ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08g10 |
|---|---|
| Clone Library Name | barley_pub |
>SIZ1_ARATH (Q680Q4) Sumoylation ligase E3 (EC 6.-.-.-) (SUMO E3 ligase)| (AtSIZ1) Length = 884 Score = 172 bits (436), Expect = 4e-43 Identities = 80/159 (50%), Positives = 111/159 (69%), Gaps = 2/159 (1%) Frame = +2 Query: 2 DDIYSRKMQIQSAPDLATRSHTGSDL--FRPKDEVNDSFQPQPVTKVRCICDSKLLNDNM 175 DD Y RKMQ+ A DLA++ SD + K E D FQP+ KVRC+C + L D+M Sbjct: 70 DDTY-RKMQVSGASDLASKGQVSSDTSNLKVKGEPEDPFQPE--IKVRCVCGNSLETDSM 126 Query: 176 IQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCRLSRADPFWVTTGNPLPPLK 355 IQCED +CHVWQH+ CV++PDKP +G P +P FYCE+CRL+RADPFWVT +PL P++ Sbjct: 127 IQCEDPRCHVWQHVGCVILPDKPMDG-NPPLPESFYCEICRLTRADPFWVTVAHPLSPVR 185 Query: 356 FMSSGVANDGTSVLQTVEKTFQLSRSG*GTVQRSEYDLQ 472 ++ + NDG S +Q+VE+TFQ++R+ + + EYD+Q Sbjct: 186 LTATTIPNDGASTMQSVERTFQITRADKDLLAKPEYDVQ 224
>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III| Length = 721 Score = 53.1 bits (126), Expect = 3e-07 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = +2 Query: 122 PVTKVRCICDSKL-LNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCR 298 P T VRC+C S+ + D +QC D C WQH SCV + DK ++P +YCE+C Sbjct: 17 PETVVRCVCKSQEDIGDTWVQC--DGCDCWQHASCVGLADK-------DIPESYYCEVCH 67 Query: 299 LSRAD 313 SR+D Sbjct: 68 -SRSD 71
>PHF20_HUMAN (Q9BVI0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58) (Glioma-expressed antigen 2) (Transcription factor TZP) (Novel zinc finger protein) Length = 1012 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +2 Query: 74 DLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEG 253 D+ DE D VRCIC+ + ND MIQCE+ QC WQH C+ + ++ Sbjct: 633 DVTTNPDEELDGDDRYDFEVVRCICEVQEENDFMIQCEECQC--WQHGVCMGLLEE---- 686 Query: 254 VGPEVPPHFYCELCR 298 VP + C +C+ Sbjct: 687 ---NVPEKYTCYVCQ 698
>PHF20_MOUSE (Q8BLG0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58 homolog) Length = 1010 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 134 VRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCR 298 VRCIC+ + ND MIQCE+ QC WQH C+ + ++ VP + C +C+ Sbjct: 656 VRCICEVQEENDFMIQCEECQC--WQHGVCMGLLEE-------NVPEKYTCYVCQ 701
>PHF13_HUMAN (Q86YI8) PHD finger protein 13| Length = 300 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/83 (31%), Positives = 36/83 (43%) Frame = +2 Query: 65 TGSDLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKP 244 TG+D D +DS+ V C C MI+C ++CH W H+SC + Sbjct: 215 TGNDEDIMVDSDDDSWD-----LVTCFCMKPFAGRPMIEC--NECHTWIHLSCAKIRKS- 266 Query: 245 TEGVGPEVPPHFYCELCRLSRAD 313 VP F C+ CR S+ D Sbjct: 267 ------NVPEVFVCQKCRDSKFD 283
>PHF13_MOUSE (Q8K2W6) PHD finger protein 13| Length = 296 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/83 (31%), Positives = 36/83 (43%) Frame = +2 Query: 65 TGSDLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKP 244 TG+D D +DS+ V C C MI+C ++CH W H+SC + Sbjct: 211 TGNDEDIMVDSDDDSWD-----LVTCFCMKPFAGRPMIEC--NECHTWIHLSCAKIRKS- 262 Query: 245 TEGVGPEVPPHFYCELCRLSRAD 313 VP F C+ CR S+ D Sbjct: 263 ------NVPEVFVCQKCRDSKFD 279
>SET3_SCHPO (Q10362) SET domain-containing protein 3| Length = 859 Score = 40.4 bits (93), Expect = 0.002 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +2 Query: 131 KVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCR 298 K+RC+C + + IQCE C VWQH CV + VP ++CE C+ Sbjct: 3 KIRCVCPFEDDDGFTIQCES--CEVWQHAVCVNID-------ANNVPEKYFCEQCQ 49
