Clone Name | bastl08g04 |
---|---|
Clone Library Name | barley_pub |
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 85.5 bits (210), Expect = 5e-17 Identities = 42/69 (60%), Positives = 47/69 (68%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 L+AVLKE VDLENIP+EEV +NLRC+REGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKESKFLKFLG 67 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 68 FMWNPLSWV 76
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 84.7 bits (208), Expect = 9e-17 Identities = 41/69 (59%), Positives = 47/69 (68%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKESKFSKFLG 67 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 68 FMWNPLSWV 76
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 84.0 bits (206), Expect = 2e-16 Identities = 41/69 (59%), Positives = 47/69 (68%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 9 LDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKLLKFLG 68 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 69 FMWNPLSWV 77
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 83.6 bits (205), Expect = 2e-16 Identities = 40/69 (57%), Positives = 46/69 (66%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 LEAVLKE VDLEN+P+EEV ++LRCSREGLT E A +RL +FG N Sbjct: 8 LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLG 67 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 68 FMWNPLSWV 76
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump| 4) Length = 960 Score = 83.2 bits (204), Expect = 3e-16 Identities = 39/69 (56%), Positives = 46/69 (66%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 LEAVLKE VDLEN+P+EEV +NLRCS+EGLT + A +RL +FG N Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 72 FMWNPLSWV 80
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump| 2) Length = 947 Score = 77.0 bits (188), Expect = 2e-14 Identities = 35/70 (50%), Positives = 43/70 (61%) Frame = +2 Query: 239 NLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXX 418 +LE + E VDLE IP+EEV L+CSREGLT ++ + R+QIFGPN Sbjct: 2 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 61 Query: 419 XXMWNPLSWV 448 MWNPLSWV Sbjct: 62 GFMWNPLSWV 71
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 77.0 bits (188), Expect = 2e-14 Identities = 36/73 (49%), Positives = 46/73 (63%) Frame = +2 Query: 230 EAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXX 409 +A +LE + E VDLE IP+EEV + L+C+REGL+A++ RLQIFGPN Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62 Query: 410 XXXXXMWNPLSWV 448 MWNPLSWV Sbjct: 63 KFLGFMWNPLSWV 75
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump| 3) Length = 948 Score = 76.3 bits (186), Expect = 3e-14 Identities = 36/72 (50%), Positives = 43/72 (59%) Frame = +2 Query: 233 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXX 412 A LE ++ E VDLE IP+EEV L+CSREGL+ + + RLQIFGPN Sbjct: 1 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 60 Query: 413 XXXXMWNPLSWV 448 MWNPLSWV Sbjct: 61 FLGFMWNPLSWV 72
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 75.9 bits (185), Expect = 4e-14 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = +2 Query: 236 GNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXX 415 G LE + E VDLENIP+EEV + L+C+R+GLT+++ QR++IFG N Sbjct: 2 GGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKF 61 Query: 416 XXXMWNPLSWV 448 MWNPLSWV Sbjct: 62 LGFMWNPLSWV 72
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump| 9) Length = 954 Score = 74.7 bits (182), Expect = 1e-13 Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = +2 Query: 233 AGNLEA----VLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXX 400 AGN ++ + E +DLE IP+EEVL LRC+REGLT+++ Q RL+IFGPN Sbjct: 2 AGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKEN 61 Query: 401 XXXXXXXXMWNPLSWV 448 MWNPLSWV Sbjct: 62 KVLKFLGFMWNPLSWV 77
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump| 1) Length = 948 Score = 72.8 bits (177), Expect = 4e-13 Identities = 33/69 (47%), Positives = 41/69 (59%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 LE + E VDLE IP+EEV L+C+REGLT ++ + R+ IFGPN Sbjct: 3 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 62 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 63 FMWNPLSWV 71
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump| 7) Length = 961 Score = 71.2 bits (173), Expect = 1e-12 Identities = 31/69 (44%), Positives = 44/69 (63%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 L+A+ E +DLEN+P+EEV +L+C++EGLT+ + Q+RL +FG N Sbjct: 7 LKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFLG 66 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 67 FMWNPLSWV 75
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump| 6) Length = 949 Score = 70.5 bits (171), Expect = 2e-12 Identities = 33/68 (48%), Positives = 42/68 (61%) Frame = +2 Query: 245 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 424 + + KE VDLE IP++EV L+CSREGL++E+ + RLQIFG N Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67 Query: 425 MWNPLSWV 448 MWNPLSWV Sbjct: 68 MWNPLSWV 75
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump| 5) Length = 948 Score = 69.3 bits (168), Expect = 4e-12 Identities = 31/69 (44%), Positives = 41/69 (59%) Frame = +2 Query: 242 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 421 L+ + E VDL IP+EEV + L+C+++GLTA +A RL +FGPN Sbjct: 3 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 62 Query: 422 XMWNPLSWV 448 MWNPLSWV Sbjct: 63 FMWNPLSWV 71
