Clone Information

BLAST Search Result

Clone Name	bastl08e06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)	34	0.17
2	Y4KQ_RHISN (P55535) Very hypothetical 15.3 kDa protein y4kQ	32	0.83
3	KPC4_DROME (P83099) Putative protein kinase C, delta type homolo...	32	0.83
4	ESR2_SPAAU (Q9W6M2) Estrogen receptor beta (ER-beta)	30	2.4
5	ASXL1_MOUSE (P59598) Putative Polycomb group protein ASXL1 (Addi...	30	2.4
6	WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...	30	2.4
7	GSK3H_DROME (P83101) Putative glycogen synthase kinase-3 homolog...	30	2.4
8	CWC25_CRYNE (Q5KIP8) Pre-mRNA-splicing factor CWC25	30	3.2
9	5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Sero...	30	3.2
10	TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TR...	30	3.2
11	FZD9_MOUSE (Q9R216) Frizzled 9 precursor (Frizzled-9) (Fz-9) (mF...	30	3.2
12	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	30	4.1
13	PIGO_MOUSE (Q9JJI6) Phosphatidylinositol-glycan biosynthesis, cl...	30	4.1
14	CNRC_RALME (P37974) Nickel and cobalt resistance protein cnrC pr...	30	4.1
15	IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2	30	4.1
16	HDAC7_MOUSE (Q8C2B3) Histone deacetylase 7a (HD7a)	30	4.1
17	CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (...	30	4.1
18	SNUT3_BRARE (Q6DH74) U4/U6.U5 tri-snRNP-associated protein 3	29	5.4
19	RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-ass...	29	5.4
20	UPK3B_HUMAN (Q9BT76) Uroplakin-3B precursor (Uroplakin IIIb) (UP...	29	5.4
21	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	29	5.4
22	ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2	29	5.4
23	IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B ...	29	5.4
24	SSPO_BOVIN (P98167) SCO-spondin (Fragment)	29	5.4
25	GRPE2_STRAW (Q826F5) Protein grpE 2 (HSP-70 cofactor 2)	29	5.4
26	PSAB_PROMA (Q9RDV0) Photosystem I P700 chlorophyll a apoprotein ...	29	5.4
27	SUV92_MOUSE (Q9EQQ0) Histone-lysine N-methyltransferase, H3 lysi...	29	7.1
28	ADA2B_DIDMA (O77715) Alpha-2B adrenergic receptor (Alpha-2B adre...	29	7.1
29	TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein	29	7.1
30	ANR18_HUMAN (Q8IVF6) Ankyrin repeat domain-containing protein 18A	29	7.1
31	UPPS_XANOR (Q5H1E5) Undecaprenyl pyrophosphate synthetase (EC 2....	29	7.1
32	ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I...	29	7.1
33	TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF...	29	7.1
34	PUR2_MOUSE (Q64737) Trifunctional purine biosynthetic protein ad...	29	7.1
35	MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)	29	7.1
36	AT10B_HUMAN (O94823) Probable phospholipid-transporting ATPase V...	29	7.1
37	PSAB_MESVI (Q9MUR7) Photosystem I P700 chlorophyll a apoprotein ...	29	7.1
38	PSAB_HUPLU (Q5SD11) Photosystem I P700 chlorophyll a apoprotein ...	29	7.1
39	IWS1_XENTR (Q505H7) IWS1-like protein	29	7.1
40	NAC2_CHLRE (Q9LEM8) PsbD mRNA maturation factor Nac2, chloroplas...	28	9.2
41	THIC_METKA (Q8TZ33) Thiamine biosynthesis protein thiC	28	9.2
42	RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1	28	9.2
43	RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1	28	9.2
44	RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1	28	9.2
45	RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1	28	9.2
46	RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain...	28	9.2
47	IF3A_CAEEL (P34339) Probable eukaryotic translation initiation f...	28	9.2
48	CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CH...	28	9.2
49	YD186_YEAST (P48568) Hypothetical 32.2 kDa protein in PPH22-VMA1...	28	9.2
50	GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and bra...	28	9.2
51	PUR2_HUMAN (P22102) Trifunctional purine biosynthetic protein ad...	28	9.2
52	TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (T...	28	9.2
53	PSAB_MARPO (P06408) Photosystem I P700 chlorophyll a apoprotein ...	28	9.2
54	PSAB_ANTFO (Q85AV8) Photosystem I P700 chlorophyll a apoprotein ...	28	9.2