>YKA5_YEAST (P36106) Hypothetical 67.9 kDa protein RPL14A-AUR1 intergenic| region Length = 594 Score = 39.3 bits (90), Expect = 0.005 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Frame = +2 Query: 20 KMQIQSAPDLATRSHTGSDLFRPKDEVN-DSFQPQPVTKVRCICDSKLLN--------DN 172 K ++ SA + +S + + + + V D VRC+C + N + Sbjct: 34 KKKVDSAIEKNKKSDSSQEPRKDTENVRTDEVDEADEGYVRCLCGANNENYDAAEYSHGD 93 Query: 173 MIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELC 295 M+QC D C WQH+ C+ +G+ E +YCELC Sbjct: 94 MVQC--DGCDTWQHIKCMTDGKDTIDGLMSE-DSKYYCELC 131
>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 660 Score = 37.4 bits (85), Expect = 0.020 Identities = 22/77 (28%), Positives = 33/77 (42%) Frame = +2 Query: 68 GSDLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPT 247 GSDL P + + + CIC +N MI C D C+ W H C+ + +K Sbjct: 5 GSDLEPPDAGDDSKSENGENAPIYCICRKPDINCFMIGC--DNCNEWFHGDCIRITEKMA 62 Query: 248 EGVGPEVPPHFYCELCR 298 + + +YC CR Sbjct: 63 KAI-----REWYCRECR 74
>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6| (CYC8-TUP1-interacting protein 6) Length = 506 Score = 37.4 bits (85), Expect = 0.020 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Frame = +2 Query: 131 KVRCICDSKLLNDN---MIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCRL 301 + RCIC D+ IQCE QC WQH CV + P ++CE CR Sbjct: 72 ETRCICGELDTPDDSGFFIQCE--QCSSWQHGYCVSITQ-------DNAPDKYWCEQCRP 122 Query: 302 SRADPFWVTTG 334 F TG Sbjct: 123 ELHQLFTTDTG 133
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 35.0 bits (79), Expect = 0.099 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +2 Query: 134 VRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCR 298 + CIC +N MI C D C+ W H C+ + +K + + +YC CR Sbjct: 27 IYCICRKPDINCFMIGC--DNCNEWFHGDCIRITEKMAKAI-----REWYCRECR 74
>LIN59_CAEEL (O44757) Protein lin-59 (Abnormal cell lineage protein 59)| Length = 1312 Score = 35.0 bits (79), Expect = 0.099 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = +2 Query: 134 VRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPP-----HFYCELC 295 VRCIC + M+QC D CH W H+ C + E P + C+ C Sbjct: 968 VRCICGALDEEGTMVQC--DTCHFWLHVDCCQYVVRSNEKAQKSKNPPSDDGEYICDFC 1024
>SET3_YEAST (P36124) SET domain protein 3| Length = 751 Score = 34.3 bits (77), Expect = 0.17 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Frame = +2 Query: 17 RKMQIQSAPDLATRSHTGSDLF-----RPKDEVNDSFQPQPVTKV-RCICDSKLLNDN-- 172 +K QSA + AT + + +P+ V DS+ P + CICD LND+ Sbjct: 73 KKATEQSAAEAATSTAAKEETENQPQKQPQWPVPDSYIVDPDAGIITCICD---LNDDDG 129 Query: 173 -MIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELC 295 IQC D C+ WQH C + D +G P + C C Sbjct: 130 FTIQC--DHCNRWQHAICYGIKD-----IG-MAPDDYLCNSC 163
>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A| (Retinoblastoma-binding protein 2) (RBBP-2) Length = 1722 Score = 33.5 bits (75), Expect = 0.29 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPE---VPPHFYCELCRLSR 307 CIC K + M+QCE C W H SCV +P ++ G F C LC SR Sbjct: 1164 CIC-RKTASGFMLQCE--LCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSR 1219
>JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) Length = 1560 Score = 33.1 bits (74), Expect = 0.37 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 10/66 (15%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQCHVWQHMSCVLVP-----DKPTEGVGP-----EVPPHFYCE 289 C+C L +QC D C W H CV VP +P P E F C Sbjct: 1188 CVCGQVLAGAGRLQC--DLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCP 1245 Query: 290 LCRLSR 307 LC SR Sbjct: 1246 LCMRSR 1251
