>ref|XM_475548.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2628

 Score =  192 bits (97), Expect = 7e-46
 Identities = 151/169 (89%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctgaagttccaccccatttctactgtgaattatgccgactaagtcgggcagacccgtttt 320
           ||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 464 ctgaagttccacccgttttctactgtgaattatgccgactgagtcgggcagacccatttt 523

                                                                       
Query: 321 gggtcactacagggaatccattaccccctctaaaattcatgtcatctggtgttgcaaatg 380
           |||||||| | || |||||||||| |||  | |||||| |||||||||||||| ||||||
Sbjct: 524 gggtcactgctggaaatccattactcccagtgaaattcgtgtcatctggtgttacaaatg 583

                                                            
Query: 381 atggaacaagtgtacttcaaaccgtggagaaaaccttccaactttctcg 429
           ||||||||||||||| |||||  |||||||||| |||||| ||||||||
Sbjct: 584 atggaacaagtgtacctcaaagtgtggagaaaagcttccagctttctcg 632



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 16  caggaaaatgcaaatccaatctgctcccgatctagccac 54
           |||||||||||||||||||| |||||| |||||||||||
Sbjct: 228 caggaaaatgcaaatccaatgtgctcctgatctagccac 266



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 173 atgatccagtgtgaggatgatcaatgccatgtatggcaacatatgagctgtgtgctcgtt 232
           |||||||||||||| ||| | | |||||| || ||||||||| |||  ||||| ||| ||
Sbjct: 382 atgatccagtgtgaagatcagcgatgccaagtgtggcaacatttgaattgtgtactcatt 441

                      
Query: 233 ccagataagcc 243
           |||||||||||
Sbjct: 442 ccagataagcc 452

>dbj|AK105290.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F09, full
           insert sequence
          Length = 3393

 Score =  192 bits (97), Expect = 7e-46
 Identities = 151/169 (89%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctgaagttccaccccatttctactgtgaattatgccgactaagtcgggcagacccgtttt 320
           ||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 714 ctgaagttccacccgttttctactgtgaattatgccgactgagtcgggcagacccatttt 773

                                                                       
Query: 321 gggtcactacagggaatccattaccccctctaaaattcatgtcatctggtgttgcaaatg 380
           |||||||| | || |||||||||| |||  | |||||| |||||||||||||| ||||||
Sbjct: 774 gggtcactgctggaaatccattactcccagtgaaattcgtgtcatctggtgttacaaatg 833

                                                            
Query: 381 atggaacaagtgtacttcaaaccgtggagaaaaccttccaactttctcg 429
           ||||||||||||||| |||||  |||||||||| |||||| ||||||||
Sbjct: 834 atggaacaagtgtacctcaaagtgtggagaaaagcttccagctttctcg 882



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 16  caggaaaatgcaaatccaatctgctcccgatctagccactaggtcccatactggatcaga 75
           |||||||||||||||||||| |||||| ||||||||||| |||  ||| |  ||||||||
Sbjct: 478 caggaaaatgcaaatccaatgtgctcctgatctagccaccaggagccacagcggatcaga 537

              
Query: 76  ttt 78
           |||
Sbjct: 538 ttt 540



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 173 atgatccagtgtgaggatgatcaatgccatgtatggcaacatatgagctgtgtgctcgtt 232
           |||||||||||||| ||| | | |||||| || ||||||||| |||  ||||| ||| ||
Sbjct: 632 atgatccagtgtgaagatcagcgatgccaagtgtggcaacatttgaattgtgtactcatt 691

                      
Query: 233 ccagataagcc 243
           |||||||||||
Sbjct: 692 ccagataagcc 702

>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                      
Query: 261   ctgaagttccaccccatttctactgtgaattatgccgactaagtcgggcagacccgt 317
             ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 30300 ctgaagttccacccgttttctactgtgaattatgccgactgagtcgggcagacccgt 30356



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 14    agcaggaaaatgcaaatccaatctgctcccgatctagccactaggtcccatactggatca 73
             |||||||||||||||||||||| |||||| ||||||||||| |||  ||| |  ||||||
Sbjct: 29948 agcaggaaaatgcaaatccaatgtgctcctgatctagccaccaggagccacagcggatca 30007

                  
Query: 74    gattt 78
             |||||
Sbjct: 30008 gattt 30012



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 317   ttttgggtcactacagggaatccattaccccctctaaaattcatgtcatctggtgttgca 376
             |||||||||||| | || |||||||||| |||  | |||||| |||||||||||||| ||
Sbjct: 30797 ttttgggtcactgctggaaatccattactcccagtgaaattcgtgtcatctggtgttaca 30856

                     
Query: 377   aatgatgg 384
             ||||||||
Sbjct: 30857 aatgatgg 30864



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 384   gaacaagtgtacttcaaaccgtggagaaaaccttccaactttctcg 429
             |||||||||||| |||||  |||||||||| |||||| ||||||||
Sbjct: 31457 gaacaagtgtacctcaaagtgtggagaaaagcttccagctttctcg 31502



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 179   cagtgtgaggatgatcaatgccatgtatggcaacatatgagctgtgtgctcgttccagat 238
             |||||||| ||| | | |||||| || ||||||||| |||  ||||| ||| ||||||||
Sbjct: 30224 cagtgtgaagatcagcgatgccaagtgtggcaacatttgaattgtgtactcattccagat 30283

                  
Query: 239   aagcc 243
             |||||
Sbjct: 30284 aagcc 30288

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                        
Query: 261     ctgaagttccaccccatttctactgtgaattatgccgactaagtcgggcagacccgt 317
               ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1368638 ctgaagttccacccgttttctactgtgaattatgccgactgagtcgggcagacccgt 1368694



