ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 178 1e-41
3gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 178 1e-41
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, ... 143 6e-31
6ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
7dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
9dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
11dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
13emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 60 7e-06
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
16emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 52 0.002
17emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 52 0.002
18ref|NM_120729.2| Arabidopsis thaliana ATUBA2; ubiquitin activati... 50 0.007
19dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.007
20gb|U40566.1|ATU40566 Arabidopsis thaliana ubiquitin activating e... 50 0.007
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.10
22gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 44 0.41
23gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 44 0.41
24gb|AC144384.4| Pan troglodytes BAC clone CH251-456K17 from X, co... 42 1.6
25gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 42 1.6
26gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nippon... 42 1.6
27dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 42 1.6
29gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28... 42 1.6
30gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
32gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, compl... 40 6.4
33ref|XM_468091.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
34ref|XM_591672.2| PREDICTED: Bos taurus similar to sarcalumenin (... 40 6.4
35gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.4
36gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 6.4
37emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on ch... 40 6.4
38gb|AC016255.24| Homo sapiens 3 BAC RP11-883M5 (Roswell Park Canc... 40 6.4
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
41dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
42dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
43dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
44dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
45gb|AY108693.1| Zea mays PCO078930 mRNA sequence 40 6.4
46gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp... 40 6.4
47emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on ch... 40 6.4
48gb|U46014.1|SSU46014 Saccharum sp. polyphenol oxidase mRNA, comp... 40 6.4 
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full
           insert sequence
          Length = 3682

 Score =  244 bits (123), Expect = 2e-61
 Identities = 196/219 (89%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 250 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 363 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 422

                                                                       
Query: 310 gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
           |||||||| |||||| ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 423 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 482

                                                                       
Query: 370 gacagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaa 429
           ||  || |||||||||||| | ||||||||||| ||| |||||||||||||| | | |||
Sbjct: 483 gattgcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaa 542

                                                  
Query: 430 tgtggatatgtgggacctctctggc-atttcttcctatc 467
           |||||| ||||||||| | || ||| |||||||||||||
Sbjct: 543 tgtggaaatgtgggacttatcaggcaatttcttcctatc 581



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Plus

                                                                       
Query: 96  cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 149
           ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 197 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 256

                                                        
Query: 150 cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 194
           || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 257 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 301
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                            
Query: 250      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10276954 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 10276895

                                                                            
Query: 310      gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
                |||||||| |||||| ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 10276894 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 10276835

                  
Query: 370      ga 371
                ||
Sbjct: 10276834 ga 10276833



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                            
Query: 96       cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 149
                ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 10277120 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 10277061

                                                             
Query: 150      cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 194
                || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 10277060 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 10277016



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                            
Query: 371      acagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaat 430
                ||||| |||||||||||| | ||||||||||| ||| |||||||||||||| | | ||||
Sbjct: 10275732 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 10275673

                                                      
Query: 431      gtggatatgtgggacctctctggc-atttcttcctatc 467
                ||||| ||||||||| | || ||| |||||||||||||
Sbjct: 10275672 gtggaaatgtgggacttatcaggcaatttcttcctatc 10275635
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                          
Query: 250    ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
              ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 138367 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 138308

                                                                          
Query: 310    gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
              |||||||| |||||| ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 138307 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 138248

                
Query: 370    ga 371
              ||
Sbjct: 138247 ga 138246



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                          
Query: 96     cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 149
              ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 138533 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 138474

                                                           
Query: 150    cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 194
              || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 138473 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 138429



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                          
Query: 371    acagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaat 430
              ||||| |||||||||||| | ||||||||||| ||| |||||||||||||| | | ||||
Sbjct: 137145 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 137086

                                                    
Query: 431    gtggatatgtgggacctctctggc-atttcttcctatc 467
              ||||| ||||||||| | || ||| |||||||||||||
Sbjct: 137085 gtggaaatgtgggacttatcaggcaatttcttcctatc 137048
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                            
Query: 250      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10275055 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 10274996

                                                                            
Query: 310      gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
                |||||||| |||||| ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 10274995 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 10274936

                  
Query: 370      ga 371
                ||
Sbjct: 10274935 ga 10274934



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                            
Query: 96       cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 149
                ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 10275221 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 10275162

