Clone Name | bastl08e07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_193386.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2676 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||||||||||| || | |||||||||||||||||||| || ||||||||| Sbjct: 31 cggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcacc 90 Query: 205 accggctacctctactactggaatccggagaccaacgtcactcagtacgag 255 ||||||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 91 accggctacctctactactggaacccggagaccaacatcacccagtacgag 141 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 366 ccgctcccgttctcgcacaccgcctcggcgcgaccaccgcgaccgcgaccgg 417 ||||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 240 ccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgg 291
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||||||||||| || | |||||||||||||||||||| || ||||||||| Sbjct: 20518698 cggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcacc 20518757 Query: 205 accggctacctctactactggaatccggagaccaacgtcactcagtacgag 255 ||||||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 20518758 accggctacctctactactggaacccggagaccaacatcacccagtacgag 20518808 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||| || || ||| |||||||||||||| | ||||| | ||||||| | Sbjct: 3717220 cggtacgcgccgccagatccgacgctgcccaagccgtggagggggctcatcgacggcaac 3717161 Query: 205 accggctacctctactactggaatccggagaccaa 239 ||||| |||||||||| |||||| ||||||||||| Sbjct: 3717160 accgggtacctctacttctggaacccggagaccaa 3717126 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 366 ccgctcccgttctcgcacaccgcctcggcgcgaccaccgcgaccgcgaccgg 417 ||||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 20518907 ccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgg 20518958 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 tcgctcccgctcccgctcccgtt 376 ||||||||||||||||||||||| Sbjct: 26964835 tcgctcccgctcccgctcccgtt 26964857 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 |||| ||| |||||||||||||||||||| Sbjct: 29356875 tccccatcccgctcccgctcccgctcccg 29356903 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccggcgccgccgcgacgaac 433 |||||||||||||||||||| Sbjct: 32938500 ccggcgccgccgcgacgaac 32938519 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ccgttcccgatctcgctcccgctcccgctccc 373 |||||||| ||| ||||| ||||||||||||| Sbjct: 26600716 ccgttccctatcccgctctcgctcccgctccc 26600747 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 17947614 cgctcccgctcccgctcccg 17947595
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||||||||||| || | |||||||||||||||||||| || ||||||||| Sbjct: 42520 cggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcacc 42579 Query: 205 accggctacctctactactggaatccggagaccaacgtcactcagtacgag 255 ||||||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 42580 accggctacctctactactggaacccggagaccaacatcacccagtacgag 42630 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 366 ccgctcccgttctcgcacaccgcctcggcgcgaccaccgcgaccgcgaccgg 417 ||||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 42729 ccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgg 42780
>dbj|AK122104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P18, full insert sequence Length = 2776 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||||||||||| || | |||||||||||||||||||| || ||||||||| Sbjct: 143 cggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcacc 202 Query: 205 accggctacctctactactggaatccggagaccaacgtcactcagtacgag 255 ||||||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 203 accggctacctctactactggaacccggagaccaacatcacccagtacgag 253 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 366 ccgctcccgttctcgcacaccgcctcggcgcgaccaccgcgaccgcgaccgg 417 ||||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 352 ccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgg 403
>ref|XM_550287.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2864 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||| || || ||| |||||||||||||| | ||||| | ||||||| | Sbjct: 258 cggtacgcgccgccagatccgacgctgcccaagccgtggagggggctcatcgacggcaac 317 Query: 205 accggctacctctactactggaatccggagaccaa 239 ||||| |||||||||| |||||| ||||||||||| Sbjct: 318 accgggtacctctacttctggaacccggagaccaa 352
>ref|XM_550286.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||| || || ||| |||||||||||||| | ||||| | ||||||| | Sbjct: 43 cggtacgcgccgccagatccgacgctgcccaagccgtggagggggctcatcgacggcaac 102 Query: 205 accggctacctctactactggaatccggagaccaa 239 ||||| |||||||||| |||||| ||||||||||| Sbjct: 103 accgggtacctctacttctggaacccggagaccaa 137
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||| || || ||| |||||||||||||| | ||||| | ||||||| | Sbjct: 125700 cggtacgcgccgccagatccgacgctgcccaagccgtggagggggctcatcgacggcaac 125641 Query: 205 accggctacctctactactggaatccggagaccaa 239 ||||| |||||||||| |||||| ||||||||||| Sbjct: 125640 accgggtacctctacttctggaacccggagaccaa 125606
>dbj|AK100326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L21, full insert sequence Length = 2864 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 145 cggtacgcgccggacgaccctacggtgcccaagccgtggcgcgggctggtggacggcacc 204 |||||||||||| || || ||| |||||||||||||| | ||||| | ||||||| | Sbjct: 258 cggtacgcgccgccagatccgacgctgcccaagccgtggagggggctcatcgacggcaac 317 Query: 205 accggctacctctactactggaatccggagaccaa 239 ||||| |||||||||| |||||| ||||||||||| Sbjct: 318 accgggtacctctacttctggaacccggagaccaa 352
>gb|BC075982.1| Danio rerio zgc:92278, mRNA (cDNA clone MGC:92278 IMAGE:7053397), complete cds Length = 2660 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 855 cgttcccgttctcgctcccgatcccgctcccg 886 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 837 cgatcccgctcccgctctcgttcccgttctcgc 869
>ref|NM_001002610.1| Danio rerio zgc:92278 (zgc:92278), mRNA Length = 2660 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 855 cgttcccgttctcgctcccgatcccgctcccg 886 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 837 cgatcccgctcccgctctcgttcccgttctcgc 869
>ref|XM_695372.1| PREDICTED: Danio rerio similar to Msx2-interacting protein (SPEN homolog) (SMART/HDAC1 associated repressor protein) (LOC571749), mRNA Length = 6816 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 354 tcgctcccgctcccgctcccgttctcgc 381 |||||||||||| ||||||||||||||| Sbjct: 654 tcgctcccgctcacgctcccgttctcgc 627
>ref|XM_703899.1| PREDICTED: Danio rerio similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 7 (LOC561932), mRNA Length = 1390 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 833 cgttcccgttctcgctcccgatcccgctcccg 864 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 815 cgatcccgctcccgctctcgttcccgttctcgc 847
>ref|XM_703898.1| PREDICTED: Danio rerio similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 6 (LOC561932), mRNA Length = 835 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 776 cgttcccgttctcgctcccgatcccgctcccg 807 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 758 cgatcccgctcccgctctcgttcccgttctcgc 790
>ref|XM_703895.1| PREDICTED: Danio rerio similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 3 (LOC561932), mRNA Length = 2641 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 860 cgttcccgttctcgctcccgatcccgctcccg 891 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 842 cgatcccgctcccgctctcgttcccgttctcgc 874
>ref|XM_682819.1| PREDICTED: Danio rerio similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 1 (LOC561932), mRNA Length = 1368 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 811 cgttcccgttctcgctcccgatcccgctcccg 842 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 793 cgatcccgctcccgctctcgttcccgttctcgc 825
>ref|XM_703894.1| PREDICTED: Danio rerio similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 2 (LOC561932), mRNA Length = 1170 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 613 cgttcccgttctcgctcccgatcccgctcccg 644 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 595 cgatcccgctcccgctctcgttcccgttctcgc 627
