 5.8
49gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, com... 40 5.8
50gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2... 40 5.8
51dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
52dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Can... 40 5.8
54dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
55emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, whi... 40 5.8
56emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on ch... 40 5.8
57gb|BC058930.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 5.8
58gb|BC001260.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 5.8
59emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chr... 40 5.8
60gb|M37261.1|RCAHUPGA R.capsulatus hydrogenase gene, complete cds 40 5.8 
>ref|XM_481458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3030

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 221 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 90  gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 149

                                                                       
Query: 281 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 150 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 209

                                         
Query: 341 gtggcagttgcactacaaaagaatcgagga 370
           |||||||||||||||||||||||| |||||
Sbjct: 210 gtggcagttgcactacaaaagaattgagga 239
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                         
Query: 221   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 16775 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 16834

                                                                         
Query: 281   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 16835 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 16894

                                           
Query: 341   gtggcagttgcactacaaaagaatcgagga 370
             |||||||||||||||||||||||| |||||
Sbjct: 16895 gtggcagttgcactacaaaagaattgagga 16924
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 221   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 60160 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 60101

                                                                         
Query: 281   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 60100 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 60041

                                           
Query: 341   gtggcagttgcactacaaaagaatcgagga 370
             |||||||||||||||||||||||| |||||
Sbjct: 60040 gtggcagttgcactacaaaagaattgagga 60011
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                            
Query: 221      gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
                |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 12722981 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 12722922

                                                                            
Query: 281      tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
                ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 12722921 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 12722862

                                              
Query: 341      gtggcagttgcactacaaaagaatcgagga 370
                |||||||||||||||||||||||| |||||
Sbjct: 12722861 gtggcagttgcactacaaaagaattgagga 12722832



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 21       ttcccctctccttctctcgctc 42
                ||||||||||||||||||||||
Sbjct: 26425795 ttcccctctccttctctcgctc 26425774



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 12       tccccaaaattcccctctccttctct 37
                ||||||||||||| ||||||||||||
Sbjct: 22749105 tccccaaaattcctctctccttctct 22749130



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     tgcatctcagaatggtaaga 423
               ||||||||||||||||||||
Sbjct: 1665673 tgcatctcagaatggtaaga 1665654
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>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 221   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 66976 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 66917

                                                                         
Query: 281   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 66916 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 66857

                                           
Query: 341   gtggcagttgcactacaaaagaatcgagga 370
             |||||||||||||||||||||||| |||||
Sbjct: 66856 gtggcagttgcactacaaaagaattgagga 66827
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>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                          
Query: 221    gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
              |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 108950 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 108891

                                                                          
Query: 281    tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
              ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 108890 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 108831

                                            
Query: 341    gtggcagttgcactacaaaagaatcgagga 370
              |||||||||||||||||||||||| |||||
Sbjct: 108830 gtggcagttgcactacaaaagaattgagga 108801
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>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
           insert sequence
          Length = 4003

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 221 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 280
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 426 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 485

                                                                       
Query: 281 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 340
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 486 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 545

                                         
Query: 341 gtggcagttgcactacaaaagaatcgagga 370
           |||||||||||||||||||||||| |||||
Sbjct: 546 gtggcagttgcactacaaaagaattgagga 575
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>emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in linkage group 18,
             complete sequence
          Length = 27796

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 239   cccatcagatcccaacatatgg 260
             ||||||||||||||||||||||
Sbjct: 10249 cccatcagatcccaacatatgg 10228
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 21       ttcccctctccttctctcgctc 42
                ||||||||||||||||||||||
Sbjct: 30397006 ttcccctctccttctctcgctc 30396985
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>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435H01
          Length = 160141

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ttcccctctccttctctcgctc 42
             ||||||||||||||||||||||
Sbjct: 25269 ttcccctctccttctctcgctc 25248
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>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456A01
          Length = 143710

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ttcccctctccttctctcgctc 42
             ||||||||||||||||||||||
Sbjct: 82733 ttcccctctccttctctcgctc 82712
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ttcccctctccttctctcgctc 42
             ||||||||||||||||||||||
Sbjct: 75347 ttcccctctccttctctcgctc 75326
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     ttcccctctccttctctcgctc 42
              ||||||||||||||||||||||
Sbjct: 155376 ttcccctctccttctctcgctc 155355
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>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1116H04
          Length = 140142

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 12    tccccaaaattcccctctccttctct 37
             ||||||||||||| ||||||||||||
Sbjct: 75747 tccccaaaattcctctctccttctct 75772
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>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1111C03
          Length = 144879

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 12     tccccaaaattcccctctccttctct 37
              ||||||||||||| ||||||||||||
Sbjct: 117899 tccccaaaattcctctctccttctct 117924
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>emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in linkage group 18,
             complete sequence
          Length = 197774