>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)|
          Length = 596

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 20/76 (26%), Positives = 32/76 (42%)
 Frame = +1

Query: 1   KAKHTPKRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRL 180
           KAK    ++ +      D+ +    +SE       E   DA++ P  +     S   +RL
Sbjct: 52  KAKKEKSKKQKVEHMSSDEEQKNTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRL 111

Query: 181 RRSPGDSAPFTCLGIS 228
            +  GD   FT LG+S
Sbjct: 112 PQQDGDPVKFTELGLS 127

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>Y4KQ_RHISN (P55535) Very hypothetical 15.3 kDa protein y4kQ|
          Length = 142

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 220 GISSLCCCAVVPRSPLTLGPAPVGVGEPH 306
           G SS+ C  +  R P+ L PAP G   PH
Sbjct: 77  GASSIGCVPISARIPMRLPPAPAGASRPH 105

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>KPC4_DROME (P83099) Putative protein kinase C, delta type homolog (EC|
           2.7.11.13)
          Length = 643

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 20/101 (19%)
 Frame = -1

Query: 374 LRRKRSANTYSVGRRRAKASG--------HQWGSPTPTGAGPSVSGDLGTTA---QQQRD 228
           +R+++++N+ S   +R ++SG        ++  S + +GAG  +SG  G +     Q RD
Sbjct: 8   VRKQKTSNSSS---QRPRSSGGSTRHETRYKQSSTSSSGAGSGLSGASGASGARRDQYRD 64

Query: 227 ---------EIPRQVNGAESPGERRSRTAAGERASEQCGIG 132
                    E+PRQ +  E+    R  +A G    E+ GIG
Sbjct: 65  RDHYGKHSFELPRQHSKEEAYHRDRESSAGGVDRGERSGIG 105

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>ESR2_SPAAU (Q9W6M2) Estrogen receptor beta (ER-beta)|
          Length = 559

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
 Frame = +2

Query: 167 PPCGSDAPPGTPRHSPA--WESH--LSAAAPW----SRGRH*RWDQRPWVSASPTDVRLP 322
           PP  SD P      SP+  W SH  +    P     +R +H +  Q PWV  SP D  L 
Sbjct: 69  PPAISDRPSVHQTLSPSLFWPSHGHVGTTLPLHHLQARPQHGQAVQSPWVELSPLDNVLT 128

Query: 323 SRAGGRR 343
           S    RR
Sbjct: 129 SSKSARR 135

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>ASXL1_MOUSE (P59598) Putative Polycomb group protein ASXL1 (Additional sex|
           combs-like protein 1)
          Length = 1514

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
 Frame = -1

Query: 338 GRRRAKASGHQ-WGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAESPGE-----RRS 177
           GR  +   G +  G P P GA PS SG+  +  Q+ +   P  +NG  +P E      R 
Sbjct: 657 GRDSSSGDGSEACGHPEPRGA-PSTSGESASDLQRTQLLPPCPLNGEHTPAEAAMPRARR 715

Query: 176 RTAAGERASEQC 141
             +A  R  E C
Sbjct: 716 EDSASLRKEESC 727

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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 30/108 (27%), Positives = 44/108 (40%)
 Frame = +1

Query: 4   AKHTPKRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRLR 183
           A+  P+R ++ S    DQ E    ++    G +    +  Q+  +  C   R   A R R
Sbjct: 34  ARPGPQRFLRRSVVESDQEEPPGLEAAEAPGPQPP--QPLQRRVLLLCKTRRL-IAERAR 90

Query: 184 RSPGDSAPFTCLGISSLCCCAVVPRSPLTLGPAPVGVGEPH*CPLAFA 327
             P   AP      ++L      P +P   GP PVG  EP   P+A A
Sbjct: 91  GRPAAPAP------AALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAA 132

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>GSK3H_DROME (P83101) Putative glycogen synthase kinase-3 homolog (EC 2.7.11.26)|
           (GSK-3) (Protein gasket)
          Length = 501

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/83 (30%), Positives = 35/83 (42%)
 Frame = +1

