ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 agccggctctttctcctccacc 101 |||||||||||||||||||||| Sbjct: 25664901 agccggctctttctcctccacc 25664922
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 agccggctctttctcctccacc 101 |||||||||||||||||||||| Sbjct: 151592 agccggctctttctcctccacc 151613
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 agccggctctttctcctccacc 101 |||||||||||||||||||||| Sbjct: 42649 agccggctctttctcctccacc 42670
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ccgcccggcgcacggcggccggggc 177 ||||||||||| ||||||||||||| Sbjct: 2146699 ccgcccggcgcgcggcggccggggc 2146675
>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains the 3' end of the SNAP25 gene for 25kDa synaptosomal-associated protein, the RPL23AP6 gene for ribosomal protein L23a pseudogene 6, part of a novel gene and a hypoxia induced gene 1 (HIG1) pseudogene, complete sequence Length = 140306 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cttcctctcctccccaccacc 73 ||||||||||||||||||||| Sbjct: 118670 cttcctctcctccccaccacc 118690
>emb|AL671978.2| Mouse DNA sequence from clone RP23-443E19 on chromosome X, complete sequence Length = 56222 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cacttcctctcctccccaccacctc 75 |||||||||||||||||||| |||| Sbjct: 24929 cacttcctctcctccccaccccctc 24953
>gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complete sequence Length = 131908 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ccggcgcacggcggccggggccac 180 |||| ||||||||||||||||||| Sbjct: 130180 ccggggcacggcggccggggccac 130203
>ref|XM_512411.1| PREDICTED: Pan troglodytes transportin 2 (importin 3, karyopherin beta 2b) (LOC455748), mRNA Length = 2960 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1890 ccaccacctcaaccagccgg 1909
>gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, complete sequence Length = 205158 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cccgtccacctccctccctc 46 |||||||||||||||||||| Sbjct: 22538 cccgtccacctccctccctc 22519
>ref|NM_013433.3| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b) (TNPO2), mRNA Length = 4901 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1794 ccaccacctcaaccagccgg 1813
>gb|BC072420.1| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b), mRNA (cDNA clone MGC:90166 IMAGE:6184325), complete cds Length = 4901 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1794 ccaccacctcaaccagccgg 1813
>ref|XM_580736.2| PREDICTED: Bos taurus similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 1 (LOC504589), mRNA Length = 2744 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1692 ccaccacctcaaccagccgg 1711
>ref|XM_866623.1| PREDICTED: Bos taurus similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 2 (LOC504589), mRNA Length = 2832 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1780 ccaccacctcaaccagccgg 1799
>ref|XM_878775.1| PREDICTED: Bos taurus similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 3 (LOC504589), mRNA Length = 1213 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 60 ccaccacctcaaccagccgg 79
>gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome 14, complete sequence Length = 202916 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 35 cctccctccctctccgcacttcctctcctccc 66 |||||||||| |||| | |||||||||||||| Sbjct: 153757 cctccctccccctcccctcttcctctcctccc 153726
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ccccgtccacctccctccct 45 |||||||||||||||||||| Sbjct: 110665 ccccgtccacctccctccct 110646
>ref|XM_862403.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 4 (LOC484930), mRNA Length = 2861 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1810 ccaccacctcaaccagccgg 1829
>ref|XM_542046.2| PREDICTED: Canis familiaris similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 1 (LOC484930), mRNA Length = 2819 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1768 ccaccacctcaaccagccgg 1787
>ref|XM_862384.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 3 (LOC484930), mRNA Length = 2789 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1738 ccaccacctcaaccagccgg 1757
>ref|XM_862372.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 2 (LOC484930), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 60 ccaccacctcaaccagccgg 79
>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete sequence Length = 216834 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 35 cctccctccctctccgcacttcctctcctccc 66 |||||||||| |||| | |||||||||||||| Sbjct: 11674 cctccctccccctcccctcttcctctcctccc 11643
>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence Length = 191540 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ctctcctccccaccacctca 76 |||||||||||||||||||| Sbjct: 106501 ctctcctccccaccacctca 106482
>gb|BC063679.1| Homo sapiens cDNA clone IMAGE:4358892, **** WARNING: chimeric clone **** Length = 1899 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1675 ccaccacctcaaccagccgg 1694
>gb|BC018314.1| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b), mRNA (cDNA clone IMAGE:4154236), containing frame-shift errors Length = 2377 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1712 ccaccacctcaaccagccgg 1731
>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183100 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 acctccctccctctccgcac 53 |||||||||||||||||||| Sbjct: 28416 acctccctccctctccgcac 28397
>emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chromosome 11 Contains a novel gene and a ribosomal protein S20 (Rps20) pseudogene, complete sequence Length = 128168 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gcacttcctctcctccccaccacc 73 ||||| |||||||||||||||||| Sbjct: 56982 gcactccctctcctccccaccacc 57005
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 cctgccccgtttgccgcccggcgc 163 |||||||| ||||||||||||||| Sbjct: 507457 cctgccccatttgccgcccggcgc 507434
>dbj|AK056183.1| Homo sapiens cDNA FLJ31621 fis, clone NT2RI2003205, highly similar to Homo sapiens transportin2 mRNA Length = 2836 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 2347 ccaccacctcaaccagccgg 2366