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 239   cccatcagatcccaacatatgg 260
             ||||||||||||||||||||||
Sbjct: 19672 cccatcagatcccaacatatgg 19693
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>emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2 on chromosome 22 Contains
            an STSs and GSSs, complete sequence
          Length = 39004

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 406  catctcagaatggtaagaacaatgc 430
            ||||||||||||| |||||||||||
Sbjct: 3594 catctcagaatgggaagaacaatgc 3570
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>emb|AJ250842.1|DBI250842 Dunaliella bioculata mRNA for plastidic NADP-dependent malate
           dehydrogenase (nadp-MDH gene)
          Length = 1619

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 389 ttctgcaggttcagctgcatc 409
           |||||||||||||||||||||
Sbjct: 42  ttctgcaggttcagctgcatc 22
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>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 406  catctcagaatggtaagaacaatgc 430
            ||||||||||||| |||||||||||
Sbjct: 6877 catctcagaatgggaagaacaatgc 6853
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 162      cgggacctcgtgcagcgcctc 182
                |||||||||||||||||||||
Sbjct: 24460746 cgggacctcgtgcagcgcctc 24460726
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0012B02
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   cgggacctcgtgcagcgcctc 182
             |||||||||||||||||||||
Sbjct: 72219 cgggacctcgtgcagcgcctc 72199
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>dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F03, full
           insert sequence
          Length = 915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 cgggacctcgtgcagcgcctc 182
           |||||||||||||||||||||
Sbjct: 346 cgggacctcgtgcagcgcctc 366
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>emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chromosome 2, complete
             sequence
          Length = 150222

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     cttcccctccccaaaattccc 25
             |||||||||||||||||||||
Sbjct: 49345 cttcccctccccaaaattccc 49365
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>ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1), mRNA
          Length = 10383

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1860 ccctctccttctctcgctcc 1841
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     tctgcaggttcagctgcatc 409
               ||||||||||||||||||||
Sbjct: 2233033 tctgcaggttcagctgcatc 2233014
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>gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone
           MGC:77239 IMAGE:6963267), complete cds
          Length = 2782

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  ccctctccttctctcgctcc 43
           ||||||||||||||||||||
Sbjct: 831 ccctctccttctctcgctcc 812
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>gb|BC026108.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4794617)
          Length = 1941

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1837 ccctctccttctctcgctcc 1818
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>gb|AC131105.4| Mus musculus BAC clone RP23-280N9 from chromosome 19, complete sequence
          Length = 225527

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ctctcttcccctccccaaaa 20
              ||||||||||||||||||||
Sbjct: 169743 ctctcttcccctccccaaaa 169762
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>gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, complete sequence
          Length = 134922

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    tgcaggtgatggtactgatgttca 111
             ||||||||| ||||||||||||||
Sbjct: 20687 tgcaggtgaaggtactgatgttca 20664
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>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete
            sequence
          Length = 237854

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ctctcttcccctccccaaaa 20
            ||||||||||||||||||||
Sbjct: 2895 ctctcttcccctccccaaaa 2914
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>ref|XM_446803.1| Candida glabrata CBS138, CAGL0G10175g partial mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 392  tgcaggttcagctgcatctcagaatggt 419
            |||||||||||||||||||  |||||||
Sbjct: 1653 tgcaggttcagctgcatctttgaatggt 1680
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>gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosome 19, complete
             sequence
          Length = 187534

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gtgagaactttgagaaaatg 290
             ||||||||||||||||||||
Sbjct: 44175 gtgagaactttgagaaaatg 44194
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>ref|XM_762080.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_17_617_10144)
            partial mRNA
          Length = 9528

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  gagaagtcagcacagtccaa 235
            ||||||||||||||||||||
Sbjct: 9161 gagaagtcagcacagtccaa 9180
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>ref|XM_661262.1| Cryptosporidium hominis TU502 CG13900 gene product (Chro.80487)
            partial mRNA
          Length = 3957

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  gaactttgagaaaatgattc 294
            ||||||||||||||||||||
Sbjct: 2378 gaactttgagaaaatgattc 2359
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>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3
             Contains part of the gene for HBxAg transactivated protein
             2 (XTP2), complete sequence
          Length = 99886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ccctctccttctctcgctcc 43
             ||||||||||||||||||||
Sbjct: 42935 ccctctccttctctcgctcc 42916
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>gb|BC066968.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:5260574)
          Length = 1987

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1881 ccctctccttctctcgctcc 1862
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>emb|AL591662.6| Human DNA sequence from clone RP11-28P17 on chromosome 9 Contains part
             of the TMC1 gene for transmembrane cochlear-expressed 1, a
             ribosomal protein S20 (RPS20) pseudogene and a ribosomal
             protein S27a (RPS27A) pseudogene, complete sequence
          Length = 170815

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tgagaactttgagaaaatga 291
             ||||||||||||||||||||
Sbjct: 37345 tgagaactttgagaaaatga 37326
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>gb|AC098652.2| Homo sapiens chromosome 1 clone RP11-24D16, complete sequence
          Length = 156393