Query: 25  RVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSA 204
           R QGS T  + S   R ++ +GE   R+  ED+Q+      S +  P+   L   PG   
Sbjct: 358 RAQGSSTTKEPSAAHRNRNTAGEESPRK-TEDSQKPATAALSKSPGPSGKALESPPGFLQ 416

Query: 205 PFTCLGISSLCCCAVVPRSPLTL 273
               LG         +P  PLTL
Sbjct: 417 --HDLGNGDHVAVGTMPMEPLTL 437

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>CWC25_CRYNE (Q5KIP8) Pre-mRNA-splicing factor CWC25|
          Length = 434

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIP 219
           RR+      S      K  G++WGS  P G   S   D G   +Q+ D IP
Sbjct: 269 RRRNDTTRGSFDESPRKGGGNRWGSHGPDGYRRSDHRDDGFRERQRGDRIP 319

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>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6) (ST-B17)
          Length = 436

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 158 ARPPPCGSDAPPGTPRHSPA---WESHLSAAAPWS 253
           ++P  C  + PPGTPRH P    W + LS    WS
Sbjct: 392 SQPSFCCLERPPGTPRHPPGPPLWSTSLSQTL-WS 425

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>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/81 (27%), Positives = 32/81 (39%)
 Frame = -2

Query: 472 RATKRQTRTXXXXXXXXXXXXXXXXXRTTPSLLSAASGAPILTPSAAGARRQADISGARR 293
           + TK  +++                  +T S  SA + A    P  A  ++  D + ARR
Sbjct: 174 KPTKLASKSATSAKAGCSTITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQNKARR 233

Query: 292 HPRALVPASVATSGPRRSSRE 230
              A  P+      PRRSSRE
Sbjct: 234 SRSASSPS------PRRSSRE 248

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>FZD9_MOUSE (Q9R216) Frizzled 9 precursor (Frizzled-9) (Fz-9) (mFz9) (mFz3)|
          Length = 592

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 106 EIDEDAQQNPI-PHCSLARSPAAVRLRRSPGDSAP 207
           E  E+A   P  PH  L   P A R  R PGDSAP
Sbjct: 155 EAPENATAGPTEPHKGLGMLPVAPRPARPPGDSAP 189

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>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = +3

Query: 261 ATDAGTSARGCRRAPLMSACLRAPAADGVSIGAPLAA 371
           A   GT+A    RAP  S   RAPAAD    GAP  A
Sbjct: 548 AAATGTAAAISTRAPTPSPAGRAPAADPRRAGAPALA 584

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>PIGO_MOUSE (Q9JJI6) Phosphatidylinositol-glycan biosynthesis, class O protein|
           (PIG-O)
          Length = 1093

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 27/87 (31%), Positives = 31/87 (35%), Gaps = 9/87 (10%)
 Frame = +2

Query: 134 QYHTARSLARPPPC-----GSDAPPGTPRHSPAWESHLSAA----APWSRGRH*RWDQRP 286
           Q H    L  P P      GS AP   PRHS A    L          +   H   ++ P
Sbjct: 588 QLHWEGQLLPPKPLTMSRLGSSAPTAPPRHSGAHALWLGIGLLLFTRLAGLFHRCPEETP 647

Query: 287 WVSASPTDVRLPSRAGGRRSKYWRSAC 367
              +SP    L S  GGR    W  AC
Sbjct: 648 ACRSSPWLSPLASMVGGRAKNLWYGAC 674

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>CNRC_RALME (P37974) Nickel and cobalt resistance protein cnrC precursor|
          Length = 418

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 166 AAVRLRRSPGDSAPFTCLGISSLCCCAVVPRSPLTLGPAP 285
           A  RL    G S P+T +  S L   AVVP +P  L  +P
Sbjct: 206 ALARLSAMSGASEPYTAVTSSLLTTQAVVPNAPAALAESP 245

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>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2|
          Length = 883

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
 Frame = -1

Query: 377 PLRRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQV---N 207
           P ++    +T +     A+ +     +PTP G  P+V+ + G       DE PR +    
Sbjct: 179 PAKKPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAAEAG-----DDDEAPRMIRRPG 233

Query: 206 GAESPGERRSRTAAGERASEQCG 138
           G   P     + AA   AS+Q G
Sbjct: 234 GPARPAPPPKQPAAKPGASKQRG 256

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>HDAC7_MOUSE (Q8C2B3) Histone deacetylase 7a (HD7a)|
          Length = 938

