ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 56 2e-08
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 42 6e-04

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 31/50 (62%), Positives = 31/50 (62%)
 Frame = +2

Query: 89  MAAAAGDVEXXXXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVR 238
           MAAAAGDVE                   VLERLEAPATRAEARRLLGAVR
Sbjct: 1   MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAPATRAEARRLLGAVR 50



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>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1091

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 26/53 (49%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +2

Query: 89  MAAAAG---DVEXXXXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVR 238
           MAA AG   DV+                   VLERL APATR  ARRLLGAVR
Sbjct: 1   MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAPATRPAARRLLGAVR 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.130    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,821,700
Number of Sequences: 219361
Number of extensions: 233112
Number of successful extensions: 854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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