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 410  tcagaatggtaagaacaatg 429
            ||||||||||||||||||||
Sbjct: 9073 tcagaatggtaagaacaatg 9092
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>emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase operon
          Length = 11280

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tctgcaggttcagctgcatc 409
            ||||||||||||||||||||
Sbjct: 8421 tctgcaggttcagctgcatc 8402
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>emb|X13520.1|RCHUPLS Rhodobacter capsulatus ORFX and hupL and hupS genes for hydrogenase
            large and small subunits
          Length = 4175

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tctgcaggttcagctgcatc 409
            ||||||||||||||||||||
Sbjct: 1912 tctgcaggttcagctgcatc 1893
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 392    tgcaggttcagctgcatctcagaatggt 419
              |||||||||||||||||||  |||||||
Sbjct: 979135 tgcaggttcagctgcatctttgaatggt 979162
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>gb|BC045713.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4794601), complete cds
          Length = 1936

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1832 ccctctccttctctcgctcc 1813
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>ref|XM_687218.1| PREDICTED: Danio rerio similar to LOC553425 protein (LOC563852),
           partial mRNA
          Length = 1435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  ccctctccttctctcgctcc 43
           ||||||||||||||||||||
Sbjct: 571 ccctctccttctctcgctcc 552
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>gb|AC092813.2| Homo sapiens chromosome 1 clone RP11-550H2, complete sequence
          Length = 182529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ccaacatatggcttcagatg 269
             ||||||||||||||||||||
Sbjct: 88599 ccaacatatggcttcagatg 88580
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>ref|XM_627314.1| Cryptosporidium parvum Iowa II possible spliceosome factor
            (cgd8_4240), partial mRNA
          Length = 3954

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  gaactttgagaaaatgattc 294
            ||||||||||||||||||||
Sbjct: 2378 gaactttgagaaaatgattc 2359
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>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence
          Length = 198279

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   tcagaatggtaagaacaatg 429
             ||||||||||||||||||||
Sbjct: 22142 tcagaatggtaagaacaatg 22123
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 22       tcccctctccttctctcgctccag 45
                ||||||||||||||||| ||||||
Sbjct: 18567371 tcccctctccttctctctctccag 18567348
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>gb|AF253978.1|AF253978 Homo sapiens BAT2-iso mRNA, partial cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1665 ccctctccttctctcgctcc 1646
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>gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, complete sequence
          Length = 207345

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    tgcaggtgatggtactgatgttca 111
             ||||||||| ||||||||||||||
Sbjct: 94006 tgcaggtgaaggtactgatgttca 94029
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>gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2) mRNA, complete cds
          Length = 8106

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1594 ccctctccttctctcgctcc 1575
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tcccctctccttctctcgctccag 45
             ||||||||||||||||| ||||||
Sbjct: 19913 tcccctctccttctctctctccag 19890
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tcccctctccttctctcgctccag 45
             ||||||||||||||||| ||||||
Sbjct: 96127 tcccctctccttctctctctccag 96104
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>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174195

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   atctcagaatggtaagaacaatgc 430
             ||||||||||||||||||| ||||
Sbjct: 10178 atctcagaatggtaagaacgatgc 10201
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>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0582D05
          Length = 150483

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tgcatctcagaatggtaaga 423
             ||||||||||||||||||||
Sbjct: 65173 tgcatctcagaatggtaaga 65154
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>emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, which has similarities to BAT2
            genes
          Length = 10174

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1651 ccctctccttctctcgctcc 1632
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>emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on chromosome 16, complete
             sequence
          Length = 136128

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   gtgagaactttgagaaaatg 290
             ||||||||||||||||||||
Sbjct: 99195 gtgagaactttgagaaaatg 99214
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>gb|BC058930.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4998749), partial cds
          Length = 1974

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1843 ccctctccttctctcgctcc 1824
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>gb|BC001260.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:3460804)
          Length = 1962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ccctctccttctctcgctcc 43
            ||||||||||||||||||||
Sbjct: 1831 ccctctccttctctcgctcc 1812
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>emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chromosome 2, complete
              sequence
          Length = 215139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 5      cttcccctccccaaaattcccctctccttctc 36
              ||||||||||||||| | | ||||||||||||
Sbjct: 109955 cttcccctccccaaagtccacctctccttctc 109986
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>gb|M37261.1|RCAHUPGA R.capsulatus hydrogenase gene, complete cds
          Length = 3018

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tctgcaggttcagctgcatc 409
            ||||||||||||||||||||
Sbjct: 1423 tctgcaggttcagctgcatc 1404


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,864,624
Number of Sequences: 3902068
Number of extensions: 3864624
Number of successful extensions: 83655
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83374
Number of HSP's gapped (non-prelim): 281
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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