ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08h03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 268 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 327 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 107293 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 107352 Query: 328 ctcccgtggg 337 |||||||||| Sbjct: 107353 ctcccgtggg 107362
>ref|XM_475224.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2529 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 268 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 327 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 64 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 123 Query: 328 ctcccgtggg 337 |||||||||| Sbjct: 124 ctcccgtggg 133
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 268 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 327 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 31843 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 31902 Query: 328 ctcccgtggg 337 |||||||||| Sbjct: 31903 ctcccgtggg 31912
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 268 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 327 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 19779219 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 19779278 Query: 328 ctcccgtggg 337 |||||||||| Sbjct: 19779279 ctcccgtggg 19779288 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 22128231 ccccgcctccgccgcagcca 22128250
>dbj|AK100057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158B16, full insert sequence Length = 2917 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 268 cccgtctgggactgggacaacctcctcgacttcgccatcccggatgacgattccctgctc 327 |||||||||||||||| |||||||||||||||||| ||| || ||||| || ||| || Sbjct: 299 cccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtc 358 Query: 328 ctcccgtggg 337 |||||||||| Sbjct: 359 ctcccgtggg 368
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 ccaaagcctttccttcctcctccc 25 |||||||||||||||||||||||| Sbjct: 60468 ccaaagcctttccttcctcctccc 60491
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 ccaaagcctttccttcctcctccc 25 |||||||||||||||||||||||| Sbjct: 85035 ccaaagcctttccttcctcctccc 85012
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 225 ctccgactccggcgggggcggcg 247 ||||||||||||||||||||||| Sbjct: 1950208 ctccgactccggcgggggcggcg 1950186
>gb|BC072023.1| Homo sapiens transcription factor 7 (T-cell specific, HMG-box), transcript variant 1, mRNA (cDNA clone MGC:88737 IMAGE:6292932), complete cds Length = 2974 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 gactccggcgggggcggcgcgg 250 |||||||||||||||||||||| Sbjct: 144 gactccggcgggggcggcgcgg 165
>ref|NM_003202.2| Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 1, mRNA Length = 3283 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 gactccggcgggggcggcgcgg 250 |||||||||||||||||||||| Sbjct: 209 gactccggcgggggcggcgcgg 230
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence Length = 160672 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 gactccggcgggggcggcgcgg 250 |||||||||||||||||||||| Sbjct: 142801 gactccggcgggggcggcgcgg 142822
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccg 256 |||||||||||||||||||||| Sbjct: 38938019 ggcgggggcggcgcggcggccg 38937998 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 tccggcgggggcggcgcggcggccg 256 ||||||||||||||||| ||||||| Sbjct: 4825809 tccggcgggggcggcgccgcggccg 4825785 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 40605674 ccggcgggagcggcgcggcggccg 40605697 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 32214764 ccccgcctccgccgcagcca 32214745
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 gcctttccttcctcctcccgcg 28 |||||||||||||||||||||| Sbjct: 162449 gcctttccttcctcctcccgcg 162470
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccg 256 |||||||||||||||||||||| Sbjct: 11652 ggcgggggcggcgcggcggccg 11631
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccg 256 |||||||||||||||||||||| Sbjct: 102805 ggcgggggcggcgcggcggccg 102784
