>ZCHC8_CHICK (Q5F3D1) Zinc finger CCHC domain-containing protein 8|
          Length = 613

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = -3

Query: 376 PKSMKISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRA 197
           P+S+  +QP+    PP P+T +S     D S P+  + T  + +    E    L+EQ R 
Sbjct: 384 PRSLTPTQPSTPTHPPLPNTVSSLNPSSDVSQPKIVDSTMDEDTLTLEE----LEEQQRL 439

Query: 196 EQSSVAEARA 167
             +++ +A +
Sbjct: 440 IWAALEQAES 449

>GMIP_HUMAN (Q9P107) GEM-interacting protein (GMIP)|
          Length = 970

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -3

Query: 373 KSMKISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAE 194
           +S    + +A  + P PS    RRRR  E    + +  +  + +  RE  A+  +   A+
Sbjct: 230 RSQGSPEDSAPQASPGPSKQQERRRRSREEAQAKAQEAEALYQACVREANARQQDLEIAK 289

Query: 193 QSSVAEAR 170
           Q  V+  R
Sbjct: 290 QRIVSHVR 297

>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 297 GSMNRRRKNKNTQMANTPQQREREGLNSTSRTEQSRAR 184
           G +  R KNK   +   PQ+R  E  +S  R E SR R
Sbjct: 83  GDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGR 120

>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 21  RPSDFPPPHLAFFTCPPPRP 80
           RP   PPPHL  F   PPRP
Sbjct: 754 RPPGMPPPHLQRFPMMPPRP 773

>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 21  RPSDFPPPHLAFFTCPPPRP 80
           RP   PPPHL  F   PPRP
Sbjct: 861 RPPGMPPPHLQRFPLMPPRP 880

>GAK_HUMAN (O14976) Cyclin G-associated kinase (EC 2.7.11.1)|
          Length = 1311

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = -3

Query: 358 SQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQS 188
           ++PT S+SPP  S   SR     +   +++  T  +++S+     A +++++ +E S
Sbjct: 773 AEPTDSDSPPSSSADASRFLHTLDWQEEKEAETGAENASSKESESALMEDRDESEVS 829

>YKI5_CAEEL (P46012) Hypothetical protein C01G6.5|
          Length = 952

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -3

Query: 358 SQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQSSVA 179
           S P  S+   +  T++ + ++LDES+       DG+    + +R  K     R  +S+ A
Sbjct: 720 STPAESSKRKQKDTSSRKMKQLDESSADSDSEDDGRSGDKSTKRRDKARRSTRIGKSTPA 779

Query: 178 E 176
           +
Sbjct: 780 K 780

>ATF7_MOUSE (Q8R0S1) Cyclic AMP-dependent transcription factor ATF-7|
           (Activating transcription factor 7) (Transcription
           factor ATF-A)
          Length = 413

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 376 PKSMKISQPTASNSPPKPSTATSRRRRLDESTPQ-EQEHTDGKHSSATRER 227
           P +   +QP  S + P PST   RRR +DE   +  Q   +   ++A+R R
Sbjct: 300 PDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCR 350

>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor|
           (Probable G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -3

Query: 379 FPKSMKISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSS 242
           FP+++       S SP   S   S RRRL  S+ QE E T   H S
Sbjct: 726 FPEALARQHSRDSGSPGHGSLPGSSRRRLLSSSLQEPEGTPALHKS 771

>LRBA_HUMAN (P50851) Lipopolysaccharide-responsive and beige-like anchor protein|
            (CDC4-like protein) (Beige-like protein)
          Length = 2863

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
 Frame = -3

Query: 370  SMKISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTD----GKHSSATRERGAKLDEQN 203
            SM +S+ TAS S P    A+     LD+S  +E+E  D        S T E     + Q+
Sbjct: 1072 SMTVSEVTASISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQD 1131

Query: 202  RAEQSSVAEA 173
             +   + +EA
Sbjct: 1132 NSLSPAASEA 1141

>ATF7_HUMAN (P17544) Cyclic AMP-dependent transcription factor ATF-7|
           (Activating transcription factor 7) (Transcription
           factor ATF-A)
          Length = 494

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 376 PKSMKISQPTASNSPPKPSTATSRRRRLDESTPQ-EQEHTDGKHSSATRER 227
           P +   +QP  S + P PST   RRR +DE   +  Q   +   ++A+R R
Sbjct: 311 PDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCR 361

>ATF7_PONPY (Q5R9C9) Cyclic AMP-dependent transcription factor ATF-7|
           (Activating transcription factor 7) (Transcription
           factor ATF-A)
          Length = 483

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 376 PKSMKISQPTASNSPPKPSTATSRRRRLDESTPQ-EQEHTDGKHSSATRER 227
           P +   +QP  S + P PST   RRR +DE   +  Q   +   ++A+R R
Sbjct: 300 PDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCR 350