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 23/74 (31%), Positives = 34/74 (45%)
 Frame = -1

Query: 377 PLRRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAE 198
           PL RK SA   S+ RR A+  G    S + T A        G ++    +  P    G+E
Sbjct: 198 PLLRKESAPP-SLRRRPAETLGDSSPSSSSTPAS-------GCSSPNDSEHGPNPALGSE 249

Query: 197 SPGERRSRTAAGER 156
           + G+RR+ +  G R
Sbjct: 250 ADGDRRTHSTLGPR 263

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>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint|
           with forkhead and RING finger domains protein)
          Length = 664

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 377 PLRRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGD 258
           P     S      GR R+ + G   G  +P G+GPSV+ D
Sbjct: 186 PTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASD 225

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>SNUT3_BRARE (Q6DH74) U4/U6.U5 tri-snRNP-associated protein 3|
          Length = 158

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 13  TPKRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSP 165
           TP RR +  ++R    + +RR+ E    R R+ D    ++  PH   +RSP
Sbjct: 8   TPPRR-ERRRSRSSSRDRERRRRERERSRSRDRDRRRSRSRSPHRRRSRSP 57

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>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +2

Query: 155  LARPPPCGSDAPPGTPRHSPAWE----SHLSAAAPWSR 256
            L  P P G+  PPG P  SP+ E    SH    AP S+
Sbjct: 1116 LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQ 1153

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>UPK3B_HUMAN (Q9BT76) Uroplakin-3B precursor (Uroplakin IIIb) (UPIIIb) (p35)|
          Length = 320

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 167 PPCGSDAP-PGTPRHSPAWESHLSAAAPWSRGRH 265
           P C +  P PG  R  P    HL+ AA W   RH
Sbjct: 196 PFCNAPLPGPGPYREDPRIHRHLARAAKWQHDRH 229

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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
 Frame = +2

Query: 161 RPP-PCGSDAPPGTPRHSPAWESHLSAAAPWSRGRH*RWDQRPWVSASPTDVR-LPSRAG 334
           RPP P G  APP  P H+P     +     W         QR  +S  PT  R  PS AG
Sbjct: 255 RPPAPSGDTAPPARP-HTPLSRIDVRPPLDWG-------PQRQTLSRPPTPRRGPPSEAG 306

Query: 335 G----RRSKYW 355
           G    R  ++W
Sbjct: 307 GGKPPRSPQHW 317

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>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2|
          Length = 876

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +1

Query: 1   KAKHTPKRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRL 180
           K     +++  G Q   D S + + +   G+G K E  ED+++        A+  +  R 
Sbjct: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKE-------AKKSSKKRN 353

Query: 181 RRSPGDSA 204
           R+  GD +
Sbjct: 354 RKHSGDDS 361

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>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1002

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = +1

Query: 13  TPKRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRLRRSP 192
           T +   + + +  ++ +NQ  + E GE  + E +E A  + +   + A +PAA     +P
Sbjct: 337 TNEETQESTASHENEDQNQGEEEEEGEEEEEEEEERAHVHEVAKSTPAATPAAT---PTP 393

Query: 193 GDSAPFTCLGISSLCC 240
             ++P      S +CC
Sbjct: 394 SSASPNKKDLRSPICC 409

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>SSPO_BOVIN (P98167) SCO-spondin (Fragment)|
          Length = 867

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 22/73 (30%), Positives = 27/73 (36%)
 Frame = +2

Query: 149 RSLARPPPCGSDAPPGTPRHSPAWESHLSAAAPWSRGRH*RWDQRPWVSASPTDVRLPSR 328
           R L RPP  G   PP   R  P +      A  W+           W +  P  V   S 
Sbjct: 786 RELLRPPLPGGSCPPDRLRSQPCFVQACPVAGAWAE----------WEAWGPCSV---SC 832

Query: 329 AGGRRSKYWRSAC 367
            GG RS+  R +C
Sbjct: 833 GGGHRSR--RRSC 843

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>GRPE2_STRAW (Q826F5) Protein grpE 2 (HSP-70 cofactor 2)|
          Length = 203