>gb|BC048769.1| Homo sapiens transcription factor 7 (T-cell specific, HMG-box), transcript variant 1, mRNA (cDNA clone MGC:47735 IMAGE:6063270), complete cds Length = 3047 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 gactccggcgggggcggcgcgg 250 |||||||||||||||||||||| Sbjct: 209 gactccggcgggggcggcgcgg 230
>gb|AF163776.1|AF163776 Homo sapiens TCF1 gene, partial cds Length = 1362 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 gactccggcgggggcggcgcgg 250 |||||||||||||||||||||| Sbjct: 1170 gactccggcgggggcggcgcgg 1191
>ref|NM_189657.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 tccggcgggggcggcgcggcggccg 256 ||||||||||||||||| ||||||| Sbjct: 107 tccggcgggggcggcgccgcggccg 83
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 gacaacctcctcgacttcgccatcc 307 |||||||||||| |||||||||||| Sbjct: 562613 gacaacctcctctacttcgccatcc 562589
>ref|XM_479306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccgatg 259 ||||| ||||||||||||||||||| Sbjct: 240 ggcggcggcggcgcggcggccgatg 216
>ref|XM_472172.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1461 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 cggcgggggcggcgcggcggccgatgcgg 262 ||||||||| |||| |||||||||||||| Sbjct: 178 cggcgggggaggcggggcggccgatgcgg 150
>ref|XM_954181.1| Neurospora crassa OR74A hypothetical protein (NCU06927.1) partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgccttctcccccctccccacca 91 |||||||||||| |||||||||||| Sbjct: 682 gccgccttctcctccctccccacca 706
>ref|XM_957630.1| Neurospora crassa OR74A hypothetical protein (NCU07874.1) partial mRNA Length = 1473 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgggggcggcgcggcggccga 257 ||||||||||||||||||||| Sbjct: 259 cgggggcggcgcggcggccga 239
>ref|XM_327212.1| Neurospora crassa OR74A hypothetical protein (NCU06927.1) partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgccttctcccccctccccacca 91 |||||||||||| |||||||||||| Sbjct: 682 gccgccttctcctccctccccacca 706
>ref|XM_328579.1| Neurospora crassa OR74A hypothetical protein (NCU07874.1) partial mRNA Length = 1473 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgggggcggcgcggcggccga 257 ||||||||||||||||||||| Sbjct: 259 cgggggcggcgcggcggccga 239
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 78653 cggcgggggcggcgcggcggc 78673
>ref|XM_845484.1| PREDICTED: Canis familiaris similar to Parvalbumin alpha, transcript variant 4 (LOC481278), mRNA Length = 940 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ccggcgggggcggcgcggcgg 253 ||||||||||||||||||||| Sbjct: 212 ccggcgggggcggcgcggcgg 232
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 cgcgtcgccggccgccttctcccccctcc 85 ||||||||||||| ||| ||||||||||| Sbjct: 178986 cgcgtcgccggcctcctcctcccccctcc 179014
>ref|NM_010026.2| Mus musculus development and differentiation enhancing (Ddef1), mRNA Length = 4612 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 cgcgtcgccggccgccttctcccccctcc 85 ||||||||||||| ||| ||||||||||| Sbjct: 68 cgcgtcgccggcctcctcctcccccctcc 96
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 ggagccggcgcctgcgccacc 434 ||||||||||||||||||||| Sbjct: 3786524 ggagccggcgcctgcgccacc 3786504
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggccgatgcgg 262 ||||||||| |||| |||||||||||||| Sbjct: 18186889 cggcgggggaggcggggcggccgatgcgg 18186917 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 actccggcgggggcggcgcggcgg 253 ||||||||| |||||||||||||| Sbjct: 29836863 actccggcgcgggcggcgcggcgg 29836886
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 16438054 cggcgggggcggcgcggcggc 16438074
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 cctcgacttcgccatcccgga 311 ||||||||||||||||||||| Sbjct: 4433174 cctcgacttcgccatcccgga 4433154
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccgatg 259 ||||| ||||||||||||||||||| Sbjct: 26681318 ggcggcggcggcgcggcggccgatg 26681294 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccctgccccgcctccgccgc 406 |||||||||||||||||||| Sbjct: 23566203 ccctgccccgcctccgccgc 23566222 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 ||||||| |||||||||||||||| Sbjct: 689450 ccggcggcggcggcgcggcggccg 689427
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 26870092 cggcgggggcggcgcggcggc 26870112