>VE2_HPV23 (P50769) Regulatory protein E2|
          Length = 431

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -1

Query: 294 SMNRRRKNKNTQMANTPQQREREGLNSTSRTEQSRARWLKLGRRGGGDLSR 142
           S NRR   K +    T ++++R+G  + +R  ++R+R     +RGG +  R
Sbjct: 229 STNRRYGRKASSPTATTRRQKRQGKETLTRRRKTRSRSRSREQRGGRETQR 279

>BCOR_HUMAN (Q6W2J9) BCoR protein (BCL-6 corepressor)|
          Length = 1755

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = -3

Query: 349 TASNSPPKPSTATSRRRRLDESTPQEQEH------TDGKHSSATRERGAK 218
           +AS +P   +  T   R   E+TP   +H      T  KHSS+T  +GAK
Sbjct: 569 SASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAK 618

>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)|
          Length = 472

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -3

Query: 307 RRRRLDESTPQEQEHTDGK-HSSATRERGAKLDEQNRAEQSSVAEA 173
           ++R++    PQ+++H+D + HSSA+ +      EQ +    +  +A
Sbjct: 5   KKRKIAREAPQQEDHSDSEAHSSASEDAAPNTTEQEQEPSEAPKQA 50

>FOSB_HUMAN (P53539) Protein fosB (G0/G1 switch regulatory protein 3)|
          Length = 338

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = -3

Query: 358 SQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKH------SSATRERGAKLDEQNRA 197
           S  T+   P +P+ A  RR R +  TP+E+E    +       ++  R R  +L ++ +A
Sbjct: 126 SGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQA 185

Query: 196 EQSSVAEARA 167
           E   + E +A
Sbjct: 186 ETDQLEEEKA 195

>MRP4_HUMAN (O15439) Multidrug resistance-associated protein 4|
           (MRP/cMOAT-related ABC transporter) (Multi-specific
           organic anion transporter-B) (MOAT-B)
          Length = 1325

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = -3

Query: 343 SNSPPKPSTATSRRRRLDESTPQEQEHT-----DGK-HSSATRERGAKLDEQNRAE 194
           S  PP P T T R R   ES+   Q+ +     DG   S  T      L E+NR+E
Sbjct: 638 SEQPPVPGTPTLRNRTFSESSVWSQQSSRPSLKDGALESQDTENVPVTLSEENRSE 693

>PAM17_NEUCR (Q7SEE1) Presequence translocated-associated motor subunit pam-17,|
           mitochondrial precursor
          Length = 267

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
 Frame = -3

Query: 382 PFPKSMKISQPTASNS-PPKPSTATSRRRRLDESTPQEQE-----HTDGKHSSATRERGA 221
           PF  + K+SQPT+       PS    R R   ++   +Q+      +    SS+TR R  
Sbjct: 35  PFSMNTKLSQPTSVRPLSTSPSALVLRFRAQQQAQLAQQQLRRASSSSSSSSSSTRPRSD 94

Query: 220 KLDEQNRAEQSSVAEARA 167
              + N AE ++ A++ A
Sbjct: 95  AELDANAAEAAAAAQSAA 112

>HR38_BOMMO (P49870) Probable nuclear hormone receptor HR38 (bHR38) (Fragment)|
          Length = 360

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 314 GCAGFWRRIARRGLADFHALRERSCLSQSRRRS 412
           GC GF++R  ++G + +  L E+SC    RRR+
Sbjct: 45  GCKGFFKRTVQKG-SKYVCLAEKSCPVDKRRRN 76

>FOSB_CANFA (Q9TUB3) Protein fosB|
          Length = 338

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = -3

Query: 358 SQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKH------SSATRERGAKLDEQNRA 197
           S  T+   P +P+ A  RR R +  TP+E+E    +       ++  R R  +L ++ +A
Sbjct: 126 SGTTSGPGPARPARARLRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQA 185

Query: 196 EQSSVAEARA 167
           E   + E +A
Sbjct: 186 ETDQLEEEKA 195

>YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I|
          Length = 886

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   PSLSS--VRPSDFPPPHLAFFTCPPPRPRSLSAAL 101
           PS++S  + PSD+ P H  F + P P PR +S  +
Sbjct: 279 PSMASSVLSPSDYFPQHRRFQSAPAPIPRPVSTLI 313

>PTP4_CAEEL (P34442) Probable tyrosine-protein phosphatase F54C8.4 (EC|
           3.1.3.48)
          Length = 359

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = -3

Query: 373 KSMKISQPTAS--NSPPKPSTAT-SRRRRLDESTPQEQEHTD---GKHSSATRERGAKLD 212
           K  +++QP A+  N+PP+PS  T       +E   + +E T+   GK  S + +R A+ +
Sbjct: 267 KYAQLNQPVANGANTPPEPSEGTPQEEEEFEEDFEEIEEETETEPGKGQSVSSKRRARRN 326