                                                             
Query: 150      cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 194
                || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 10275161 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 10275117



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                            
Query: 371      acagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaat 430
                ||||| |||||||||||| | ||||||||||| ||| |||||||||||||| | | ||||
Sbjct: 10273833 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 10273774

                                                      
Query: 431      gtggatatgtgggacctctctggc-atttcttcctatc 467
                ||||| ||||||||| | || ||| |||||||||||||
Sbjct: 10273773 gtggaaatgtgggacttatcaggcaatttcttcctatc 10273736
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>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3588

 Score =  143 bits (72), Expect = 6e-31
 Identities = 168/200 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcg 315
           ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 376

                                                                       
Query: 316 gctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctgagacagc 375
            |  ||||| || ||| |||| |||||||||||  | ||||||||||| || || |  ||
Sbjct: 377 ccgcctcttcgcctccgacgtcctcgtctccgggctcaacgggcttggcgccgaaattgc 436

                                                                       
Query: 376 aaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaatgtgga 435
           |||||||||||| || || || || || ||||||||  ||||||||||| ||| |||| |
Sbjct: 437 aaagaatcttgcccttgctggagtcaagtctgtcactatacatgatgtaaaaactgtgaa 496

                               
Query: 436 tatgtgggacctctctggca 455
            ||||||||| | |||||||
Sbjct: 497 gatgtgggacttgtctggca 516
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>ref|NM_185567.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3522

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 158/195 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
           |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 324 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 383

                                                                       
Query: 310 gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
            ||||| |  ||||| || ||| | || |||||||| ||| | || || || || || ||
Sbjct: 384 catgcgccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcaga 443

                                                                       
Query: 370 gacagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaa 429
           ||  || ||||| |||||||| || || || || || |||||||||||||||||  ||||
Sbjct: 444 gattgccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaa 503

                          
Query: 430 tgtggatatgtggga 444
            || || ||||||||
Sbjct: 504 cgttgagatgtggga 518
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>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full
           insert sequence
          Length = 3522

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 158/195 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
           |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 324 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 383

                                                                       
Query: 310 gatgcggctgctctttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 369
            ||||| |  ||||| || ||| | || |||||||| ||| | || || || || || ||
Sbjct: 384 catgcgccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcaga 443

                                                                       
Query: 370 gacagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaa 429
           ||  || ||||| |||||||| || || || || || |||||||||||||||||  ||||
Sbjct: 444 gattgccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaa 503

                          
Query: 430 tgtggatatgtggga 444
            || || ||||||||
Sbjct: 504 cgttgagatgtggga 518
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 250      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
                |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 29425626 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 29425685

                      
Query: 310      gatgcg 315
                 |||||
Sbjct: 29425686 catgcg 29425691



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                            
Query: 372      cagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaatg 431
                |||| ||||| |||||||| || || || || || |||||||||||||||||  |||| |
Sbjct: 29426015 cagccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaacg 29426074

                             
Query: 432      tggatatgtggga 444
                | || ||||||||
Sbjct: 29426075 ttgagatgtggga 29426087
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 250   ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 309
             |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 88548 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 88607

                   
Query: 310   gatgcg 315
              |||||
Sbjct: 88608 catgcg 88613



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                         
Query: 372   cagcaaagaatcttgctctggcgggtgttaaatctgtcaccctacatgatgtagaaaatg 431
             |||| ||||| |||||||| || || || || || |||||||||||||||||  |||| |
Sbjct: 88937 cagccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaacg 88996