>gb|BC094581.1| Mus musculus development and differentiation enhancing, mRNA (cDNA clone MGC:106491 IMAGE:30549241), complete cds Length = 4612 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 cgcgtcgccggccgccttctcccccctcc 85 ||||||||||||| ||| ||||||||||| Sbjct: 68 cgcgtcgccggcctcctcctcccccctcc 96
>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence Length = 229269 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctcccc 87 |||||| |||||||||||||||||| Sbjct: 165757 gccggctgccttctcccccctcccc 165781
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 cgcggcggccgatgcggggga 266 ||||||||||||||||||||| Sbjct: 8232514 cgcggcggccgatgcggggga 8232534 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgggggcggcgcggcggc 254 |||||||||||||||||||| Sbjct: 2533599 ggcgggggcggcgcggcggc 2533618
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 tccggcgggggcggcgcggcggccg 256 ||||||||||||||||| ||||||| Sbjct: 70458 tccggcgggggcggcgccgcggccg 70434
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ggcgcggcggccgatgcgggg 264 ||||||||||||||||||||| Sbjct: 8169440 ggcgcggcggccgatgcgggg 8169420
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 124718 cggcgggggcggcgcggcggc 124738
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccgatg 259 ||||| ||||||||||||||||||| Sbjct: 28175 ggcggcggcggcgcggcggccgatg 28151
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 cctcgacttcgccatcccgga 311 ||||||||||||||||||||| Sbjct: 5662 cctcgacttcgccatcccgga 5642
>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full insert sequence Length = 1834 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 tccggcgggggcggcgcggcggccg 256 ||||||||||||||||| ||||||| Sbjct: 220 tccggcgggggcggcgccgcggccg 196
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggccgatg 259 ||||| ||||||||||||||||||| Sbjct: 98922 ggcggcggcggcgcggcggccgatg 98898
>dbj|AK101615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052F07, full insert sequence Length = 1900 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 234 cggcgggggcggcgcggcggccgatgcgg 262 ||||||||| |||| |||||||||||||| Sbjct: 261 cggcgggggaggcggggcggccgatgcgg 233
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 16529058 cggcgggggcggcgcggcggc 16529078
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggccgatgcgg 262 ||||||||| |||| |||||||||||||| Sbjct: 22563 cggcgggggaggcggggcggccgatgcgg 22591
>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940126D9, complete sequence Length = 125236 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggc 254 ||||||||||||||||||||| Sbjct: 73719 cggcgggggcggcgcggcggc 73739
>gb|AY741093.1| Integration vector pJK202, complete sequence Length = 53204 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 46121 gcccgccctcttcgcgtcgccggc 46098
>ref|XM_475356.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 249 ccccgcctccgccgcagcca 230
>ref|NM_191366.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1845 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 36 ccccgcctccgccgcagcca 17
>ref|XM_463680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 64 ccggcgggagcggcgcggcggccg 41
>ref|NM_005380.3| Homo sapiens neuroblastoma, suppression of tumorigenicity 1 (NBL1), transcript variant 2, mRNA Length = 2056 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 1535 gccggccgccttctcccctctccc 1558
>ref|NM_182744.1| Homo sapiens neuroblastoma, suppression of tumorigenicity 1 (NBL1), transcript variant 1, mRNA Length = 2096 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 1575 gccggccgccttctcccctctccc 1598
>ref|XM_478901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccctgccccgcctccgccgc 406 |||||||||||||||||||| Sbjct: 95 ccctgccccgcctccgccgc 114
>ref|NM_194111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccggcgggggcggcgcggcggccg 256 ||||||| |||||||||||||||| Sbjct: 250 ccggcggcggcggcgcggcggccg 273
>ref|XM_473719.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 actccggcgggggcggcgcggcgg 253 ||||||||| |||||||||||||| Sbjct: 413 actccggcgcgggcggcgcggcgg 436
>gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome 1, complete sequence Length = 196764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tctcccccctccccaccacg 93 |||||||||||||||||||| Sbjct: 106234 tctcccccctccccaccacg 106253