>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1539 Score = 32.0 bits (71), Expect = 0.83 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 10/66 (15%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQCHVWQHMSCVLVP-----DKPTEGVGP-----EVPPHFYCE 289 C+C ++QC D C W H CV VP KP+ P E F C Sbjct: 1175 CVCGQVPAGVGVLQC--DLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCP 1232 Query: 290 LCRLSR 307 LC SR Sbjct: 1233 LCMRSR 1238
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 32.0 bits (71), Expect = 0.83 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = +2 Query: 20 KMQIQSAPDLATRSHTGSDLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQC 199 K++ ++A D+ + DL RPK E + + P + CIC N MI C D+C Sbjct: 237 KLEGKAAQDI--KDEEPGDLGRPKPEC-EGYDPNALY---CICRQPHNNRFMICC--DRC 288 Query: 200 HVWQHMSCV 226 W H CV Sbjct: 289 EEWFHGDCV 297
>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with| SET1 protein SPP1) (Set1C component SPP1) (Suppressor of PRP protein 1) Length = 353 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +2 Query: 134 VRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCR 298 V CIC + M+ C D C W H +C+ +P++ + V FYC C+ Sbjct: 23 VYCICKRPDYGELMVGC--DGCDDWFHFTCLHIPEQFKDLVF-----SFYCPYCQ 70
>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1548 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQCHVWQHMSCVLVP 235 CIC +QC D CH W H CV VP Sbjct: 1183 CICGQVCAGVESLQC--DLCHDWFHGQCVTVP 1212
>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)| Length = 1535 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 10/66 (15%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQCHVWQHMSCVLVP-----DKPTEGVGP-----EVPPHFYCE 289 C+C +QC D C W H CV VP KP+ P E F C Sbjct: 1175 CVCGQVPAGVGALQC--DLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCP 1232 Query: 290 LCRLSR 307 LC SR Sbjct: 1233 LCMRSR 1238
>IFT88_MOUSE (Q61371) Intraflagellar transport 88 homolog (Tetratricopeptide| repeat protein 10) (TPR repeat protein 10) (Recessive polycystic kidney disease protein Tg737) (TgN(Imorpk)737Rpw) Length = 824 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -1 Query: 144 MQRTLVTGCGWKESLTSSLGRNKSDPVWDLVAR 46 + R + TG G K SLTSS+GR + + D VAR Sbjct: 60 VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVAR 92
>VRP2_SALTY (P21454) 65 kDa virulence protein| Length = 591 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 227 LVPDKPTEGVGPEVPPHFYCELCRLSRADPF 319 LV D GV P+VPP F + L+R DPF Sbjct: 263 LVFDYGERGVDPQVPPAFTAQNSWLARQDPF 293
>VRP2_SALEN (P55220) 65 kDa virulence protein| Length = 591 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 227 LVPDKPTEGVGPEVPPHFYCELCRLSRADPF 319 LV D GV P+VPP F + L+R DPF Sbjct: 263 LVFDYGERGVDPQVPPAFTAQNSWLARQDPF 293
>VRP2_SALCH (P17450) 65 kDa virulence protein (Protein M2 in mba region)| Length = 591 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 227 LVPDKPTEGVGPEVPPHFYCELCRLSRADPF 319 LV D GV P+VPP F + L+R DPF Sbjct: 263 LVFDYGERGVDPQVPPAFTAQNSWLARQDPF 293
>VRP2_SALDU (P24419) 65 kDa virulence protein| Length = 593 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 227 LVPDKPTEGVGPEVPPHFYCELCRLSRADPF 319 LV D GV P+VPP F + L+R DPF Sbjct: 263 LVFDYGERGVDPQVPPAFTAQNSWLARQDPF 293
>K1718_MOUSE (Q3UWM4) Protein KIAA1718| Length = 940 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +2 Query: 116 PQPVTKVRCICDSKL-LNDNMIQCEDDQCHVWQHMSCVLVPD 238 P P V C+C +N MI+C D C W H SCV V + Sbjct: 32 PPPPPPVYCVCRQPYDVNRFMIEC--DVCKDWFHGSCVGVEE 71