                          
Query: 432   tggatatgtggga 444
             | || ||||||||
Sbjct: 88997 ttgagatgtggga 89009
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 257    gagatcgatgaggaccttcacagcaggcagctcgccgt 294
              |||||||||||||||||||||||| | |||||||||||
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgt 317100
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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 257 gagatcgatgaggaccttcacagcaggcagctcgccgt 294
           |||||||||||||||||||||||| | |||||||||||
Sbjct: 438 gagatcgatgaggaccttcacagccgccagctcgccgt 475
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 257    gagatcgatgaggaccttcacagcaggcagctcgccgt 294
              |||||||||||||||||||||||| | |||||||||||
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgt 317100
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 257   gagatcgatgaggaccttcacagcaggcagctcgccgt 294
             |||||||||||||||||||||||| | |||||||||||
Sbjct: 50188 gagatcgatgaggaccttcacagccgccagctcgccgt 50151
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 257    gagatcgatgaggaccttcacagcaggcagctcgccgt 294
              ||||||||||||||||| |||||| | |||||||||||
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgt 300135
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 257    gagatcgatgaggaccttcacagcaggcagctcgccgt 294
              ||||||||||||||||| |||||| | |||||||||||
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgt 300135
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 257  gagatcgatgaggaccttcacagcaggcagctcgccgt 294
            ||||||||||||||||| |||||| | |||||||||||
Sbjct: 4821 gagatcgatgaggacctccacagccgccagctcgccgt 4858
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 257  gagatcgatgaggaccttcacagcaggcagctcgccgt 294
            ||||||||||||||||| |||||| | |||||||||||
Sbjct: 7490 gagatcgatgaggacctccacagccgccagctcgccgt 7453
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>ref|NM_120729.2| Arabidopsis thaliana ATUBA2; ubiquitin activating enzyme AT5G06460
           (ATUBA2) mRNA, complete cds
          Length = 3379

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 256 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgg 300
           |||||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 204 ggagatcgatgaagatcttcatagcagacagctcgccgtttacgg 248
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>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15
          Length = 83865

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 256   ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgg 300
             |||||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 78910 ggagatcgatgaagatcttcatagcagacagctcgccgtttacgg 78954
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>gb|U40566.1|ATU40566 Arabidopsis thaliana ubiquitin activating enzyme 2 (UBA2) gene,
           complete cds
          Length = 4000

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 256 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgg 300
           |||||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 617 ggagatcgatgaagatcttcatagcagacagctcgccgtttacgg 661
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 137     gacagcggcgacgcggcggcgaa 159
               |||||||||||||||||||||||
Sbjct: 4134804 gacagcggcgacgcggcggcgaa 4134782
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>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 257 gagatcgatgaggaccttcacagcaggcagctcgccgt 294
           |||||||| |||||||| |||||| | |||||||||||
Sbjct: 306 gagatcgacgaggacctgcacagccgccagctcgccgt 343
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>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 257 gagatcgatgaggaccttcacagcaggcagctcgccgt 294
           |||||||| |||||||| |||||| | |||||||||||
Sbjct: 401 gagatcgacgaggacctgcacagccgccagctcgccgt 438
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>gb|AC144384.4| Pan troglodytes BAC clone CH251-456K17 from X, complete sequence
          Length = 220712

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 446    ctctctggcatttcttcctat 466
              |||||||||||||||||||||
Sbjct: 217864 ctctctggcatttcttcctat 217884



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 446    ctctctggcatttcttcctat 466
              |||||||||||||||||||||
Sbjct: 131893 ctctctggcatttcttcctat 131873
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>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   ctctctggcatttcttcctat 466
             |||||||||||||||||||||
Sbjct: 66546 ctctctggcatttcttcctat 66566
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>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0089D15, from Chromosome 10, complete sequence
          Length = 164679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   gatgtagaaaatgtggatatg 439
             |||||||||||||||||||||
Sbjct: 55289 gatgtagaaaatgtggatatg 55269
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 419     gatgtagaaaatgtggatatg 439
               |||||||||||||||||||||
Sbjct: 4058460 gatgtagaaaatgtggatatg 4058440
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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   ctctctggcatttcttcctat 466
             |||||||||||||||||||||
Sbjct: 67579 ctctctggcatttcttcctat 67599
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>gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 245179

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 446    ctctctggcatttcttcctat 466
              |||||||||||||||||||||
Sbjct: 241823 ctctctggcatttcttcctat 241843



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 446    ctctctggcatttcttcctat 466
              |||||||||||||||||||||
Sbjct: 152559 ctctctggcatttcttcctat 152539
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>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05,
            complete sequence
          Length = 171022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 419  gatgtagaaaatgtggatatg 439
            |||||||||||||||||||||
Sbjct: 6394 gatgtagaaaatgtggatatg 6414
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 419     gatgtagaaaatgtggatatg 439
               |||||||||||||||||||||
Sbjct: 4059281 gatgtagaaaatgtggatatg 4059261
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>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence
          Length = 40909