>gb|AC119947.14| Mus musculus chromosome 19, clone RP24-446G1, complete sequence Length = 142066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggc 254 |||||||||||||||||||| Sbjct: 28693 ggcgggggcggcgcggcggc 28674
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggcgctgctccctgccccgc 397 |||||||||||||||||||| Sbjct: 259155 ggcgctgctccctgccccgc 259136
>gb|AC008317.7| Drosophila melanogaster clone BACR08N17, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 15051 cctgccccgcctccgccgctgcca 15028
>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence Length = 162593 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 87076 cctgccccgcctccgccgctgcca 87053
>gb|BC012037.1| Homo sapiens neuroblastoma, suppression of tumorigenicity 1, transcript variant 2, mRNA (cDNA clone MGC:8972 IMAGE:3874204), complete cds Length = 2003 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 1482 gccggccgccttctcccctctccc 1505
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 82212 ccccgcctccgccgcagcca 82231
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cagtggagccggcgcctgcgccac 433 |||||||||| ||||||||||||| Sbjct: 168626 cagtggagccagcgcctgcgccac 168603
>gb|DQ091279.1| Cloning vector pBTL-6, complete sequence Length = 4677 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 1678 gcccgccctcttcgcgtcgccggc 1701
>gb|DQ091278.1| Cloning vector pBMTL-6, complete sequence Length = 5922 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 2923 gcccgccctcttcgcgtcgccggc 2946
>gb|DQ091277.1| Cloning vector pBTB-6, complete sequence Length = 5799 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 1678 gcccgccctcttcgcgtcgccggc 1701
>gb|DQ091276.1| Cloning vector pBMTB-6, complete sequence Length = 7044 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 2923 gcccgccctcttcgcgtcgccggc 2946
>gb|DQ091275.1| Cloning vector pBT-6, complete sequence Length = 4617 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 1678 gcccgccctcttcgcgtcgccggc 1701
>gb|DQ091274.1| Cloning vector pBMT-6, complete sequence Length = 5862 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 2923 gcccgccctcttcgcgtcgccggc 2946
>ref|XM_855759.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-1, transcript variant 5 (LOC607766), mRNA Length = 1348 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggccga 257 |||||| ||||||||||||||||| Sbjct: 110 cggcggcggcggcgcggcggccga 133
>ref|XM_855727.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-1, transcript variant 4 (LOC607766), mRNA Length = 961 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 cggcgggggcggcgcggcggccga 257 |||||| ||||||||||||||||| Sbjct: 101 cggcggcggcggcgcggcggccga 124
>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome Length = 68869 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 66600 gcccgccctcttcgcgtcgccggc 66577
>gb|AC124345.4| Mus musculus BAC clone RP24-459N19 from chromosome 15, complete sequence Length = 184532 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 16088 ccttctcccccctccccacc 16069
>emb|X65165.1|VCISGMR V.carteri ISG mRNA for extensin Length = 1395 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ccgcctccgccgcagccagt 413 |||||||||||||||||||| Sbjct: 901 ccgcctccgccgcagccagt 920
>ref|XM_536720.2| PREDICTED: Canis familiaris similar to PR domain containing 16 isoform 2 (LOC479582), mRNA Length = 3993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gcgggggcggcgcggcggcc 255 |||||||||||||||||||| Sbjct: 2171 gcgggggcggcgcggcggcc 2190
>gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's Hospital Oakland Research Institute) complete sequence Length = 186074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tgggactgggacaacctcct 293 |||||||||||||||||||| Sbjct: 173747 tgggactgggacaacctcct 173728
>emb|AL445931.29| Human DNA sequence from clone RP11-374P20 on chromosome 9 Contains the 5' end of the VAV2 gene for vav 2 oncogene, a novel gene (FLJ35348), the 3' end of the BRD3 gene for bromodomain containing 3, a novel gene and five CpG islands, complete sequence Length = 175033 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctcccccctccccaccacgc 94 |||||||||||||||||||| Sbjct: 68821 ctcccccctccccaccacgc 68840