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump| 8) Length = 948 Score = 68.9 bits (167), Expect = 5e-12 Identities = 31/68 (45%), Positives = 43/68 (63%) Frame = +2 Query: 245 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 424 + + KE VDLE IP+EEV + L+CS+EGL++++ +RL+IFG N Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67 Query: 425 MWNPLSWV 448 MWNPLSWV Sbjct: 68 MWNPLSWV 75
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 58.2 bits (139), Expect = 9e-09 Identities = 30/75 (40%), Positives = 42/75 (56%) Frame = +2 Query: 224 DKEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXX 403 DK + + ++ +DL +PLEEV + LR S +GL + A++RL+IFGPN Sbjct: 6 DKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENR 65 Query: 404 XXXXXXXMWNPLSWV 448 MWNPLSWV Sbjct: 66 FVKFLGFMWNPLSWV 80
>PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like| Length = 813 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +2 Query: 269 DLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN-XXXXXXXXXXXXXXXXMWNPLSW 445 DLE IP+EEV LRCSREGL+ + ++RL+IFGPN M+ PLSW Sbjct: 17 DLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSW 76 Query: 446 V 448 V Sbjct: 77 V 77
>PMA1_DICDI (P54679) Probable plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (PAT2) Length = 1058 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = +2 Query: 284 PLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSW 445 PL+ +L+ L+ + GLT +AQ+RL+ GPN MWNPLSW Sbjct: 169 PLDNILEELKANANGLTKAEAQKRLEEVGPNAIPDVKRYPILEFLYFMWNPLSW 222
>PMA1_DUNAC (P54210) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1103 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/73 (35%), Positives = 34/73 (46%) Frame = +2 Query: 227 KEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXX 406 K A N + + EV D I LE+ L CS GL+ +A+ RL+ GPN Sbjct: 23 KSADNGDKGVDEV-DFAKIGLEDAFKYLNCSEHGLSGAEAEARLKQHGPNKLPDNSRNPV 81 Query: 407 XXXXXXMWNPLSW 445 MWNPL+W Sbjct: 82 LVYFGYMWNPLAW 94
>PMA1_DUNBI (P54211) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1131 Score = 45.4 bits (106), Expect = 6e-05 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = +2 Query: 266 VDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSW 445 VD I L++ L C++ GL++ +A RLQ GPN MWNPL+W Sbjct: 32 VDFAKITLDDAFKYLNCNKHGLSSAEAAARLQQHGPNKLPDSSRNPVLVFLGYMWNPLAW 91
>AT1A_ARTSF (P17326) Sodium/potassium-transporting ATPase alpha chain (EC| 3.6.3.9) (Sodium pump) (Na+/K+ ATPase) Length = 996 Score = 34.7 bits (78), Expect = 0.11 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +2 Query: 227 KEAGNLEAVLKEV-VDLENIPLEEVLDNLRCSRE-GLTAEQAQQRLQIFGPN 376 K+ L + KE+ +D IPLEE+ L + E GLT+ QA+ L+ +GPN Sbjct: 4 KQGKQLSDLKKELELDQHKIPLEELCRRLGTNTETGLTSSQAKSHLEKYGPN 55
>ATCL_SYNP7 (P37278) Cation-transporting ATPase pacL (EC 3.6.3.-)| Length = 926 Score = 34.3 bits (77), Expect = 0.14 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +2 Query: 233 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN 376 + +L V + + ++ +EE L R GLTAE A RL ++GPN Sbjct: 7 SASLTDVRQPIAHWHSLTVEECHQQLDAHRNGLTAEVAADRLALYGPN 54
>ATMB_SALTY (P22036) Magnesium-transporting ATPase, P-type 1 (EC 3.6.3.2)| (Mg(2+) transport ATPase, P-type 1) Length = 908 Score = 33.1 bits (74), Expect = 0.32 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +2 Query: 290 EEVLDNLRCSREGLTAEQAQQRLQIFGPN 376 EE L L R+GLT E+A +RL+++G N Sbjct: 37 EETLARLNSHRQGLTIEEASERLKVYGRN 65
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 32.0 bits (71), Expect = 0.71 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +2 Query: 59 PHPKNSIPSAEAKKIQPEPEGLLTSGRPARGTAHPPGRGR 178 P P P A + P P G+ GRPAR A PG GR Sbjct: 202 PRPGAPRPGASPGNMPPRPGGVGGPGRPARPGAPRPGGGR 241
>Y250_ARCFU (O29989) Hypothetical protein AF0250| Length = 110 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +2 Query: 230 EAGNLEAVLKEVVDLENIPLEEVLDNLR 313 E GNLE V + +EN+P+EEV+ LR Sbjct: 82 EKGNLEEVFELAEKIENMPIEEVVKMLR 109
>THIE_CHLCV (Q824E9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 212 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +2 Query: 263 VVDLENIPLEEVLDNL-RCSREGLTAEQAQQR 355 + D +NIP+EE LD + C + G+TA Q +++ Sbjct: 11 ITDRQNIPMEEYLDFVSACVQSGVTAVQLREK 42
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat| protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 28.5 bits (62), Expect = 7.9 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Frame = -2 Query: 165 GGWAVPLAGRPLVSKPSGSGWI---FFASADGMEFLGWGVEWSN*RRRRME 22 G W +P P KP G+GW+ A A E GW RR+ME Sbjct: 954 GSWGIP----PATGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKME 1000
>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) (mTCF-3) Length = 584 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 177 LPLPGGWAVPLAGRPLVSKPSG 112 +P P GW VP G+P+ S P G Sbjct: 241 IPHPLGWLVPQQGQPMYSLPPG 262
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 62 HPKNSIPSAEAKKIQPEPEGLLTSGRPA 145 HPK P+AE K +PEP+ +++G PA Sbjct: 1631 HPKTPEPAAETK--EPEPKAPVSAGLPA 1656
>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 588 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 177 LPLPGGWAVPLAGRPLVSKPSG 112 +P P GW VP G+P+ S P G Sbjct: 244 IPHPLGWLVPQQGQPMYSLPPG 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,683,735 Number of Sequences: 219361 Number of extensions: 507731 Number of successful extensions: 2095 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2041 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2087 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)