ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08e09 |
|---|---|
| Clone Library Name | barley_pub |
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 35.0 bits (79), Expect = 0.086 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 17/115 (14%) Frame = -1 Query: 438 LLAPAQVSAPAALTR--REELPSASRATPSESPCAYHMMV--------------LPAGPA 307 ++AP PA L R P AS P+E P LPAG A Sbjct: 2250 MIAPRVPLGPAGLYRYPAPRFPIASSVPPAEGPVYLGKPAATKASGAGGPPRPELPAGVA 2309 Query: 306 REETLATQTAKRYLRGDEPSVATKPAAMPRLGETRTRLASVGS-QGLVSLPAGKE 145 REE +T TA ++ + A PA P G+ A+ GS G++S PA ++ Sbjct: 2310 REEPFST-TAPAVIKEAPVAPAPGPAPAPPPGQKPAGEAAAGSGSGVLSRPASEK 2363
>NCA11_MOUSE (P13595) Neural cell adhesion molecule 1, 180 kDa isoform precursor| (N-CAM 180) (NCAM-180) Length = 1115 Score = 31.6 bits (70), Expect = 0.95 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Frame = -1 Query: 417 SAPAALTRREELPSASRATPSESPC---AYHMMVLPAGPAREETLATQTAKRYLRGDEPS 247 S PA+ + P AS+A+P+ +P A + A PA + A Q A +G +P Sbjct: 928 STPASAGETSKAPPASKASPAPTPTPAGAASPLAAVAAPATDAPQAKQEAPS-TKGPDPE 986 Query: 246 VATKPAAMPRLGETRTRLASVGSQGLVSLPAGKE 145 T+P + E T AS S+ + P+ E Sbjct: 987 -PTQPGTVKNPPEAATAPASPKSKAATTNPSQGE 1019
>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1) Length = 814 Score = 31.6 bits (70), Expect = 0.95 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = -1 Query: 420 VSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYL----RGDE 253 V+ P A R E + P+ P ++ PAGP E T+ + + G E Sbjct: 7 VAVPEAAEERAE---PGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPE 63 Query: 252 PSVATKPAA 226 P V T+PAA Sbjct: 64 PEVRTEPAA 72
>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12| (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 kDa component) (ARC240) (CAG repeat protein 45) (OPA-containin Length = 2212 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = -1 Query: 348 PCAYHMMVLPAGPAREETLATQTAKRYLRGDEPSVATKPAAMPRLGETRTRLASVGSQGL 169 P AY++ LP P EE A + + EP KP A P E R + ++ G + Sbjct: 1769 PRAYYLEPLPLPPEDEEPPAPTLLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKR- 1827 Query: 168 VSLPAGK 148 S PA K Sbjct: 1828 -SQPATK 1833
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/71 (30%), Positives = 28/71 (39%) Frame = -1 Query: 387 ELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDEPSVATKPAAMPRLGE 208 ELP + P S A P P REETL A + +PS A P +G Sbjct: 92 ELPGLPLSIPQPSVPAVVPQSAPPEPHREETLTATVASQV--SQQPSAAASPGEQAVVGS 149 Query: 207 TRTRLASVGSQ 175 T + S S+ Sbjct: 150 ATTTVPSSTSK 160
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.4 bits (67), Expect = 2.1 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = -1 Query: 444 LVLLAPAQVSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYL 265 + L A A P + T R +LP A P A V+ GP + L T + + Sbjct: 2449 MTLQALALQQQPLSATSRPQLPERPLA-----PEARPKTVVGTGPPAKPVLVRPTPQSWA 2503 Query: 264 RGD---EPSVATKPAAMPRLGETRTRLASVGS 178 G P + +KP A+P L + T S+ + Sbjct: 2504 PGSVAKAPKIPSKPVAVPILAQDWTAPESISA 2535