>gb|BT009970.1| Drosophila melanogaster RE63138 full insert cDNA Length = 5869 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2664 cctgccccgcctccgccgctgcca 2641
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 86376 gccggccgccttctcccctctccc 86399
>emb|CR855378.6| Zebrafish DNA sequence from clone CH211-284K16 in linkage group 14, complete sequence Length = 151573 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 128705 ccttctcccccctccccacc 128724
>gb|AC145208.1| Homo sapiens chromosome 17, clone XXfos-85405H6, complete sequence Length = 37556 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gacgattccctgctcctccc 332 |||||||||||||||||||| Sbjct: 32966 gacgattccctgctcctccc 32947
>emb|X62589.1|DMPUMI D.melanogaster mRNA for pumilio protein Length = 6120 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2117 cctgccccgcctccgccgctgcca 2094
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 atggacgcctccgactccggcggg 240 |||||||||||||||||| ||||| Sbjct: 115249 atggacgcctccgactccagcggg 115226
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cggcgcggcggccgatgcgg 262 |||||||||||||||||||| Sbjct: 202018 cggcgcggcggccgatgcgg 201999
>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence Length = 170969 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cttctcccccctccccacca 91 |||||||||||||||||||| Sbjct: 78378 cttctcccccctccccacca 78397
>gb|AC105345.3| Homo sapiens BAC clone RP11-689P11 from 4, complete sequence Length = 196902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ctgctccctgccccgcctcc 401 |||||||||||||||||||| Sbjct: 63846 ctgctccctgccccgcctcc 63827
>dbj|D89013.1| Homo sapiens DAN gene, complete cds Length = 19874 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 16035 gccggccgccttctcccctctccc 16058
>emb|CR598310.1| full-length cDNA clone CS0DA011YN05 of Neuroblastoma of Homo sapiens (human) Length = 1260 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 810 gccggccgccttctcccctctccc 833
>gb|AE011807.1| Xanthomonas axonopodis pv. citri str. 306, section 185 of 469 of the complete genome Length = 10293 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctccgactccggcgggggcg 244 |||||||||||||||||||| Sbjct: 4183 ctccgactccggcgggggcg 4164
>ref|NM_169260.1| Drosophila melanogaster pumilio CG9755-RB, transcript variant B (pum), mRNA Length = 4928 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 927 cctgccccgcctccgccgctgcca 904
>ref|NM_169259.1| Drosophila melanogaster pumilio CG9755-RD, transcript variant D (pum), mRNA Length = 6643 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2642 cctgccccgcctccgccgctgcca 2619
>ref|NM_169258.1| Drosophila melanogaster pumilio CG9755-RA, transcript variant A (pum), mRNA Length = 6665 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2664 cctgccccgcctccgccgctgcca 2641
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgccctcgtcgcgtcgccgg 67 |||||||||||||||||||| Sbjct: 1632507 cgccctcgtcgcgtcgccgg 1632488
>gb|L07943.1|DROPUM Drosophila melanogaster pumilio protein (pum) mRNA, complete cds Length = 6833 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2836 cctgccccgcctccgccgctgcca 2813
>ref|NM_079561.2| Drosophila melanogaster pumilio CG9755-RC, transcript variant C (pum), mRNA Length = 6809 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2808 cctgccccgcctccgccgctgcca 2785
>dbj|AK142777.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930008M11 product:RIKEN cDNA A630025O09 gene, full insert sequence Length = 4585 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggcgggggcggcgcggcggc 254 |||||||||||||||||||| Sbjct: 8 ggcgggggcggcgcggcggc 27
>gb|AC074331.2|AC074331 Homo sapiens chromosome 19, BAC CTC-204F22 (BC228680), complete sequence Length = 156321 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cccccctccccaccacgccc 96 |||||||||||||||||||| Sbjct: 80266 cccccctccccaccacgccc 80247
>emb|AL773516.3| Mouse DNA sequence from clone RP23-102F9 on chromosome 2, complete sequence Length = 73324 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccggccgccttctcccccctcccc 87 |||||||||| ||||||||||||| Sbjct: 28314 ccggccgcctcctcccccctcccc 28291