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20, complete sequence Length = 249759 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccg 374 |||||||| ||||||||||| ||||||||||| Sbjct: 50492 cgttcccgttctcgctcccgatcccgctcccg 50461 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 349 cgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||||||||| || |||||||||||| Sbjct: 50510 cgatcccgctcccgctctcgttcccgttctcgc 50478
>ref|XM_509666.1| PREDICTED: Pan troglodytes LOC452581 (LOC452581), mRNA Length = 4713 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 2582 cgttcccgttctcgctctcgctctctctcccgttctcgc 2544
>ref|NM_184784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 143 ccgatcccgctcccgctcccgctcccg 117
>ref|NM_192485.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 tcgctcccgctcccgctcccgtt 376 ||||||||||||||||||||||| Sbjct: 127 tcgctcccgctcccgctcccgtt 149
>ref|XM_514350.1| PREDICTED: Pan troglodytes similar to arginine-glutamic acid dipeptide (RE) repeats; atrophin 1-like; arginine glutamic acid dipeptide RE repeats (LOC457909), mRNA Length = 2135 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 433 tcccgctctcgctcccgctcccgctcc 407
>ref|XM_361112.1| Magnaporthe grisea 70-15 hypothetical protein (MG03655.4) partial mRNA Length = 2271 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttc 377 ||||||||||||||||||||||| Sbjct: 1805 cgctcccgctcccgctcccgttc 1783
>ref|NM_015070.2| Homo sapiens zinc finger CCCH-type containing 13 (ZC3H13), mRNA Length = 6409 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 2392 cgttcccgttctcgctctcgctctctctcccgttctcgc 2354
>ref|XM_954409.1| Neurospora crassa OR74A hypothetical protein (NCU02243.1) partial mRNA Length = 1656 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 tctcgctcccgctcccgctcccg 374 ||||||||||||||||||||||| Sbjct: 1259 tctcgctcccgctcccgctcccg 1237
>ref|XM_958521.1| Neurospora crassa OR74A hypothetical protein (NCU06773.1) partial mRNA Length = 1389 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 352 tctcgctcccgctcccgctcccg 374 ||||||||||||||||||||||| Sbjct: 601 tctcgctcccgctcccgctcccg 623
>ref|XM_327058.1| Neurospora crassa OR74A hypothetical protein (NCU06773.1) partial mRNA Length = 1389 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 352 tctcgctcccgctcccgctcccg 374 ||||||||||||||||||||||| Sbjct: 601 tctcgctcccgctcccgctcccg 623
>ref|XM_331018.1| Neurospora crassa OR74A hypothetical protein (NCU02243.1) partial mRNA Length = 1656 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 tctcgctcccgctcccgctcccg 374 ||||||||||||||||||||||| Sbjct: 1259 tctcgctcccgctcccgctcccg 1237
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 20457927 ccgatcccgctcccgctcccgctcccg 20457901 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 25786273 cgaccgccgcgaccgcgaccggcgc 25786249
>ref|XM_542572.2| PREDICTED: Canis familiaris similar to Protein KIAA0853 (LOC485453), mRNA Length = 5026 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctccc 373 |||||||| || ||||||||||||||||||| Sbjct: 2373 cgttcccgctcccgctcccgctcccgctccc 2343 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 2367 cgctcccgctcccgctcccg 2348 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctcgc 381 ||||| || ||||||||||||| |||||| |||||| Sbjct: 2364 tcccgctcccgctcccgctccctctcccgctctcgc 2329
>gb|BC062342.1| Homo sapiens arginine-glutamic acid dipeptide (RE) repeats, mRNA (cDNA clone MGC:71168 IMAGE:6379220), complete cds Length = 5497 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 3903 tcccgctctcgctcccgctcccgctcc 3877
>emb|AL445232.5| Human DNA sequence from clone RP11-71J12 on chromosome 13 Contains the 3' end of a novel gene (contains FLJ31860 and KIAA0853), possible ortholog of mouse 3110050K21Rik protein, complete sequence Length = 148103 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 109881 cgttcccgttctcgctctcgctctctctcccgttctcgc 109919
>emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on chromosome 1 Contains the DNB5 gene for deleted in neuroblastoma 5 and the 3' end of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458), complete sequence Length = 122331 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 75622 tcccgctctcgctcccgctcccgctcc 75648
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 352 tctcgctcccgctcccgctcccg 374 ||||||||||||||||||||||| Sbjct: 146693 tctcgctcccgctcccgctcccg 146715
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccgttc 377 ||||||||||||||||||||||| Sbjct: 81831 cgctcccgctcccgctcccgttc 81853
>gb|AY283618.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 6409 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 2392 cgttcccgttctcgctctcgctctctctcccgttctcgc 2354
>emb|AL136745.1|HSM801713 Homo sapiens mRNA; cDNA DKFZp434D1812 (from clone DKFZp434D1812) Length = 5469 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 1430 cgttcccgttctcgctctcgctctctctcccgttctcgc 1392
>dbj|AK092988.1| Homo sapiens cDNA FLJ35669 fis, clone SPLEN2018157 Length = 2609 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 2033 cgttcccgttctcgctctcgctctctctcccgttctcgc 1995
>dbj|AK056422.1| Homo sapiens cDNA FLJ31860 fis, clone NT2RP7001306, weakly similar to U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA Length = 3418 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 2669 cgttcccgttctcgctctcgctctctctcccgttctcgc 2631
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 393 gcgcgaccaccgcgaccgcgacc 415 ||||||||||||||||||||||| Sbjct: 3125573 gcgcgaccaccgcgaccgcgacc 3125551
>ref|NM_012102.2| Homo sapiens arginine-glutamic acid dipeptide (RE) repeats (RERE), mRNA Length = 8035 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 4232 tcccgctctcgctcccgctcccgctcc 4206
>dbj|AB096216.1| Paecilomyces tenuipes genes for DNA lyase, MAT1-1-2, MAT1-1-1, complete cds Length = 10239 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 342 ccgttcccgatctcgctcccgctcccgctcc 372 ||||||||| || |||||||||||||||||| Sbjct: 1458 ccgttcccgttcccgctcccgctcccgctcc 1428
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 20450956 ccgatcccgctcccgctcccgctcccg 20450930 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 25877582 cgaccgccgcgaccgcgaccggcgc 25877558
>dbj|AB007927.2| Homo sapiens mRNA for KIAA0458 protein, partial cds Length = 7341 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 3556 tcccgctctcgctcccgctcccgctcc 3530
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 102227 ccgatcccgctcccgctcccgctcccg 102201
>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445H04 Length = 202821 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 tcgctcccgctcccgctcccgtt 376 ||||||||||||||||||||||| Sbjct: 146480 tcgctcccgctcccgctcccgtt 146502
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 tcgctcccgctcccgctcccgtt 376 ||||||||||||||||||||||| Sbjct: 23666 tcgctcccgctcccgctcccgtt 23688
>gb|AF118275.1|AF118275 Homo sapiens atrophin-related protein ARP mRNA, complete cds Length = 3124 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 1934 tcccgctctcgctcccgctcccgctcc 1908
>dbj|AB103335.1| Paecilomyces tenuipes genes for DNA lyase, MAT1-2-1, complete cds, MAT1-1-1 pseudogene Length = 9741 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 342 ccgttcccgatctcgctcccgctcccgctcc 372 ||||||||| || |||||||||||||||||| Sbjct: 1453 ccgttcccgttcccgctcccgctcccgctcc 1423
>dbj|AK120873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M17, full insert sequence Length = 2517 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 213 ccgatcccgctcccgctcccgctcccg 187
>dbj|AK070080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045J04, full insert sequence Length = 2978 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 ccgatctcgctcccgctcccgctcccg 374 |||||| |||||||||||||||||||| Sbjct: 148 ccgatcccgctcccgctcccgctcccg 122
>gb|AF016005.1|AF016005 Homo sapiens chromosome 1 atrophin-1 related protein (DRPLA) mRNA, complete cds Length = 4598 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 2498 tcccgctctcgctcccgctcccgctcc 2472