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                        
Query: 14      agcaggaaaatgcaaatccaatctgctcccgatctagccac 54
               |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1368286 agcaggaaaatgcaaatccaatgtgctcctgatctagccac 1368326



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                           
Query: 317     ttttgggtcactacagggaatccattaccccctctaaaattcatgtcatctggtgttgca 376
               |||||||||||| | || |||||||||| |||  | |||||| |||||||||||||| ||
Sbjct: 1369135 ttttgggtcactgctggaaatccattactcccagtgaaattcgtgtcatctggtgttaca 1369194

                       
Query: 377     aatgatgg 384
               ||||||||
Sbjct: 1369195 aatgatgg 1369202



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                             
Query: 384     gaacaagtgtacttcaaaccgtggagaaaaccttccaactttctcg 429
               |||||||||||| |||||  |||||||||| |||||| ||||||||
Sbjct: 1369795 gaacaagtgtacctcaaagtgtggagaaaagcttccagctttctcg 1369840



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 179     cagtgtgaggatgatcaatgccatgtatggcaacatatgagctgtgtgctcgttccagat 238
               |||||||| ||| | | |||||| || ||||||||| |||  ||||| ||| ||||||||
Sbjct: 1368562 cagtgtgaagatcagcgatgccaagtgtggcaacatttgaattgtgtactcattccagat 1368621

                    
Query: 239     aagcc 243
               |||||
Sbjct: 1368622 aagcc 1368626

>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 16     caggaaaatgcaaatccaatct 37
              ||||||||||||||||||||||
Sbjct: 141337 caggaaaatgcaaatccaatct 141358

>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    caggaaaatgcaaatccaatct 37
             ||||||||||||||||||||||
Sbjct: 13964 caggaaaatgcaaatccaatct 13985

>gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, complete sequence
          Length = 209618

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 350  ctaaaattcatgtcatctggt 370
            |||||||||||||||||||||
Sbjct: 1275 ctaaaattcatgtcatctggt 1255

>gb|AC134583.5| Mus musculus BAC clone RP24-94C12 from chromosome 8, complete sequence
          Length = 184447

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   ctaaaattcatgtcatctggt 370
             |||||||||||||||||||||
Sbjct: 26854 ctaaaattcatgtcatctggt 26874

>gb|AC123833.3| Mus musculus BAC clone RP24-127A22 from chromosome 13, complete
             sequence
          Length = 146493

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 352   aaaattcatgtcatctggtgt 372
             |||||||||||||||||||||
Sbjct: 15043 aaaattcatgtcatctggtgt 15023

>emb|AL049843.18|HSJ392M17 Human DNA sequence from clone RP3-392M17 on chromosome 6p12.3-21.2
             Contains an ATPase H+ transporting lysosomal (ATP6C)
             pseudogene, the RDS gene for retinal degeneration slow
             (retinitis pigmentosa 7), the 3' end of the UBR2 gene for
             ubiquitin protein ligase E3 component n-recognin 2 and a
             CpG island, complete sequence
          Length = 110900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    agcaggaaaatgcaaatccaa 34
             |||||||||||||||||||||
Sbjct: 16473 agcaggaaaatgcaaatccaa 16453

>gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, complete sequence
          Length = 176903

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tgatatatacagcaggaaaat 24
             |||||||||||||||||||||
Sbjct: 32150 tgatatatacagcaggaaaat 32130

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 168     ataatatgatccagtgtgagg 188
               |||||||||||||||||||||
Sbjct: 1322787 ataatatgatccagtgtgagg 1322767

>emb|CT009486.7| Mouse DNA sequence from clone RP23-44G15 on chromosome 13, complete
             sequence
          Length = 180092

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   aaaattcatgtcatctggtgt 372
             |||||||||||||||||||||
Sbjct: 19942 aaaattcatgtcatctggtgt 19962

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tggccctgaagttccacccc 275
              ||||||||||||||||||||
Sbjct: 464324 tggccctgaagttccacccc 464343

>emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chromosome 10 Contains the
             3'end of a novel gene, complete sequence
          Length = 100443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    caggaaaatgcaaatccaatctgc 39
             ||||||||||||||||||| ||||
Sbjct: 20260 caggaaaatgcaaatccaagctgc 20237

>emb|AL121988.10|HSDJ34M23 Human DNA sequence from clone RP1-34M23 on chromosome 1p34.3-36.11
             Contains the 3' end of a variant of a novel gene, the GJB5
             gene for gap junction protein, beta 5 (connexin 31.1), the
             GJB4 gene for gap junction protein, beta 4 (connexin
             30.3), the GJB3 gene for gap junction protein, beta 3,
             31kDa (connexin 31) and the GJA4 gene for gap junction
             protein, alpha 4, 37kDa (connexin 37), complete sequence
          Length = 126876

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   cccctctaaaattcatgtca 364
             ||||||||||||||||||||
Sbjct: 25689 cccctctaaaattcatgtca 25708

>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     taggtcccatactggatcag 74
              ||||||||||||||||||||
Sbjct: 156070 taggtcccatactggatcag 156051

>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216621

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     atacagcaggaaaatgcaaa 29
              ||||||||||||||||||||
Sbjct: 137879 atacagcaggaaaatgcaaa 137860

>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 226168

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     atacagcaggaaaatgcaaa 29
              ||||||||||||||||||||
Sbjct: 140752 atacagcaggaaaatgcaaa 140733


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,820,825
Number of Sequences: 3902068
Number of extensions: 3820825
Number of successful extensions: 90476
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90392
Number of HSP's gapped (non-prelim): 82
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)