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 30.0 bits (66), Expect = 2.8 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 1/79 (1%) Frame = -1 Query: 387 ELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDEPSVATKPAAMPRLGE 208 ELP + P S A P P REETL A + +PS A P +G Sbjct: 92 ELPGLPLSIPQPSVPAVVPQSAPPEPHREETLTATVASQV--SQQPSAAASPGEQAVVGS 149 Query: 207 -TRTRLASVGSQGLVSLPA 154 T T +S VS P+ Sbjct: 150 ATATVPSSTSKDRPVSQPS 168
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 30.0 bits (66), Expect = 2.8 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Frame = -1 Query: 432 APAQVSAPAALTRREELPSASRATPSESP-----CAYHMMVLPAGPAREETLATQTAKRY 268 APA+ +APAA +AS A P +P P PA+ A +A + Sbjct: 85 APAKPAAPAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAPAAPSAAKS 144 Query: 267 LRGDEPSVATKPA 229 +P+ A KPA Sbjct: 145 GSAPKPAAAAKPA 157
>IF2_NITWN (Q3SWP9) Translation initiation factor IF-2| Length = 871 Score = 29.6 bits (65), Expect = 3.6 Identities = 24/83 (28%), Positives = 32/83 (38%) Frame = -1 Query: 432 APAQVSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDE 253 APA+ + P+A A S+ A ++ P GPAR Sbjct: 184 APAKTTTTTTRAAPPARPAAVAADGSDEDEAPRLVRRPGGPAR----------------- 226 Query: 252 PSVATKPAAMPRLGETRTRLASV 184 P +A KPAA P + R RL V Sbjct: 227 PVIAPKPAAKPAPAKQRGRLTLV 249
>GCDC_ACIFE (Q9ZAA7) Glutaconyl-CoA decarboxylase gamma subunit (EC 4.1.1.70)| (Biotin carrier) Length = 145 Score = 29.6 bits (65), Expect = 3.6 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 2/97 (2%) Frame = -1 Query: 441 VLLAPAQVSAPAALTRREELPSASRATPSESPCAYHMMV-LPAG-PAREETLATQTAKRY 268 V APA +APAA + +A A P+ +P A PA PA + T Sbjct: 24 VTAAPAAPAAPAAAPAAAPVAAAPAAAPAPAPAAAPAAAPAPAAKPAAAAPAGSVTVSAP 83 Query: 267 LRGDEPSVATKPAAMPRLGETRTRLASVGSQGLVSLP 157 + G SV KP G+ L ++ Q + P Sbjct: 84 MPGKILSVNVKPGDKVEAGDVLLILEAMKMQNEIMAP 120
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 29.6 bits (65), Expect = 3.6 Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Frame = -1 Query: 438 LLAPAQVSAPAALTRR---EELPSASRATPSESPCAYHMMV--------------LPAGP 310 ++AP PA L R P AS P+E P LPAG Sbjct: 2238 MIAPRVPLGPAGLYRYPAPSRFPIASTIPPAEGPVYLGKPAAAKASGAGGPPRPELPAGG 2297 Query: 309 AREETLATQTAKRYLRGDEPSVATKPAAMPRLGETRTRLASVGS-QGLVSLP 157 AREE L+T ++ E VA PA P G+ A+ GS G++ P Sbjct: 2298 AREEPLSTTAPPAVIK--EAPVAQAPAPPP--GQKPAGDAAAGSGSGVLGRP 2345
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 29.6 bits (65), Expect = 3.6 Identities = 23/98 (23%), Positives = 31/98 (31%) Frame = -1 Query: 432 APAQVSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDE 253 APA PA + P +S SP A PAGP + + Sbjct: 497 APAPEMTPAGTETKPAAPKSSAPATEPSPVAPGTESAPAGPGASSSPKSSVLASETSPIA 556 Query: 252 PSVATKPAAMPRLGETRTRLASVGSQGLVSLPAGKEVI 139 P T PA GS G +++P V+ Sbjct: 557 PGAETAPA---------------GSSGAITIPESSAVV 579
>NRAM_IAHO3 (Q9W7Y7) Neuraminidase (EC 3.2.1.18)| Length = 450 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +2 Query: 266 KYRFAVWVANVSSRAGPAGKTIIWYAHGDSDGVALEADGSSSLLVNAAGALTWAGASST 442 KY VW+ S + +G +IW +G + E D S SL + W+G S + Sbjct: 333 KYGNGVWIGRTKSTSSRSGFEMIWDPNGWT-----ETDSSFSLKQDIIAITDWSGYSGS 386