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 302 GSPTPTGAGPSVSGDLGTTA-QQQRDEIPRQVNGAESPGERRSRTAAGERASEQ 144
           G P P  AGP+ + D  TTA Q+  D   R +   ++  +R +R    ERA E+
Sbjct: 45  GEPGPDAAGPAPAEDEYTTAIQELEDRWRRTLADLDNLRKRHARELERERAVER 98

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>PSAB_PROMA (Q9RDV0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
          Length = 747

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 209 SPAWESHL-SAAAPWSRGRH*RWDQRPWVSASP 304
           S AW  HL   A P SRG+H  WD   W+S  P
Sbjct: 187 SIAWTGHLVHVAIPESRGQHVGWDN--WLSVLP 217

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>SUV92_MOUSE (Q9EQQ0) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2)
           (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog
           2) (Su(var)3-9 homolog 2)
          Length = 477

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 329 RAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAESPGERRSRTAAGER 156
           RAKA G + G+      GP        TA+++R         AE+   RRSR +AGER
Sbjct: 5   RAKARGSEAGARCHRAPGPPPRPKARRTARRRR---------AETLTARRSRPSAGER 53

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>ADA2B_DIDMA (O77715) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 382

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = -1

Query: 347 YSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPR--QVNG-AESPGERRS 177
           Y + +RR +   H   +P     GPS  G   T ++     +P   + NG ++ PGER  
Sbjct: 183 YLIAKRRNRQGPHGKQAPGDGDTGPSALGGTSTISKLPPSILPAVGEANGHSKPPGEREG 242

Query: 176 RTAAGERAS 150
               G+  S
Sbjct: 243 GEQMGDPTS 251

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>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein|
          Length = 1729

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = -2

Query: 373 SAASGAPILTPSAAGARRQADISGARRHPRALVPASVATSGPRRSS 236
           S AS  P +TPSA  A    +  G+R  P   +PA  A   PR SS
Sbjct: 326 SQASPCPAVTPSAPSAALPDE--GSRHTPSPGLPAEGAPEAPRPSS 369

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>ANR18_HUMAN (Q8IVF6) Ankyrin repeat domain-containing protein 18A|
          Length = 992

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 1   KAKHTPKRRVQGSQTRLDQSENQRRQSESGEGRKRE 108
           KA+H  K   +  Q RL +SEN++ Q     G+K++
Sbjct: 287 KAEHNLKVASEEKQERLQRSENKQPQDSQSYGKKKD 322

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>UPPS_XANOR (Q5H1E5) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 258

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 336 PPAREGKRTSVGLADTHGRWSQRQWRPRDHGAAA 235
           PP  +  R    + D +GRW+QR+ RPR  G  A
Sbjct: 10  PPVADVPRHIAIIMDGNGRWAQRRRRPRVIGHRA 43

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>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = -1

Query: 326 AKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAESPGERRSRTAAGERASE 147
           + +S     +PTP GA  S +G   ++A          + G +       R A+G R   
Sbjct: 560 SSSSASSSSAPTPAGAASSAAGAASSSASASSGGAVGALGGRQEETSLGPRAASGPRGPR 619

Query: 146 QC 141
           +C
Sbjct: 620 KC 621

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>TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP) (AR1)
          Length = 1960

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -1

Query: 377 PLRRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAE 198
           P +R+ S    S G  +  + G+Q+GS    G   +    LG  +  Q+D       G  
Sbjct: 106 PPQRRPSGPVQSYGPPQGSSFGNQYGSEGHVGQFQAQHSGLGGVSHYQQD-----YTGPF 160

Query: 197 SPGERRSRTAAGERASEQ 144
           SPG  + +  A  +  +Q
Sbjct: 161 SPGSAQYQQQASSQQQQQ 178

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>PUR2_MOUSE (Q64737) Trifunctional purine biosynthetic protein adenosine-3|
           [Includes: Phosphoribosylamine--glycine ligase (EC
           6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase);
           Phosphoribosylformylglycinamidin
          Length = 1010

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 356 ANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDL 255
           +N +S+ R+  + S  Q+ SP P G G    GDL
Sbjct: 621 SNGFSLVRKIVERSSLQYSSPAPGGCGDQTLGDL 654

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>MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 286

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 353 NTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT 249
           N Y++  RR+        +PTPTGAG   SG  G+
Sbjct: 33  NAYNMSIRRSMTESK---TPTPTGAGAGASGSAGS 64