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 acgattccctgctcctcccg 333 |||||||||||||||||||| Sbjct: 3175734 acgattccctgctcctcccg 3175753
>gb|AY261520.1| Streptomyces coelicolor telomere-binding protein TapC gene, complete cds Length = 2220 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cggcgcggcggccgatgcgg 262 |||||||||||||||||||| Sbjct: 387 cggcgcggcggccgatgcgg 368
>gb|AY261519.1| Streptomyces lividans telomere-binding protein TapL gene, complete cds Length = 2220 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cggcgcggcggccgatgcgg 262 |||||||||||||||||||| Sbjct: 387 cggcgcggcggccgatgcgg 368
>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence Length = 203106 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 121464 ccttctcccccctccccacc 121483
>gb|AF059736.1|AF059736 Homo sapiens mitoribosomal protein L12 (MRPL12) gene, nuclear gene encoding mitochondrial protein, complete cds Length = 5739 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gacgattccctgctcctccc 332 |||||||||||||||||||| Sbjct: 1479 gacgattccctgctcctccc 1498
>gb|AC139530.3| Homo sapiens chromosome 17, clone RP13-1032I1, complete sequence Length = 159125 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gacgattccctgctcctccc 332 |||||||||||||||||||| Sbjct: 25890 gacgattccctgctcctccc 25871
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 47652 ccggcgggagcggcgcggcggccg 47675
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 85517 ccccgcctccgccgcagcca 85498
>gb|AC116643.11| Homo sapiens BAC clone RP11-637J21 from 4, complete sequence Length = 214284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ctgctccctgccccgcctcc 401 |||||||||||||||||||| Sbjct: 910 ctgctccctgccccgcctcc 891
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgggggcggcgcggcggc 254 |||||||||||||||||||| Sbjct: 67743 ggcgggggcggcgcggcggc 67724
>gb|AC138470.1| Homo sapiens chromosome 19 clone CTC-204F22, complete sequence Length = 156312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cccccctccccaccacgccc 96 |||||||||||||||||||| Sbjct: 76051 cccccctccccaccacgccc 76070
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 ||||||| |||||||||||||||| Sbjct: 27981 ccggcggcggcggcgcggcggccg 27958
>emb|BX649477.10| Zebrafish DNA sequence from clone CH211-265K4 in linkage group 5, complete sequence Length = 148317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 142187 ccttctcccccctccccacc 142168
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccctgccccgcctccgccgc 406 |||||||||||||||||||| Sbjct: 18644 ccctgccccgcctccgccgc 18663
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccctgccccgcctccgccgc 406 |||||||||||||||||||| Sbjct: 126596 ccctgccccgcctccgccgc 126615
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 ||||||| |||||||||||||||| Sbjct: 9257 ccggcggcggcggcgcggcggccg 9234
>dbj|AK105800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A10, full insert sequence Length = 1598 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 135 ccggcgggagcggcgcggcggccg 112
>dbj|AK104087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B10, full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 135 ccggcgggagcggcgcggcggccg 112
>dbj|AK102809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108J10, full insert sequence Length = 2365 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccccgcctccgccgcagcca 411 |||||||||||||||||||| Sbjct: 130 ccccgcctccgccgcagcca 111
>dbj|AK072701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A20, full insert sequence Length = 1559 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 133 ccggcgggagcggcgcggcggccg 110
>dbj|AK071674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L13, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccctgccccgcctccgccgc 406 |||||||||||||||||||| Sbjct: 95 ccctgccccgcctccgccgc 114
>gb|BT021317.1| Drosophila melanogaster RE10602 full insert cDNA Length = 6820 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 2808 cctgccccgcctccgccgctgcca 2785
>dbj|AK067632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O12, full insert sequence Length = 1702 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 133 ccggcgggagcggcgcggcggccg 110
>emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chromosome 22, complete sequence Length = 180455 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 151674 ccttctcccccctccccacc 151693
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tttccagttcccaggaaatg 219 |||||||||||||||||||| Sbjct: 76429 tttccagttcccaggaaatg 76410
>gb|AY106873.1| Zea mays PCO113818 mRNA sequence Length = 1345 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccggcgggggcggcgcggcggccg 256 ||||||||||||||||||| |||| Sbjct: 120 ccggcgggggcggcgcggccgccg 97
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 13683 ccttctcccccctccccacc 13702
>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete sequence Length = 306650 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 cctgccccgcctccgccgcagcca 411 ||||||||||||||||||| |||| Sbjct: 282821 cctgccccgcctccgccgctgcca 282844
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cggcgggggcggcgcggcgg 253 |||||||||||||||||||| Sbjct: 3847428 cggcgggggcggcgcggcgg 3847409 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ctcgggatcgagggcgatcc 365 |||||||||||||||||||| Sbjct: 2000439 ctcgggatcgagggcgatcc 2000458
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 81260 ccttctcccccctccccacc 81279
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 actccggcgggggcggcgcggcgg 253 ||||||||| |||||||||||||| Sbjct: 117789 actccggcgcgggcggcgcggcgg 117812
>emb|AL512588.16| Mouse DNA sequence from clone RP23-140I23 on chromosome 2, complete sequence Length = 92420 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccggccgccttctcccccctcccc 87 |||||||||| ||||||||||||| Sbjct: 48878 ccggccgcctcctcccccctcccc 48855
>gb|AC002103.1|AC002103 Genomic sequence from Human 9q34, complete sequence Length = 38522 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctcccccctccccaccacgc 94 |||||||||||||||||||| Sbjct: 5605 ctcccccctccccaccacgc 5586
>gb|AC000401.1|AC000401 Genomic sequence from Human 9q34, complete sequence Length = 45925 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctcccccctccccaccacgc 94 |||||||||||||||||||| Sbjct: 35954 ctcccccctccccaccacgc 35973
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccttctcccccctccccacc 90 |||||||||||||||||||| Sbjct: 82548 ccttctcccccctccccacc 82529
>gb|M62846.1|K2TKILA Plasmid RK2Te-r (from Klebsiella aerogenes) tellurite resistance (kilA, telA and telB) genes, complete cds Length = 3000 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 122 gcccgccctcttcgcgtcgccggc 145
>emb|AL805924.5| Mouse DNA sequence from clone RP23-329M9 on chromosome X, complete sequence Length = 222134 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggcgctgctccctgccccgc 397 |||||||||||||||||||| Sbjct: 126862 ggcgctgctccctgccccgc 126843
>gb|M62426.1|RK2KILA Plasmid RK2 kilA locus encoding klaA, klaB, and klaC genes Length = 3086 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 144 gcccgccctcttcgcgtcgccggc 167
>gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, RK2, RP1, RP4) complete genome Length = 60099 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gcccgccctcgtcgcgtcgccggc 68 |||||||||| ||||||||||||| Sbjct: 2246 gcccgccctcttcgcgtcgccggc 2223
>dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:956M3, complete sequence Length = 130080 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 40716 gccggccgccttctcccctctccc 40693
>dbj|D28124.1|HUMZAPII Human mRNA for unknown product, complete cds Length = 1929 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gccggccgccttctcccccctccc 86 |||||||||||||||||| ||||| Sbjct: 1451 gccggccgccttctcccctctccc 1474
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccggcgggggcggcgcggcggccg 256 |||||||| ||||||||||||||| Sbjct: 85689 ccggcgggagcggcgcggcggccg 85712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,559,088 Number of Sequences: 3902068 Number of extensions: 3559088 Number of successful extensions: 101342 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98891 Number of HSP's gapped (non-prelim): 2451 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