>YNG2_DEBHA (Q6BNL6) Chromatin modification-related protein YNG2 (ING1 homolog| 2) Length = 285 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = +2 Query: 14 SRKMQIQSAPDLATRSHTGSDLFRPKDEVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDD 193 +R + + D + + L RP + ++ + + C C + MI C++D Sbjct: 187 TRPSKRMKSEDFEDKKYDNDSLSRPNEGPGNNGEDAD-NNLYCFCQRVSFGE-MIGCDND 244 Query: 194 QCHV-WQHMSCVLVPDKPTE 250 C W H SCV + P + Sbjct: 245 DCKFEWFHWSCVGITAPPKD 264
>PRXC_CURIN (P49053) Vanadium chloroperoxidase (EC 1.11.1.10) (VCPO) (Vanadium| chloride peroxidase) Length = 609 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 9/50 (18%) Frame = +2 Query: 296 RLSRADPFWVTTGNPL---------PPLKFMSSGVANDGTSVLQTVEKTF 418 R DPFW+T G P PP SG A G +V Q V + + Sbjct: 370 RPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYY 419
>K1718_HUMAN (Q6ZMT4) Protein KIAA1718| Length = 941 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +2 Query: 116 PQPVTKVRCICDSKL-LNDNMIQCEDDQCHVWQHMSCVLVPD 238 P P V C+C +N MI+C D C W H SCV V + Sbjct: 32 PPPPPPVYCVCRQPYDVNRFMIEC--DICKDWFHGSCVGVEE 71
>DUSC_SALTY (Q8ZNM4) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 312 Score = 28.5 bits (62), Expect = 9.2 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -2 Query: 272 VELQGQHPQWAYLERAHSSYVAIHGID 192 ++L GQHPQW A ++ + +G+D Sbjct: 67 IQLLGQHPQWLAENAARATALGSYGVD 93
>DUSC_SALTI (Q8Z5B2) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 312 Score = 28.5 bits (62), Expect = 9.2 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -2 Query: 272 VELQGQHPQWAYLERAHSSYVAIHGID 192 ++L GQHPQW A ++ + +G+D Sbjct: 67 IQLLGQHPQWLAENAARATALGSYGVD 93
>DUSC_PASMU (Q9CJW1) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 312 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 272 VELQGQHPQWAYLERAHSSYVAIHGID 192 V+L GQHPQW + + HGID Sbjct: 67 VQLLGQHPQWLAENAQRAIELGSHGID 93
>YNG2_YARLI (Q6C5V7) Chromatin modification-related protein YNG2 (ING1 homolog| 2) Length = 283 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +2 Query: 140 CICDSKLLNDNMIQCEDDQC-HVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCRLSR 307 C C + M+ C++D C + W H CV + + P +GV ++C C R Sbjct: 229 CFCQQPSFGE-MVACDNDDCQYEWFHYDCVGLAE-PPQGV-------WFCPSCSKGR 276
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = +2 Query: 125 VTKVRCICD------SKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYC 286 +TK + +C + L + + ++C D C VW H +C + K + +G +YC Sbjct: 409 LTKPKHVCGICKRIWNHLDSQSWVRC--DGCKVWIHSACDQISHKHFKDLG---ETDYYC 463 Query: 287 ELCR 298 CR Sbjct: 464 PTCR 467
>VGLE_PRVRI (P08354) Glycoprotein GI precursor| Length = 577 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 182 CEDDQCHVWQHMSCVLVPDKPTEGVGPEVPPHFYCELCRLSRADP 316 C + CH + VP+ P G+G +PP E+ RL R P Sbjct: 126 CFETACHPDLVLGRACVPEAPERGIGDYLPP----EVPRLQREPP 166
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +2 Query: 95 EVNDSFQPQPVTKVRCICDSKLLNDNMIQCEDDQCHVWQHMSCVLVPDKPTEGVGPEVPP 274 E D ++P+P C+CDS + C+D C D+P + PE+P Sbjct: 41 ESRDVWKPEPCQI--CVCDS-----GSVLCDDIMCD-----------DEPLDCPNPEIPF 82 Query: 275 HFYCELC 295 C +C Sbjct: 83 GECCAIC 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,793,003 Number of Sequences: 219361 Number of extensions: 1541784 Number of successful extensions: 3879 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3760 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3860 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