>gb|AF041100.1|HSATLG5 Homo sapiens atrophin-1 like protein (ARG) gene, exon 5 Length = 601 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 326 tcccgctctcgctcccgctcccgctcc 300
>emb|AL831833.1|HSM803148 Homo sapiens mRNA; cDNA DKFZp547M0114 (from clone DKFZp547M0114) Length = 2391 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 1798 cgttcccgttctcgctctcgctctctctcccgttctcgc 1760
>dbj|AB020660.1| Homo sapiens mRNA for KIAA0853 protein, partial cds Length = 4363 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctcgc 381 |||||||| |||||||| ||||| | ||||||||||||| Sbjct: 220 cgttcccgttctcgctctcgctctctctcccgttctcgc 182
>dbj|AB036737.1| Homo sapiens mRNA for RERE, complete cds Length = 8035 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcc 372 ||||| ||||||||||||||||||||| Sbjct: 4232 tcccgctctcgctcccgctcccgctcc 4206
>ref|NM_111523.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G06480 mRNA, complete cds Length = 3605 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 ctctactactggaatccggagaccaacgtcactcagta 251 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 205 ctctattactggaatcctgaaaccaatgtcactcagta 242
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 44380 ctcgctcccgctcccgctcccg 44401
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence Length = 182182 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 49356 tcccgctctcgctcccgcgcccgctccctttctc 49323
>ref|NM_006412.3| Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) (AGPAT2), transcript variant 1, mRNA Length = 1576 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 71 ctcgctcccgctcccgctcccg 50
>ref|NM_001012727.1| Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) (AGPAT2), transcript variant 2, mRNA Length = 1480 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 71 ctcgctcccgctcccgctcccg 50
>ref|XM_852181.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 10 (LOC612759), mRNA Length = 3785 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 27 ctcgctcccgctcccgctcccg 48
>ref|XM_852139.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 9 (LOC612759), mRNA Length = 3670 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 10 ctcgctcccgctcccgctcccg 31
>ref|XM_852092.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 8 (LOC612759), mRNA Length = 3651 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 10 ctcgctcccgctcccgctcccg 31
>ref|XM_843724.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 1 (LOC612759), mRNA Length = 3672 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 10 ctcgctcccgctcccgctcccg 31
>ref|XM_851841.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 3 (LOC612759), mRNA Length = 2677 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 10 ctcgctcccgctcccgctcccg 31
>ref|XM_851804.1| PREDICTED: Canis familiaris similar to homeobox protein Meis2 isoform e, transcript variant 2 (LOC612759), mRNA Length = 3747 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 10 ctcgctcccgctcccgctcccg 31
>ref|XM_572740.1| Cryptococcus neoformans var. neoformans JEC21 ubiquitin-like conjugating enzyme (CNI00160) partial mRNA Length = 2064 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 1499 ctcgctcccgctcccgctcccg 1478
>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence Length = 86022 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 ctctactactggaatccggagaccaacgtcactcagta 251 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2738 ctctattactggaatcctgaaaccaatgtcactcagta 2775
>emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chromosome 9 Contains a novel gene, the gene for NEU1 protein (ZNEU1), the AGPAT2 gene for 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta), the 5' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 3' end of a novel gene (FLJ30346) and seven CpG islands, complete sequence Length = 149567 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 113441 ctcgctcccgctcccgctcccg 113462
>ref|XM_500136.1| Yarrowia lipolytica CLIB122, YALI0A16588g predicted mRNA Length = 4809 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcgc 381 |||||||||| ||||||||||||||| Sbjct: 3781 gctcccgctctcgctcccgttctcgc 3756
>gb|BT009959.1| Drosophila melanogaster RH08828 full insert cDNA Length = 3935 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 tcccgctcccgctcccgttctc 379 |||||||||||||||||||||| Sbjct: 445 tcccgctcccgctcccgttctc 424
>emb|AJ720000.1| Gallus gallus mRNA for hypothetical protein, clone 9e4 Length = 2274 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgca 382 ||||| |||||||||||||| || |||||||||| Sbjct: 838 cgatcccgctcccgctcccggtctcgttctcgca 871 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 tctcgctcccgctcccgctcccgttctcg 380 ||||| ||||||||||||||||| ||||| Sbjct: 835 tctcgatcccgctcccgctcccggtctcg 863
>emb|CR615685.1| full-length cDNA clone CS0DL011YF08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1465 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 22 ctcgctcccgctcccgctcccg 1
>emb|CR625982.1| full-length cDNA clone CS0DC026YN02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1463 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 44 ctcgctcccgctcccgctcccg 23
>emb|CR624126.1| full-length cDNA clone CS0DC001YD05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1510 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 53 ctcgctcccgctcccgctcccg 32
>emb|CR605868.1| full-length cDNA clone CS0DI056YC21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 65 ctcgctcccgctcccgctcccg 44
>emb|CR603192.1| full-length cDNA clone CS0DL012YE04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1515 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 67 ctcgctcccgctcccgctcccg 46
>emb|CR602303.1| full-length cDNA clone CS0DM012YB05 of Fetal liver of Homo sapiens (human) Length = 1489 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 47 ctcgctcccgctcccgctcccg 26
>emb|CR601358.1| full-length cDNA clone CS0DC023YF06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1498 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 36 ctcgctcccgctcccgctcccg 15
>emb|CR592360.1| full-length cDNA clone CS0DB004YP02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1500 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 53 ctcgctcccgctcccgctcccg 32
>ref|NM_176465.1| Drosophila melanogaster CG31211-RC, transcript variant C (CG31211), mRNA Length = 3019 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 2466 tcccgctctcgctcccgcgcccgctccctttctc 2433
>ref|NM_176464.1| Drosophila melanogaster CG31211-RB, transcript variant B (CG31211), mRNA Length = 3047 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 2494 tcccgctctcgctcccgcgcccgctccctttctc 2461
>ref|NM_141874.2| Drosophila melanogaster CG31211-RA, transcript variant A (CG31211), mRNA Length = 2990 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 2437 tcccgctctcgctcccgcgcccgctccctttctc 2404
>gb|AY051856.1| Drosophila melanogaster LD35413 full length cDNA Length = 2874 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 2420 tcccgctctcgctcccgcgcccgctccctttctc 2387
>gb|AC007725.5|AC007725 Drosophila melanogaster, chromosome 3R, region 87A-87A, BAC clone BACR03N24, complete sequence Length = 144152 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 130162 tcccgctctcgctcccgcgcccgctccctttctc 130129
>ref|XM_578837.1| PREDICTED: Rattus norvegicus similar to Ac1147 (LOC503301), mRNA Length = 1509 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 356 gctcccgctcccgctcccgttctcgc 381 |||||||||||||||||||| ||||| Sbjct: 674 gctcccgctcccgctcccgtcctcgc 699
>ref|NM_001006476.1| Gallus gallus similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS) (LOC423265), mRNA Length = 2274 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttctcgca 382 ||||| |||||||||||||| || |||||||||| Sbjct: 838 cgatcccgctcccgctcccggtctcgttctcgca 871 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 tctcgctcccgctcccgctcccgttctcg 380 ||||| ||||||||||||||||| ||||| Sbjct: 835 tctcgatcccgctcccgctcccggtctcg 863