>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence Length = 167475 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 ctctttctcctccaccgttctcttctcc 113 |||||||||||||||| ||||| ||||| Sbjct: 96357 ctctttctcctccacccttctcctctcc 96330
>gb|AC009549.6| Homo sapiens chromosome 11, clone RP11-359E10, complete sequence Length = 180442 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 acttcctctcctccccacca 71 |||||||||||||||||||| Sbjct: 77417 acttcctctcctccccacca 77398
>ref|XM_684776.1| PREDICTED: Danio rerio similar to Ca2+-dependent secretion activator isoform 2 (LOC561366), mRNA Length = 5064 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gctctttctcctccaccgtt 104 |||||||||||||||||||| Sbjct: 2335 gctctttctcctccaccgtt 2316
>gb|AC018761.6| Homo sapiens chromosome 19 clone CTD-2659N19, complete sequence Length = 147750 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 50933 ccaccacctcaaccagccgg 50914
>emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chromosome 4, complete sequence Length = 110038 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ccgtccacctccctccctct 47 |||||||||||||||||||| Sbjct: 27868 ccgtccacctccctccctct 27849
>gb|AC012169.8|AC012169 Homo sapiens chromosome 15 clone RP11-522G20 map 15q21.2, complete sequence Length = 180722 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cagccggctctttctcctcc 98 |||||||||||||||||||| Sbjct: 85577 cagccggctctttctcctcc 85558
>dbj|AK021359.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730050C22 product:unclassifiable, full insert sequence Length = 1048 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ccgtccacctccctccctct 47 |||||||||||||||||||| Sbjct: 36 ccgtccacctccctccctct 17
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 142114 gctcctgccccgtttgccgc 142133
>dbj|AB210011.1| Homo sapiens mRNA for TNPO2 variant protein, partial cds, clone: fh13310 Length = 4993 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 2388 ccaccacctcaaccagccgg 2407
>dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 28/28, complete sequence Length = 107897 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 27783 cttcctctcctccccaccac 27764
>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence Length = 94576 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ccacctccctccctctccgc 51 |||||||||||||||||||| Sbjct: 80347 ccacctccctccctctccgc 80328
>gb|AC008496.6| Homo sapiens chromosome 5 clone CTC-431G16, complete sequence Length = 135434 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aatttgggcaaccacccgac 25 |||||||||||||||||||| Sbjct: 28344 aatttgggcaaccacccgac 28363
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 7010 gctcctgccccgtttgccgc 7029
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1460A05 Length = 143371 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 142114 gctcctgccccgtttgccgc 142133
>dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, map 22, complete sequences Length = 189269 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 150992 cttcctctcctccccaccac 150973
>dbj|AK121897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105E24, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 798 gctcctgccccgtttgccgc 817
>dbj|AK109515.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D06, full insert sequence Length = 1473 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 800 gctcctgccccgtttgccgc 819
>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 69654 cttcctctcctccccaccac 69635
>dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-140K16, complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 154243 cttcctctcctccccaccac 154224
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gctcctgccccgtttgccgc 156 |||||||||||||||||||| Sbjct: 78428 gctcctgccccgtttgccgc 78409
>emb|AL935208.8| Zebrafish DNA sequence from clone CH211-241N17, complete sequence Length = 151406 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gctctttctcctccaccgtt 104 |||||||||||||||||||| Sbjct: 64253 gctctttctcctccaccgtt 64234
>gb|AY998846.1| Lates calcarifer clone Lca52 microsatellite sequence Length = 705 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cccgtccacctccctccctc 46 |||||||||||||||||||| Sbjct: 219 cccgtccacctccctccctc 200
>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence Length = 177014 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 154014 cttcctctcctccccaccac 154033
>gb|AF019039.1|AF019039 Homo sapiens transportin2 mRNA, complete cds Length = 2926 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1771 ccaccacctcaaccagccgg 1790
>gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosome 16, complete sequence Length = 181574 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 35 cctccctccctctccgcacttcctctcctccc 66 ||||||| ||||||| | |||||||||||||| Sbjct: 17097 cctcccttcctctcctcccttcctctcctccc 17066
>gb|AF007748.1|AF007748 Homo sapiens karyopherin beta2b homolog mRNA, complete cds Length = 3027 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccaccacctcaaccagccgg 85 |||||||||||||||||||| Sbjct: 1941 ccaccacctcaaccagccgg 1960
>gb|AY919613.1| Rhodothermus marinus heme-copper oxygen reductase (coxA3) gene, partial cds Length = 1683 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggcgcacggcggccggggcc 178 |||||||||||||||||||| Sbjct: 984 ggcgcacggcggccggggcc 1003
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 ctccctccctctccgcacttcctctcct 63 |||||||||||||| |||||||||||| Sbjct: 121343 ctccctccctctcctgacttcctctcct 121370
>dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 8/9, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cttcctctcctccccaccac 72 |||||||||||||||||||| Sbjct: 18413 cttcctctcctccccaccac 18394
>dbj|AB065967.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_530 Length = 28315 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ccacctccctccctctccgc 51 |||||||||||||||||||| Sbjct: 6154 ccacctccctccctctccgc 6173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,193,076 Number of Sequences: 3902068 Number of extensions: 3193076 Number of successful extensions: 113518 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113275 Number of HSP's gapped (non-prelim): 242 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
