ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GCSP_PROMM (Q7V411) Glycine dehydrogenase [decarboxylating] (EC ... 29 5.9

>GCSP_PROMM (Q7V411) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 962

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 274 VPPGDQGEASAPGVELPAIVREIQRIDTIRLYAEATLQLEALVG 405
           V P D  E +AP   LP    E+Q ++ +RL A A     +L+G
Sbjct: 30  VVPPDILETTAPSSSLPEGCGEVQAMEELRLIAAANRVRRSLIG 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,065,420
Number of Sequences: 219361
Number of extensions: 370290
Number of successful extensions: 1847
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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