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 cgcgaccaccgcgaccgcgacc 415 |||||||||||||||||||||| Sbjct: 203687 cgcgaccaccgcgaccgcgacc 203708 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ccgcgaccggcgccgccgcg 427 |||||||||||||||||||| Sbjct: 4011706 ccgcgaccggcgccgccgcg 4011725
>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete sequence Length = 226782 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctc 379 ||||| |||||||||||| ||||||||| ||||| Sbjct: 202522 tcccgctctcgctcccgcgcccgctccctttctc 202489
>gb|AF000237.1|AF000237 Homo sapiens lysophosphatidic acid acyltransferase mRNA, complete cds Length = 1522 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 35 ctcgctcccgctcccgctcccg 14
>gb|AF011374.1|AF011374 Homo sapiens lysophosphatidic acid acyltransferase mRNA, complete cds Length = 1527 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ctcgctcccgctcccgctcccg 374 |||||||||||||||||||||| Sbjct: 29 ctcgctcccgctcccgctcccg 8
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcgc 381 |||||||||| ||||||||||||||| Sbjct: 1701392 gctcccgctctcgctcccgttctcgc 1701367
>ref|NM_121465.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G14610 mRNA, complete cds Length = 2661 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 211 tacctctactactggaatccggagaccaacgtcactcagtacgag 255 |||||||||| |||||||| || ||||| || |||||||||||| Sbjct: 257 tacctctacttttggaatccagaaaccaatgttactcagtacgag 301
>ref|NM_202477.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.3 mRNA, complete cds Length = 2365 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 288 tggaatcctgagaccaatgttactcagtacgag 320
>ref|NM_111020.2| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.1 mRNA, complete cds Length = 2392 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 318 tggaatcctgagaccaatgttactcagtacgag 350
>ref|NM_180161.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.2 mRNA, complete cds Length = 2395 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 318 tggaatcctgagaccaatgttactcagtacgag 350
>ref|NM_001035542.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.4 mRNA, complete cds Length = 2289 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 318 tggaatcctgagaccaatgttactcagtacgag 350
>gb|AC135668.5| Mus musculus BAC clone RP23-280P7 from chromosome 6, complete sequence Length = 207975 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 176149 tcccgctcccgctcccgctcccgctcccg 176121 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 176143 tcccgctcccgctcccgctcccgctcccg 176115 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 176137 tcccgctcccgctcccgctcccgctccc 176110
>ref|XM_469154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 276 cgaccgccgcgaccgcgaccggcgc 300
>ref|XM_469153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 264 cgaccgccgcgaccgcgaccggcgc 288
>gb|DQ214128.1| Taeniopygia guttata clone 0058P0012E02 calretinin-like mRNA, complete sequence Length = 1159 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 |||||||| |||||||| ||||||||||| Sbjct: 50 tcccgatcccgctcccgatcccgctcccg 22
>gb|DQ214127.1| Taeniopygia guttata clone 0058P0012F02 calretinin-like mRNA, complete sequence Length = 1159 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 |||||||| |||||||| ||||||||||| Sbjct: 50 tcccgatcccgctcccgatcccgctcccg 22
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 21056 tcccgctcccgctcccgctcccgctcccg 21028 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 21050 tcccgctcccgctcccgctcccgctcccg 21022 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 21044 tcccgctcccgctcccgctcccgctcccg 21016 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 21059 cgctcccgctcccgctcccg 21040
>ref|XM_362857.1| Magnaporthe grisea 70-15 hypothetical protein (MG08580.4) partial cds Length = 1575 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccgt 375 ||||||||||||||||||||| Sbjct: 600 cgctcccgctcccgctcccgt 620
>gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, complete sequence Length = 131719 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 tcgctcccgctcccgctcccg 374 ||||||||||||||||||||| Sbjct: 40456 tcgctcccgctcccgctcccg 40436 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 40449 cgctcccgctcccgctcccg 40430 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 40452 tcccgctcccgctcccgctcccgctccc 40425
>ref|NM_026083.2| Mus musculus RIKEN cDNA 3110050K21 gene (3110050K21Rik), mRNA Length = 6151 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 2842 cgctcccgctcccgttctcgc 2822 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttc 377 ||||| |||||||| | ||||||||||||||| Sbjct: 2833 tcccgttctcgctctctctcccgctcccgttc 2802 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||| |||| ||||||||||| ||||||| Sbjct: 2569 tcccgctctcgttccctctcccgctccctttctcgc 2534
>ref|NM_144604.2| Homo sapiens conserved nuclear protein NHN1 (NHN1), mRNA Length = 3572 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 1430 tcccgctctcggtcccgctcccgctcccg 1402
>gb|BC094575.1| Mus musculus RIKEN cDNA 3110050K21 gene, mRNA (cDNA clone IMAGE:6855185) Length = 4752 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 1388 cgctcccgctcccgttctcgc 1368 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||| |||| ||||||||||| ||||||| Sbjct: 1173 tcccgctctcgttccctctcccgctccctttctcgc 1138
>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence Length = 169244 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 tcgctcccgctcccgctcccg 374 ||||||||||||||||||||| Sbjct: 64145 tcgctcccgctcccgctcccg 64165 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 64152 cgctcccgctcccgctcccg 64171 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 64149 tcccgctcccgctcccgctcccgctccc 64176
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 58623 cgaccgccgcgaccgcgaccggcgc 58647
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 55236 tcccgctctcggtcccgctcccgctcccg 55264
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 gcgaccgcgaccggcgccgccgcga 428 |||||||||||||||| |||||||| Sbjct: 26181 gcgaccgcgaccggcgtcgccgcga 26157
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 45571 tcccgctcccgctcccgctcccgctcccg 45599 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 45565 tcccgctcccgctcccgctcccgctcccg 45593 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 45562 cgctcccgctcccgctcccg 45581
>ref|XM_744212.1| Aspergillus fumigatus Af293 serine/threonine protein kinase (Afu2g01700) partial mRNA Length = 2382 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgtt 376 ||||||||||||||||||||| Sbjct: 1516 gctcccgctcccgctcccgtt 1496
>ref|XM_389113.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08937.1) partial mRNA Length = 1527 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgtt 376 ||||||||||||||||||||| Sbjct: 58 gctcccgctcccgctcccgtt 38
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 38025 tggaatcctgagaccaatgttactcagtacgag 37993
>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete sequence Length = 167991 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 137067 tcccgctcccgctcccgctcccgctcccg 137095 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 137061 tcccgctcccgctcccgctcccgctcccg 137089 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 137073 tcccgctcccgctcccgctcccgctccc 137100
>gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, complete sequence Length = 198097 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 138491 tcccgctcccgctcccgctcccgctcccg 138519 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 138497 tcccgctcccgctcccgctcccgctccc 138524
>gb|BC050463.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone MGC:54295 IMAGE:6042036), complete cds Length = 3572 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 1430 tcccgctctcggtcccgctcccgctcccg 1402