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   cggcgacgcggcggcgaagaaggc 165
             ||||||||||||||| ||||||||
Sbjct: 16297 cggcgacgcggcggcaaagaaggc 16320
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>ref|XM_468091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 cggcgacgcggcggcgaaga 161
           ||||||||||||||||||||
Sbjct: 130 cggcgacgcggcggcgaaga 111
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>ref|XM_591672.2| PREDICTED: Bos taurus similar to sarcalumenin (LOC513912), mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gaggacagcggcgacgcggc 153
           ||||||||||||||||||||
Sbjct: 526 gaggacagcggcgacgcggc 545
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     gcgacgcggcggcgaagaag 163
               ||||||||||||||||||||
Sbjct: 3679281 gcgacgcggcggcgaagaag 3679262
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     atgtagaaaatgtggatatg 439
               ||||||||||||||||||||
Sbjct: 2308801 atgtagaaaatgtggatatg 2308782
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>emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on chromosome 1q24.1-24.3
            Contains the LHX4 gene for LIM homeobox 4, a novel gene
            (FLJ38931), the 3' end of the ACBD6 gene for
            acyl-Coenzyme A binding domain containing 6 and a CpG
            island, complete sequence
          Length = 113808

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   gcccgcaccgggggccgcgc 100
            ||||||||||||||||||||
Sbjct: 9164 gcccgcaccgggggccgcgc 9145
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>gb|AC016255.24| Homo sapiens 3 BAC RP11-883M5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 84112

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   ctgagacagcaaagaatctt 385
             ||||||||||||||||||||
Sbjct: 39021 ctgagacagcaaagaatctt 39040
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      acagcggcgacgcggcggcg 157
                ||||||||||||||||||||
Sbjct: 15610155 acagcggcgacgcggcggcg 15610136



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      acagcggcgacgcggcggcg 157
                ||||||||||||||||||||
Sbjct: 15610120 acagcggcgacgcggcggcg 15610101
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      cggcgacgcggcggcgaaga 161
                ||||||||||||||||||||
Sbjct: 33006210 cggcgacgcggcggcgaaga 33006229
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   cggcgacgcggcggcgaaga 161
             ||||||||||||||||||||
Sbjct: 52150 cggcgacgcggcggcgaaga 52169
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>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0633D04
          Length = 159636

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acagcggcgacgcggcggcg 157
             ||||||||||||||||||||
Sbjct: 99488 acagcggcgacgcggcggcg 99469



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acagcggcgacgcggcggcg 157
             ||||||||||||||||||||
Sbjct: 99453 acagcggcgacgcggcggcg 99434
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>dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C22, full
           insert sequence
          Length = 2653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 cggcgacgcggcggcgaaga 161
           ||||||||||||||||||||
Sbjct: 130 cggcgacgcggcggcgaaga 111
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>dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F01, full
           insert sequence
          Length = 2648

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 cggcgacgcggcggcgaaga 161
           ||||||||||||||||||||
Sbjct: 33  cggcgacgcggcggcgaaga 14
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>gb|AY108693.1| Zea mays PCO078930 mRNA sequence
          Length = 735

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 gcggcgacgcggcggcgaag 160
           ||||||||||||||||||||
Sbjct: 301 gcggcgacgcggcggcgaag 320
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>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    tgccggggagacggttggcggggg 234
              |||||||||||||| |||||||||
Sbjct: 126863 tgccggggagacgggtggcggggg 126886
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>emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on chromosome X, complete
            sequence
          Length = 170192

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gacagcaaagaatcttgctc 389
            ||||||||||||||||||||
Sbjct: 5588 gacagcaaagaatcttgctc 5569
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>gb|U46014.1|SSU46014 Saccharum sp. polyphenol oxidase mRNA, complete cds
          Length = 2209

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 135  aggacagcggcgacgcggcggcga 158
            |||||||||||| |||||||||||
Sbjct: 1468 aggacagcggcggcgcggcggcga 1491


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,120,798
Number of Sequences: 3902068
Number of extensions: 3120798
Number of successful extensions: 61125
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60471
Number of HSP's gapped (non-prelim): 652
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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