>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 771

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 102 DADREGENQSPSLSEENQVDLDLDAGNKGK 13
           D+D EGEN+ P L EE++VD +L    K K
Sbjct: 27  DSDSEGENEIPDLEEESEVDQELKEEEKPK 56

>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = -3

Query: 328 SESPMAMAARTD*SENLVRARIAHADLD*DPPRRKESISSSISPYILDQSPSLPEENQTP 149
           S SP   + R   S++  R+R   AD        ++S S S SP  +D+SPS P  +++P
Sbjct: 238 SRSPPKRSRRESKSKSRSRSRSRSAD-------NRKSRSPSRSPKKVDRSPSPPRGSRSP 290

Query: 148 SISG 137
           S  G
Sbjct: 291 SEKG 294

>YQS1_CAEEL (Q09309) Hypothetical WD-repeat protein F21H12.1|
          Length = 454

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 101 SHKCLDPVCIDWSRDGRRLI 160
           S  CL   C+ WSRDGR+L+
Sbjct: 64  SAHCLPVSCLSWSRDGRKLL 83

>DDFL1_MOUSE (Q5U464) Development and differentiation enhancing factor-like 1|
          Length = 904

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 238 PPRRKESISSSISPYILDQSPSLPEE--NQTPSISGP 134
           P     S++SS+ P  L Q+PS PEE   ++ SIS P
Sbjct: 796 PASSSSSLTSSVEPGGLSQAPSSPEEGLQESASISRP 832

>MPP3_HUMAN (Q13368) MAGUK p55 subfamily member 3 (MPP3 protein) (Discs large|
           homolog 3)
          Length = 585

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 250 LD*DPPRRKESISSSISPYILDQSPSLPEENQTPSIS 140
           +D +P   K+  +S   PYI+   P++ E+ +TP +S
Sbjct: 481 VDVEPEALKQLRTSEFKPYIIFVKPAIQEKRKTPPMS 517

>CC020_HUMAN (Q8ND61) Protein C3orf20|
          Length = 904

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -1

Query: 246 IKTHQEGKNLFHHQSVHIYWINHLPSLKKIKRLPSLDQSMHTGSRHL 106
           ++THQE  N F  QS+H+     L  L ++K + ++ +SM  G+  L
Sbjct: 127 VRTHQETLNRFQQQSIHL-----LTELLRLK-MKAMVESMSVGANPL 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,553,793
Number of Sequences: 219361
Number of extensions: 1505061
Number of successful extensions: 3505
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3502
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)