>gb|BC001584.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone IMAGE:3461401), partial cds Length = 2837 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 579 tcccgctctcggtcccgctcccgctcccg 551
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 1691214 tcccgctcccgctcccgctcccgctcccg 1691186 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1691217 cgctcccgctcccgctcccg 1691198
>emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chromosome 1 Contains the 5' end of the PSMB2 gene for proteasome (prosome, macropain) subunit, beta type, 2, a novel transcript (FLJ38984), a putative novel transcript, the CLSPN gene for claspin homolog (Xenopus laevis) and the 5' end of the EIF2C4 gene for eukaryotic translation initiation factor 2C, 4, complete sequence Length = 194296 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgtt 376 ||||||||||||||||||||| Sbjct: 6100 gctcccgctcccgctcccgtt 6080
>gb|BT009670.1| Arabidopsis thaliana At3g01540 gene, complete cds Length = 1857 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 109 tggaatcctgagaccaatgttactcagtacgag 141
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 211 tacctctactactggaatccggagaccaacgtcactcagtacgag 255 |||||||||| |||||||| || ||||| || |||||||||||| Sbjct: 48281 tacctctacttttggaatccagaaaccaatgttactcagtacgag 48325
>emb|AL121806.2|DMBR42I17 Drosophila melanogaster BAC clone BACR42I17 Length = 155168 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 111544 cgctcccgctcccgttctcgc 111564
>emb|AL928592.13| Mouse DNA sequence from clone RP24-168J7 on chromosome 4 Contains a novel pseudogene and a novel gene, complete sequence Length = 126611 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 41286 tcccgctcccgctcccgctcccgctcccg 41314
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 tgccccagatctgccgcagcg 123 ||||||||||||||||||||| Sbjct: 1694574 tgccccagatctgccgcagcg 1694554
>gb|AY122074.1| Drosophila melanogaster AT16994 full insert cDNA Length = 4080 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcg 380 ||||||| ||||||||||||||||| Sbjct: 1648 gctcccgttcccgctcccgttctcg 1624
>gb|AY119181.1| Drosophila melanogaster SD02285 full insert cDNA Length = 5339 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 2251 cgctcccgctcccgttctcgc 2231
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 124115 cgttcccgctcgcgctcccgctcccgttcgcgttctc 124079
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156096 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 cgatctcgctcccgctcccgctcccgttc 377 ||||||||||||| |||||| |||||||| Sbjct: 30088 cgatctcgctccctctcccgttcccgttc 30116
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctc 379 ||||||||||||||||| ||||||| Sbjct: 33096 cgctcccgctcccgctcgcgttctc 33072
>dbj|AK091849.1| Homo sapiens cDNA FLJ34530 fis, clone HLUNG2008153 Length = 1989 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 310 tcccgctctcggtcccgctcccgctcccg 282
>ref|NM_206663.1| Drosophila melanogaster CG12075-RB, transcript variant B (CG12075), mRNA Length = 3552 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 cgatctcgctcccgctcccgctcccgttc 377 ||||||||||||| |||||| |||||||| Sbjct: 2567 cgatctcgctccctctcccgttcccgttc 2539
>gb|AC099325.4| Oryza sativa chromosome 10 BAC OSJNBb0048O22 genomic sequence, complete sequence Length = 134825 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 ccaccgcgaccgcgaccggcgccgc 423 |||||||||||||||||| |||||| Sbjct: 116299 ccaccgcgaccgcgaccgccgccgc 116323
>ref|NM_166897.1| Drosophila melanogaster broad CG11491-RC, transcript variant C (br), mRNA Length = 3886 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 2259 cgttcccgctcgcgctcccgctcccgttcgcgttctc 2223
>ref|NM_166896.1| Drosophila melanogaster broad CG11491-RB, transcript variant B (br), mRNA Length = 4174 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 2547 cgttcccgctcgcgctcccgctcccgttcgcgttctc 2511
>ref|NM_166874.1| Drosophila melanogaster CG3638-RA, transcript variant A (CG3638), mRNA Length = 6905 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 3929 cgctcccgctcccgttctcgc 3909
>ref|NM_166873.1| Drosophila melanogaster CG3638-RB, transcript variant B (CG3638), mRNA Length = 6968 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 3992 cgctcccgctcccgttctcgc 3972
>ref|NM_166872.1| Drosophila melanogaster CG3638-RD, transcript variant D (CG3638), mRNA Length = 6653 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 3812 cgctcccgctcccgttctcgc 3792
>gb|AC099040.10| Oryza sativa chromosome 10 BAC OSJNBa0004P12 genomic sequence, complete sequence Length = 137029 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgc 423 |||||||||||||||||| |||||| Sbjct: 118659 ccaccgcgaccgcgaccgccgccgc 118635
>ref|NM_136533.1| Drosophila melanogaster CG11641-RA (CG11641), mRNA Length = 4084 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcg 380 ||||||| ||||||||||||||||| Sbjct: 1648 gctcccgttcccgctcccgttctcg 1624
>ref|NM_132432.1| Drosophila melanogaster CG2186-RA (CG2186), mRNA Length = 4449 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctc 379 ||||||||||||||||| ||||||| Sbjct: 2277 cgctcccgctcccgctcgcgttctc 2253
>ref|NM_132278.2| Drosophila melanogaster CG12075-RA, transcript variant A (CG12075), mRNA Length = 3537 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 cgatctcgctcccgctcccgctcccgttc 377 ||||||||||||| |||||| |||||||| Sbjct: 2552 cgatctcgctccctctcccgttcccgttc 2524
>ref|NM_130541.3| Drosophila melanogaster CG3638-RC, transcript variant C (CG3638), mRNA Length = 6788 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 3812 cgctcccgctcccgttctcgc 3792
>gb|AF462866.1|AF462866 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA sequence Length = 2415 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 312 tggaatcctgagaccaatgttactcagtacgag 344
>gb|AC104410.3| Drosophila melanogaster X BAC RP98-10H22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179869 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 126382 cgctcccgctcccgttctcgc 126402
>gb|AY069512.1| Drosophila melanogaster LD23217 full length cDNA Length = 3083 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 cgatctcgctcccgctcccgctcccgttc 377 ||||||||||||| |||||| |||||||| Sbjct: 2087 cgatctcgctccctctcccgttcccgttc 2059
>gb|AY069756.1| Drosophila melanogaster LP12157 full length cDNA Length = 4174 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 2547 cgttcccgctcgcgctcccgctcccgttcgcgttctc 2511
>gb|AY062591.1| Arabidopsis thaliana RNA helicase, DRH1 (At3g01540; F4P13.9) mRNA, complete cds Length = 2264 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 312 tggaatcctgagaccaatgttactcagtacgag 344
>gb|AF428313.1|AF428313 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds Length = 2067 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 214 tggaatcctgagaccaatgttactcagtacgag 246
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctcgcac 383 |||||||||||||||||||| || ||||| Sbjct: 140142 cgctcccgctcccgctcccgctcccgcac 140114
>gb|AY050375.1| Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds Length = 2165 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 312 tggaatcctgagaccaatgttactcagtacgag 344
>gb|BT023500.1| Drosophila melanogaster LD29862 full insert cDNA Length = 4423 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctc 379 ||||||||||||||||| ||||||| Sbjct: 2237 cgctcccgctcccgctcgcgttctc 2213
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 accgcgaccggcgccgccgcg 427 ||||||||||||||||||||| Sbjct: 4045036 accgcgaccggcgccgccgcg 4045056 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 gcgaccaccgcgaccgcgac 414 |||||||||||||||||||| Sbjct: 906251 gcgaccaccgcgaccgcgac 906270
>gb|BC082576.1| Mus musculus RIKEN cDNA 3110050K21 gene, mRNA (cDNA clone IMAGE:30619693) Length = 3706 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 353 cgctcccgctcccgttctcgc 333 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttc 377 ||||| |||||||| | ||||||||||||||| Sbjct: 344 tcccgttctcgctctctctcccgctcccgttc 313