>AL2S3_RAT (Q8R2H7) Amyotrophic lateral sclerosis 2 chromosomal region candidate| gene 3 protein homolog (Trafficking protein, kinesin-binding 2) (GABA-A receptor-interacting factor 1) (GRIF-1) (O-GlcNAc transferase-interacting protein of 98 kDa) Length = 913 Score = 29.3 bits (64), Expect = 4.7 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Frame = -1 Query: 381 PSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLR---GDEPSVATKPAAMPRLG 211 PS +PS+SPC+ + P E LA++ A+ +L+ G PS A P +G Sbjct: 773 PSTPPNSPSQSPCSSPVPFEPRVHVSENFLASRPAETFLQEMYGLRPS-----RAPPDVG 827 Query: 210 ETR----TRLASVGSQGLVSLPAGKE 145 + + RL +G +V P +E Sbjct: 828 QLKMNLVDRLKRLGIARVVKTPVPRE 853
>BCSB_XANAC (P58933) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) Length = 788 Score = 29.3 bits (64), Expect = 4.7 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -1 Query: 447 ALVLLAP-AQVSAPAALTRREELPSASRA-TPSESPCAYHMMVLPAGPAREETL 292 AL LLA AQ P T + S +A TPS+ P A+ LP G R TL Sbjct: 24 ALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPVAFAAAPLPGGSTRAATL 77
>RPOC_STAAU (P47770) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1140 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>SHAN2_HUMAN (Q9UPX8) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)| Length = 1253 Score = 29.3 bits (64), Expect = 4.7 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 432 APAQVSAPAALTRREELPSA-SRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGD 256 AP+ V +P + + E LP+ S AT S SP + LP+ P + A R R Sbjct: 1111 APSPVVSPTEMNK-ETLPAPLSAATASPSPALSDVFSLPSQPPSGDLFGLNPAGR-SRSP 1168 Query: 255 EPSVATKP 232 PS+ +P Sbjct: 1169 SPSILQQP 1176
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 29.3 bits (64), Expect = 4.7 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Frame = -1 Query: 426 AQVSAPAALTRREELPSASR-ATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDEP 250 A+ +A A + P+A A P+ P A PA + +A TAK + Sbjct: 197 AKPAAKTAAAKPAAKPAAKPVAKPAAKPAAKTAAAKPAAKPAAKPVAKPTAKPAAKTAAA 256 Query: 249 SVATKPAAMPRLGETRTRLASVGSQGLVSLPAGK 148 A KPAA P +A + + PA K Sbjct: 257 KPAAKPAAKPAAKPAAKPVAKSAAAKPAAKPAAK 290
>RPOC_STAAW (P60286) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>RPOC_STAAS (Q6GBU4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>RPOC_STAAR (Q6GJC5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>RPOC_STAAN (P60285) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>RPOC_STAAM (P60284) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>RPOC_STAAC (Q5HID2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1207 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +2 Query: 161 NDTRPWLPTEASRVLVSPSRGMAAGFVATEGS-SPRKY 271 N+TR +L + SR++V + + G V TEGS P+ Y Sbjct: 1001 NETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNY 1038
>FOXJ2_MOUSE (Q9ES18) Forkhead box protein J2 (Fork head homologous X)| Length = 565 Score = 29.3 bits (64), Expect = 4.7 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -1 Query: 432 APAQVSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDE 253 AP++++ ALT + PS ++ P A H L GPA ++TQ + Y R Sbjct: 482 APSRITDSCALTSGKPEPSMNQVNSYGHPQASH---LYPGPAPMYPISTQDSAGYNRPAH 538 Query: 252 PSVATKPAAMPRLGETRT 199 V P P E T Sbjct: 539 HMVPRPPVPPPGANEEIT 556