Query: 211 EQNRAEQ 191
              +  Q
Sbjct: 327 RMQKYMQ 333

>PATL5_ARATH (Q9M0R2) Patellin-5|
          Length = 668

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = -3

Query: 355 QPTASNSPPKPSTATS--RRRRLDESTPQEQEHTDGKHS-SATRERGAKLDEQNRAEQSS 185
           QP     PP PST TS    R L E   +E+   + K      R  G+  +E N+    S
Sbjct: 243 QPEPQTPPPPPSTTTSTVASRSLAEMMNREEAEVEEKQKIQIPRSLGSFKEETNKISDLS 302

Query: 184 VAEARA 167
             E  A
Sbjct: 303 ETELNA 308

>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1196

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +3

Query: 3   PSLSSVRPSDFPPPHLAFFTCPPPRPRSLSAALT 104
           PSLS   P   PPP     +CPPP P  L    T
Sbjct: 580 PSLSGGPPPPPPPPPPITGSCPPPPPPPLPPPAT 613

>USP_CHOFU (O76202) Protein ultraspiracle homolog|
          Length = 472

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 314 GCAGFWRRIARRGLADFHALRERSCLSQSRRRS 412
           GC GF++R  R+ L+ +    ER+C+   R+R+
Sbjct: 138 GCKGFFKRTVRKDLS-YACREERNCIIDKRQRN 169

>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -3

Query: 331 PKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQSSVAEARA 167
           P P T  +      E   +E+EH +G+H     +     +E+++ E+    E ++
Sbjct: 362 PSPLTDVTTPEEHKEGEHKEEEHKEGEHKEGEHKEEEHKEEEHKKEEHKSKEHKS 416

>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2|
          Length = 1068

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 12  SSVRPSDFPPPH--LAFFTCPPPRPRSL 89
           SS+  +D PPP   L F  CPPP P  L
Sbjct: 533 SSMTTNDLPPPPPPLPFACCPPPPPPPL 560

>PHOSP_PI1HC (P28054) Phosphoprotein (Protein P)|
          Length = 568

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -3

Query: 364 KISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQSS 185
           + S+   S +P   +    R  R+DE +P E+ H   + S  T E     ++ N+ E+  
Sbjct: 113 RASRRGTSPNPLPENMGNERNTRIDEDSPNERRH---QRSVLTDEDRKMAEDSNKREEDQ 169

Query: 184 V 182
           V
Sbjct: 170 V 170

>PHOSP_PI1HB (P32530) Phosphoprotein (Protein P)|
          Length = 568

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -3

Query: 364 KISQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQSS 185
           + S+   S +P   +    R  R+DE +P E+ H   + S  T E     ++ N+ E+  
Sbjct: 113 RASRRGTSPNPLPENMGNERNTRIDEDSPNERRH---QRSVLTDEDRKMAEDSNKREEDQ 169

Query: 184 V 182
           V
Sbjct: 170 V 170

>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 349  TASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQS 188
            TA+ +   P    S +R   +S  Q    +D +  S   ERG  L+E N+ EQS
Sbjct: 1307 TANTNTQDPFLIGSSKRMRHQSESQGVGLSDKELVSDDEERGTGLEEDNQEEQS 1360

>SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)|
          Length = 1695

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
 Frame = -3

Query: 376 PKSMKISQP------------TASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATR 233
           P SM +SQ             T S     P  A++RRRR+  S P++        SSAT 
Sbjct: 146 PLSMSVSQSGINGKHTGGNLTTGSPRTATPRGASARRRRISRSPPRQTPSRTRSQSSATS 205

Query: 232 ERGAKLDEQNRAEQS 188
                     R+++S
Sbjct: 206 APNDPTSHNARSKRS 220

>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 28/88 (31%)
 Frame = -3

Query: 358  SQPTASNSPPK------------PSTATSRRRRLDESTPQEQEHT--------------- 260
            SQP AS +PPK            P+   ++    ++  P   + T               
Sbjct: 748  SQPPASQAPPKEAAQAQPPPKAAPTKKETKPLASEKLGPMASDSTLTTKGSDLEKKPSLA 807

Query: 259  -DGKHSSATRERGAKLDEQNRAEQSSVA 179
             D KH +A  ++ A+L EQ +A Q  V+
Sbjct: 808  KDSKHQTAEAKKPAELSEQEKASQPKVS 835

>DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx)|
          Length = 739

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 358 SQPTASNSPPKPSTATSRRRRLDESTPQEQEHTDGKHSSATRERGAKLDEQNRAEQ 191
           +QP  SN PP P++         ++T   +   DG  S++   +  KLD +   E+
Sbjct: 20  AQPGPSNLPPNPASTGPGPGLSQQATGLSEPRVDGGSSNSGSRKCYKLDNEKLFEE 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,401,831
Number of Sequences: 219361
Number of extensions: 782545
Number of successful extensions: 4423
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4393
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)