>dbj|AK011176.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600010B19 product:hypothetical Arginine-rich region containing protein, full insert sequence Length = 780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 114 cgctcccgctcccgttctcgc 94
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcg 380 ||||||| ||||||||||||||||| Sbjct: 155682 gctcccgttcccgctcccgttctcg 155658
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgccgcg 427 |||||||||||||||||| ||| |||||| Sbjct: 14212763 ccaccgcgaccgcgaccgtcgctgccgcg 14212735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 25287243 cgctcccgctcccgctcccg 25287262
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgc 423 |||||||||||||||||| |||||| Sbjct: 7050508 ccaccgcgaccgcgaccgccgccgc 7050484 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctcgcac 383 |||||||||||||||||||| || ||||| Sbjct: 4143313 cgctcccgctcccgctcccgctcccgcac 4143285 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 19438087 cgctcccgctcccgctcccg 19438068 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 19438081 cgctcccgctcccgctcccg 19438062
>gb|AC105049.4| Homo sapiens chromosome 8, clone RP11-299M14, complete sequence Length = 92291 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ctcccgctcccgctcccgttc 377 ||||||||||||||||||||| Sbjct: 19545 ctcccgctcccgctcccgttc 19525
>emb|BX823517.1|CNS0A7FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2267 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 288 tggaatcctgagaccaatgttactcagtacgag 320
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 gtggacggcaccaccggctac 213 ||||||||||||||||||||| Sbjct: 340835 gtggacggcaccaccggctac 340815 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 tcggcgcgaccaccgcgaccgcga 413 |||||||| ||||||||||||||| Sbjct: 4090250 tcggcgcgcccaccgcgaccgcga 4090227 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 accgcgaccggcgccgccgcgacg 430 |||||||||||||| ||||||||| Sbjct: 1056411 accgcgaccggcgcggccgcgacg 1056434
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 |||| ||| |||||||||||||||||||| Sbjct: 135738 tccccatcccgctcccgctcccgctcccg 135766
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 |||| ||| |||||||||||||||||||| Sbjct: 51937 tccccatcccgctcccgctcccgctcccg 51965
>dbj|AK119865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A05, full insert sequence Length = 3917 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 gcgcgaccaccgcgaccgcgaccgg 417 |||||||| |||||||||||||||| Sbjct: 199 gcgcgacccccgcgaccgcgaccgg 175
>gb|AC125292.4| Drosophila melanogaster X BAC CH223-5O10 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 95026 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctc 379 ||||||||||||||||| ||||||| Sbjct: 89075 cgctcccgctcccgctcgcgttctc 89051
>emb|X13408.1|PTRBCS Pinus thunbergii mRNA for ribulose bisphosphate carboxylase small subunit Length = 911 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgtt 376 ||||||||||||||||||||| Sbjct: 122 gctcccgctcccgctcccgtt 102
>dbj|AK105347.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A01, full insert sequence Length = 1005 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 cgaccaccgcgaccgcgaccggcgc 420 ||||| ||||||||||||||||||| Sbjct: 276 cgaccgccgcgaccgcgaccggcgc 300
>gb|AC155813.2| Mus musculus BAC clone RP24-167L2 from 9, complete sequence Length = 166097 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 38891 tcccgctcccgctcccgctcccgctcccg 38919 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 38897 tcccgctcccgctcccgctcccgctccc 38924
>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete sequence Length = 265215 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcg 380 ||||||| ||||||||||||||||| Sbjct: 121239 gctcccgttcccgctcccgttctcg 121215
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctc 379 ||||||||||||||||| ||||||| Sbjct: 88147 cgctcccgctcccgctcgcgttctc 88123
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete sequence Length = 334222 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 cgatctcgctcccgctcccgctcccgttc 377 ||||||||||||| |||||| |||||||| Sbjct: 156300 cgatctcgctccctctcccgttcccgttc 156272
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 186425 cgttcccgctcgcgctcccgctcccgttcgcgttctc 186389
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 67625 cgctcccgctcccgttctcgc 67645
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones DS08614 and DS00667, complete sequence Length = 100575 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcg 380 ||||||| ||||||||||||||||| Sbjct: 70627 gctcccgttcccgctcccgttctcg 70603
>gb|AY910703.1| Cuphea ingrata 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 605 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 405 cgaccgcgaccggcgccgccgcgac 429 |||||||||| |||||||||||||| Sbjct: 94 cgaccgcgacaggcgccgccgcgac 70
>dbj|AK122593.1| Homo sapiens mRNA for FLJ00419 protein Length = 4662 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| ||||| ||||||||||||||||| Sbjct: 612 tcccgctctcggtcccgctcccgctcccg 584
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 tcccgctcccgctcccgttctcgca 382 ||||||||||||| ||||||||||| Sbjct: 836905 tcccgctcccgcttccgttctcgca 836929
>dbj|AP002982.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1683C8 Length = 176644 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctcccg 374 ||||| || |||||||||||||||||||| Sbjct: 134072 tcccgctcccgctcccgctcccgctcccg 134100 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 134078 tcccgctcccgctcccgctcccgctccc 134105
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgc 423 |||||||||||||||||| |||||| Sbjct: 7053795 ccaccgcgaccgcgaccgccgccgc 7053771 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccgttctcgcac 383 |||||||||||||||||||| || ||||| Sbjct: 4144134 cgctcccgctcccgctcccgctcccgcac 4144106 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 19449363 cgctcccgctcccgctcccg 19449344 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 19449357 cgctcccgctcccgctcccg 19449338
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgccgcg 427 |||||||||||||||||| ||| |||||| Sbjct: 14167043 ccaccgcgaccgcgaccgtcgctgccgcg 14167015 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 25215419 cgctcccgctcccgctcccg 25215438
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgccgcg 427 |||||||||||||||||| ||| |||||| Sbjct: 8381 ccaccgcgaccgcgaccgtcgctgccgcg 8353
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ccaccgcgaccgcgaccggcgccgccgcg 427 |||||||||||||||||| ||| |||||| Sbjct: 139304 ccaccgcgaccgcgaccgtcgctgccgcg 139276
>gb|BC071605.1| Homo sapiens nuclear receptor binding protein 2, mRNA (cDNA clone IMAGE:4375917) Length = 3892 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ctcccgctcccgctcccgttc 377 ||||||||||||||||||||| Sbjct: 174 ctcccgctcccgctcccgttc 154
>gb|U51585.1|DMU51585 Drosophila melanogaster Broad-Complex protein isoform Z4 (BR-C) mRNA, complete cds Length = 3869 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 343 cgttcccgatctcgctcccgctcccgctcccgttctc 379 |||||||| || |||||||||||||| || ||||||| Sbjct: 2263 cgttcccgctcgcgctcccgctcccgttcgcgttctc 2227
>gb|AC161877.5| Mus musculus BAC clone RP23-350G11 from chromosome 14, complete sequence Length = 227413 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 cgctcccgctcccgttctcgc 381 ||||||||||||||||||||| Sbjct: 150303 cgctcccgctcccgttctcgc 150283 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttc 377 ||||| |||||||| | ||||||||||||||| Sbjct: 150294 tcccgttctcgctctctctcccgctcccgttc 150263 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttctcgc 381 ||||| ||||| |||| ||||||||||| ||||||| Sbjct: 150030 tcccgctctcgttccctctcccgctccctttctcgc 149995
>dbj|AB010259.1| Arabidopsis thaliana mRNA for DRH1, complete cds Length = 1924 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 223 tggaatccggagaccaacgtcactcagtacgag 255 |||||||| |||||||| || |||||||||||| Sbjct: 116 tggaatcctgagaccaatgttactcagtacgag 148