>YCQ3_YEAST (P25614) Very hypothetical 22.8 kDa protein in PGK1-POL4 intergenic| region Length = 215 Score = 28.9 bits (63), Expect = 6.2 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Frame = -1 Query: 435 LAPAQVSAPAALTRREELPSASRATPSES----PCA-YHMMVLPAGPAREETLA--TQTA 277 LA VS P +T LP+A T S + P A + P GP + LA T A Sbjct: 57 LATVAVSPPPMMT---VLPAAELLTTSSNKALVPAANFSNSKTPGGPFQTMVLAFATVAA 113 Query: 276 KRYLRGDEPSVATKPAAMPRLGETRTRLASVGSQGLVSLPAGK 148 +L S +PA +P L T LAS + GK Sbjct: 114 NNFLDSGPLSNPCQPAGIPSLSVTVLVLASAEKASAMMKSTGK 156
>SYFB_METCA (Q60AY9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 791 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 345 CAYHMMVLPAGPAREETLATQTAKRYLRGDEPSV 244 CA+ L G AR LAT ++ R+ RG +PS+ Sbjct: 335 CAFFAPALIMGKARRYGLATDSSHRFERGVDPSL 368
>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate 80 kDa protein) Length = 308 Score = 28.5 bits (62), Expect = 8.1 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 10/80 (12%) Frame = -1 Query: 429 PAQVSAPAALTRREELPS----------ASRATPSESPCAYHMMVLPAGPAREETLATQT 280 P Q PAA R E PS A AT ++P A AGP +E AT Sbjct: 228 PEQPEQPAAEEPRAEEPSEAVGEKAEEPAPGATADDAPSA-------AGPEQEAPAAT-- 278 Query: 279 AKRYLRGDEPSVATKPAAMP 220 DEP+ + P+A P Sbjct: 279 -------DEPAASAAPSASP 291
>ICEN_XANCT (P18127) Ice nucleation protein| Length = 1567 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/93 (29%), Positives = 39/93 (41%) Frame = -1 Query: 447 ALVLLAPAQVSAPAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRY 268 A V + A+ SAPA LP+ ATPS A P+ + T +TQ+ + Sbjct: 125 AHVHMPAAEPSAPATQATSATLPTP--ATPSTQ----------ATPSTQSTQSTQSTEAT 172 Query: 267 LRGDEPSVATKPAAMPRLGETRTRLASVGSQGL 169 + VAT AA P G+ +A G+ Sbjct: 173 QSTEATPVATVAAAPPPPGQQHDVMAKKTETGV 205
>ECA4_ARATH (Q9XES1) Calcium-transporting ATPase 4, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 1061 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 320 GKTIIWYAHGDSDGVALEADGSSSLLVNAAGALTWAGASS 439 G IIWY H G+ L DG S LV+ + W SS Sbjct: 879 GVFIIWYTHNSFMGIDLSQDGHS--LVSYSQLAHWGQCSS 916
>ECA1_ARATH (P92939) Calcium-transporting ATPase 1, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 1061 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 320 GKTIIWYAHGDSDGVALEADGSSSLLVNAAGALTWAGASS 439 G IIWY H G+ L DG S LV+ + W SS Sbjct: 879 GVFIIWYTHSSFMGIDLSQDGHS--LVSYSQLAHWGQCSS 916
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = -1 Query: 411 PAALTRREELPSASRATPSESPCAYHMMVLPAGPAREETLATQTAKRYLRGDEPSVATKP 232 P LT + +PS PSE P P P E T T+ + +EP + T+ Sbjct: 626 PTILTEKPTIPSEKPTIPSEKPTI--STEKPTVPTEEPTTPTEETTTSM--EEPVIPTEK 681 Query: 231 AAMP 220 ++P Sbjct: 682 PSIP 685 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,971,777 Number of Sequences: 219361 Number of extensions: 484135 Number of successful extensions: 2286 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2285 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