>ref|NM_032797.4| Homo sapiens apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death (AMID), mRNA Length = 3240 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 165 cgctcccgctcccgctcccg 146
>gb|AC102795.28| Mus musculus chromosome 3, clone RP23-182B7, complete sequence Length = 226270 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaagaaggaaagggaaaaa 20 |||||||||||||||||||| Sbjct: 195205 aaaagaaggaaagggaaaaa 195224
>gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, complete sequence Length = 171669 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaagaaggaaagggaaaaa 20 |||||||||||||||||||| Sbjct: 74454 aaaagaaggaaagggaaaaa 74435
>ref|XM_512743.1| PREDICTED: Pan troglodytes LOC456120 (LOC456120), mRNA Length = 3105 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1483 cgctcccgctcccgctcccg 1502
>ref|NM_188888.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 949 cgctcccgctcccgctcccg 930
>gb|DQ216011.1| Taeniopygia guttata clone 0063P0019D11 signal peptidase complex (18kD)-like mRNA, complete sequence Length = 859 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 30 cgctcccgctcccgctcccg 11
>gb|DQ213416.1| Taeniopygia guttata clone 0065P0010H03 lipin 2-like mRNA, complete sequence Length = 658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gctcccgctcccgctcccgt 375 |||||||||||||||||||| Sbjct: 75 gctcccgctcccgctcccgt 94
>ref|NM_001003108.1| Canis familiaris G protein-coupled receptor 83 (GPR83), mRNA Length = 1808 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 85 cgctcccgctcccgctcccg 66
>ref|XM_463882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 94 cgctcccgctcccgctcccg 113
>ref|NM_197357.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.12), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 50 cgctcccgctcccgctcccg 69 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 44 cgctcccgctcccgctcccg 63
>ref|XM_463452.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 207 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccggcgccgccgcgacgaac 433 |||||||||||||||||||| Sbjct: 125 ccggcgccgccgcgacgaac 144
>ref|NM_193757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 82 cgctcccgctcccgctcccg 101
>ref|NM_186930.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 502 cgctcccgctcccgctcccg 521 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 496 cgctcccgctcccgctcccg 515
>ref|XM_473002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 72 cgctcccgctcccgctcccg 53
>gb|BT016151.1| Drosophila melanogaster AT17006 full insert cDNA Length = 4407 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||||||||| |||| ||||||||||| Sbjct: 477 tcccgatctcggtccctctcccgctccc 450
>gb|BT016144.1| Drosophila melanogaster AT24316 full insert cDNA Length = 4151 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||||||||| |||| ||||||||||| Sbjct: 226 tcccgatctcggtccctctcccgctccc 199
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 99511 cgctcccgctcccgctcccg 99530
>gb|AC131980.9| Mus musculus chromosome 1, clone RP24-170O7, complete sequence Length = 200100 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaagaaggaaagggaaaaa 20 |||||||||||||||||||| Sbjct: 113430 aaaagaaggaaagggaaaaa 113449
>ref|XM_588828.2| PREDICTED: Bos taurus similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 (LOC511484), mRNA Length = 2463 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1766 cgctcccgctcccgctcccg 1747
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 accgcgaccggcgccgccgc 426 |||||||||||||||||||| Sbjct: 3767554 accgcgaccggcgccgccgc 3767535
>ref|XM_603745.2| PREDICTED: Bos taurus similar to CTD-binding SR-like protein rA9 (LOC525392), mRNA Length = 4966 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccgttctcgca 382 |||||||||||||||||| |||| |||| Sbjct: 2845 cgctcccgctcccgctccagttcccgca 2872
>ref|XM_360252.1| Magnaporthe grisea 70-15 hypothetical protein (MG05626.4) partial mRNA Length = 3651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gctcccgctcccgctcccgt 375 |||||||||||||||||||| Sbjct: 2446 gctcccgctcccgctcccgt 2465
>ref|XM_366929.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG03005.4) partial mRNA Length = 1674 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 139 cgctcccgctcccgctcccg 120
>ref|XM_415107.1| PREDICTED: Gallus gallus similar to silencing mediator of retinoic acid and thyroid hormone receptor extended isoform (LOC416815), mRNA Length = 12827 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctc 365 |||||||||||||||||||| Sbjct: 10537 tcccgatctcgctcccgctc 10518
>ref|XM_421170.1| PREDICTED: Gallus gallus similar to S164 (LOC423250), mRNA Length = 2735 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttc 377 |||| |||||||||||| || ||||||||||| Sbjct: 206 tccctatctcgctcccgttcacgctcccgttc 175
>ref|XM_960433.1| Neurospora crassa OR74A hypothetical protein (NCU01895.1) partial mRNA Length = 3345 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcgcac 383 ||||| |||||||||||||||| ||||| Sbjct: 293 gctccagctcccgctcccgttcccgcac 266
>gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, complete sequence Length = 142742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaagaaggaaagggaaaaa 20 |||||||||||||||||||| Sbjct: 18586 aaaagaaggaaagggaaaaa 18605
>ref|XM_329084.1| Neurospora crassa OR74A hypothetical protein (NCU01895.1) partial mRNA Length = 3345 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 356 gctcccgctcccgctcccgttctcgcac 383 ||||| |||||||||||||||| ||||| Sbjct: 293 gctccagctcccgctcccgttcccgcac 266
>ref|XM_581195.2| PREDICTED: Bos taurus similar to TNF receptor-associated factor 3 interacting protein 1 (LOC504984), partial mRNA Length = 1895 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 818 cgctcccgctcccgctcccg 799
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 37058 cgctcccgctcccgctcccg 37039
>ref|NM_007056.1| Homo sapiens splicing factor, arginine/serine-rich 16 (suppressor-of-white-apricot homolog, Drosophila) (SFRS16), mRNA Length = 2234 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1368 cgctcccgctcccgctcccg 1387
>ref|XM_655383.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2871.2), mRNA Length = 2613 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 711 cgctcccgctcccgctcccg 730
>ref|XM_549363.2| PREDICTED: Canis familiaris similar to plexin B3 (LOC492243), mRNA Length = 5998 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 5015 cgctcccgctcccgctcccg 4996
>ref|XM_974040.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 4 (Phf3), mRNA Length = 4180 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1494 cgctcccgctcccgctcccg 1475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1488 cgctcccgctcccgctcccg 1469 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 1491 tcccgctcccgctcccgctcccgctccc 1464
>ref|XM_974079.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 5 (Phf3), mRNA Length = 4562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1876 cgctcccgctcccgctcccg 1857 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1870 cgctcccgctcccgctcccg 1851 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 1873 tcccgctcccgctcccgctcccgctccc 1846
>ref|XM_974113.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 6 (Phf3), mRNA Length = 4750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 2064 cgctcccgctcccgctcccg 2045 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 2058 cgctcccgctcccgctcccg 2039 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 2061 tcccgctcccgctcccgctcccgctccc 2034
>ref|XM_974154.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 7 (Phf3), mRNA Length = 7295 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4609 cgctcccgctcccgctcccg 4590 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4603 cgctcccgctcccgctcccg 4584 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 4606 tcccgctcccgctcccgctcccgctccc 4579
>ref|XM_974187.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 8 (Phf3), mRNA Length = 5869 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 3183 cgctcccgctcccgctcccg 3164 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 3177 cgctcccgctcccgctcccg 3158 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 3180 tcccgctcccgctcccgctcccgctccc 3153
>ref|XM_974221.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 9 (Phf3), mRNA Length = 7561 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4875 cgctcccgctcccgctcccg 4856 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4869 cgctcccgctcccgctcccg 4850 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 4872 tcccgctcccgctcccgctcccgctccc 4845
>ref|XM_847992.1| PREDICTED: Canis familiaris similar to nuclear receptor co-repressor 2 (LOC486242), mRNA Length = 7786 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||||||||| || ||||||||||||| Sbjct: 5516 tcccgatctcgatctcgctcccgctccc 5489
>ref|XM_980418.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 10 (Phf3), mRNA Length = 4180 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1494 cgctcccgctcccgctcccg 1475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1488 cgctcccgctcccgctcccg 1469 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 1491 tcccgctcccgctcccgctcccgctccc 1464
>ref|XM_980449.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 11 (Phf3), mRNA Length = 4562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1876 cgctcccgctcccgctcccg 1857 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1870 cgctcccgctcccgctcccg 1851 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 1873 tcccgctcccgctcccgctcccgctccc 1846
>ref|XM_980481.1| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 12 (Phf3), mRNA Length = 4750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 2064 cgctcccgctcccgctcccg 2045 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 2058 cgctcccgctcccgctcccg 2039 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 2061 tcccgctcccgctcccgctcccgctccc 2034
>ref|XM_897697.2| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 9 (Phf3), mRNA Length = 7295 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4609 cgctcccgctcccgctcccg 4590 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4603 cgctcccgctcccgctcccg 4584 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 4606 tcccgctcccgctcccgctcccgctccc 4579
>ref|XM_897637.2| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 4 (Phf3), mRNA Length = 5869 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 3183 cgctcccgctcccgctcccg 3164 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 3177 cgctcccgctcccgctcccg 3158 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 3180 tcccgctcccgctcccgctcccgctccc 3153
>ref|XM_129836.7| PREDICTED: Mus musculus PHD finger protein 3, transcript variant 1 (Phf3), mRNA Length = 7561 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4875 cgctcccgctcccgctcccg 4856 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 4869 cgctcccgctcccgctcccg 4850 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 4872 tcccgctcccgctcccgctcccgctccc 4845
>ref|XM_543305.2| PREDICTED: Canis familiaris similar to integrin-linked kinase-associated protein phosphatase 2C isoform 2, transcript variant 1 (LOC486179), mRNA Length = 1342 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 accgcgaccgcgaccggcgccgcc 424 |||||||||||||||| ||||||| Sbjct: 15 accgcgaccgcgaccgccgccgcc 38
>ref|XM_754472.1| Ustilago maydis 521 hypothetical protein (UM03418.1) partial mRNA Length = 4074 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ctcgctcccgctcccgctcc 372 |||||||||||||||||||| Sbjct: 142 ctcgctcccgctcccgctcc 161
>ref|XM_754958.1| Ustilago maydis 521 hypothetical protein (UM03904.1) partial mRNA Length = 2367 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 657 cgctcccgctcccgctcccg 676
>ref|XM_540335.2| PREDICTED: Canis familiaris similar to protein phosphatase 1J (PP2C domain containing), transcript variant 1 (LOC483217), mRNA Length = 1717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 196 cgctcccgctcccgctcccg 177
>ref|XM_748823.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g07180) partial mRNA Length = 2511 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 tcccgatctcgctcccgctcccgctcccgttc 377 ||||||||||| ||||| ||||| |||||||| Sbjct: 1889 tcccgatctcggtcccggtcccgttcccgttc 1858
>ref|XM_385349.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05173.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 894 cgctcccgctcccgctcccg 913
>ref|XM_388859.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08683.1) partial mRNA Length = 8190 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 7980 cgctcccgctcccgctcccg 7999
>gb|AC124469.4| Mus musculus BAC clone RP24-172B22 from chromosome 1, complete sequence Length = 162294 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 111373 cgctcccgctcccgctcccg 111392 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 tcccgatctcgctcccgctcccgctccc 373 ||||| || ||||||||||||||||||| Sbjct: 111370 tcccgctcccgctcccgctcccgctccc 111397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 111367 cgctcccgctcccgctcccg 111386
>gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, complete sequence Length = 152782 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaagaaggaaagggaaaaa 20 |||||||||||||||||||| Sbjct: 80762 aaaagaaggaaagggaaaaa 80743
>emb|CR726723.2|CNS0GNOP Tetraodon nigroviridis full-length cDNA Length = 1018 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gctcccgctcccgctcccgt 375 |||||||||||||||||||| Sbjct: 384 gctcccgctcccgctcccgt 403
>ref|XM_858138.1| PREDICTED: Canis familiaris similar to SCC-112 protein, transcript variant 3 (LOC479103), mRNA Length = 2693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 223 cgctcccgctcccgctcccg 242 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 217 cgctcccgctcccgctcccg 236
>ref|XM_843700.1| PREDICTED: Canis familiaris similar to RED protein (LOC607109), mRNA Length = 1906 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 tctcgctcccgctcccgctcccgttctc 379 ||||| ||||||||||||||||| |||| Sbjct: 1162 tctcggtcccgctcccgctcccggtctc 1135
>gb|AY358944.1| Homo sapiens clone DNA38269 SWAP2 (UNQ2428) mRNA, complete cds Length = 2276 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 1349 cgctcccgctcccgctcccg 1368
>emb|CR653690.2|CNS0F3CW Tetraodon nigroviridis full-length cDNA Length = 552 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 cgcgaccaccgcgaccgcga 413 |||||||||||||||||||| Sbjct: 38 cgcgaccaccgcgaccgcga 57
>gb|AY376350.1| Homo sapiens cyclin-dependent kinase 5, regulatory subunit 1 (p35) (CDK5R1) gene, complete cds Length = 4525 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 125 cgctcccgctcccgctcccg 106
>emb|AL731540.4| Human DNA sequence from clone RP11-367H5 on chromosome 10 Contains the H2AFY2 gene for H2A histone family (member Y2), the gene for apoptosis-inducing factor (AIF)-homologous mitochondrion-associated inducer of death (AMID), a novel gene (MGC34695), the SARA1 gene for SAR1a gene homolog 1 (S. cerevisiae), the PP gene for pyrophosphatase (inorganic), a novel gene and five CpG islands, complete sequence Length = 186875 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctcccgctcccgctcccg 374 |||||||||||||||||||| Sbjct: 75312 cgctcccgctcccgctcccg 75331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,995,603 Number of Sequences: 3902068 Number of extensions: 1995603 Number of successful extensions: 53833 Number of sequences better than 10.0: 382 Number of HSP's better than 10.0 without gapping: 396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49738 Number of HSP's gapped (non-prelim): 3947 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)