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>AT10B_HUMAN (O94823) Probable phospholipid-transporting ATPase VB (EC 3.6.3.1)|
          Length = 1461

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 377 PLRRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDL 255
           PLRR +SA     G  R ++ GH+  S  P     S+  D+
Sbjct: 504 PLRRSQSARVPIQGHYRQRSMGHRESSQPPVAFSSSIEKDV 544

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>PSAB_MESVI (Q9MUR7) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 209 SPAWESHL-SAAAPWSRGRH*RWD 277
           S AW  HL   A P SRG+H RWD
Sbjct: 187 SLAWTGHLIHVAIPESRGQHVRWD 210

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>PSAB_HUPLU (Q5SD11) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 209 SPAWESHL-SAAAPWSRGRH*RWDQRPWVSASPTDVRLPSRAGGRRSKYWRSA 364
           S AW  HL   A P SRG H RWD    ++A P    L     G+ S Y ++A
Sbjct: 187 SLAWTGHLVHVAIPESRGEHVRWDN--LLTALPHPQGLGPFFAGQWSVYAQNA 237

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>IWS1_XENTR (Q505H7) IWS1-like protein|
          Length = 909

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -1

Query: 332 RRAKASGHQWGSPTPTGAGPSVSGDLGTTAQQQRDEIPRQVNGAESPGERRSRTAAGERA 153
           RR K S  + GSP    A  S    +  +A    D+ PR+    +S  ER  +  A +  
Sbjct: 116 RRQKGSDSE-GSPVKDAASDSDEEPIRHSASDSEDDGPRKEQANDSEDERHKKNTASDSE 174

Query: 152 SE 147
            E
Sbjct: 175 DE 176

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>NAC2_CHLRE (Q9LEM8) PsbD mRNA maturation factor Nac2, chloroplast precursor|
          Length = 1385

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -3

Query: 336  PPAREGK-RTSVGLADTHGRWSQRQWRPRDHGAAAER*DSQAGEWRGVPGGASEPHGGGR 160
            PPA   + R +  L    G W + +WR R +G+A     + A E     GG +   GGG 
Sbjct: 894  PPAPSARPRHNWLLVQALGNWGKHEWRLRMYGSARHLFRAAADEAARHSGGLAA--GGGG 951

Query: 159  ASERAVWYW 133
            A    + YW
Sbjct: 952  A---VMHYW 957

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>THIC_METKA (Q8TZ33) Thiamine biosynthesis protein thiC|
          Length = 429

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = +1

Query: 34  GSQTRLDQSENQRRQSESGE--GRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSAP 207
           GS    + +   R     GE   R RE    A      H  L + PA VRL++   D AP
Sbjct: 231 GSVLDANDAAQHRELVVQGELVDRCREAGVQAMVEGPGHVPLDQIPAVVRLQKRVCDGAP 290

Query: 208 FTCLG 222
           F  LG
Sbjct: 291 FYVLG 295

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>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT----TAQQQRDEIPRQVNG 204
           R++RSA++ S   R   +S    GS T TG+    S    +    ++   R       +G
Sbjct: 63  RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122

Query: 203 AESPGERR 180
           + SP  RR
Sbjct: 123 SPSPSRRR 130

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>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT----TAQQQRDEIPRQVNG 204
           R++RSA++ S   R   +S    GS T TG+    S    +    ++   R       +G
Sbjct: 63  RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122

Query: 203 AESPGERR 180
           + SP  RR
Sbjct: 123 SPSPSRRR 130

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>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT----TAQQQRDEIPRQVNG 204
           R++RSA++ S   R   +S    GS T TG+    S    +    ++   R       +G
Sbjct: 63  RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122

Query: 203 AESPGERR 180
           + SP  RR
Sbjct: 123 SPSPSRRR 130

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>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT----TAQQQRDEIPRQVNG 204
           R++RSA++ S   R   +S    GS T TG+    S    +    ++   R       +G
Sbjct: 63  RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122

Query: 203 AESPGERR 180
           + SP  RR
Sbjct: 123 SPSPSRRR 130

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>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = -1

Query: 371 RRKRSANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDLGT----TAQQQRDEIPRQVNG 204
           R++RSA++ S   R   +S    GS T TG+    S    +    ++   R       +G
Sbjct: 63  RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122

Query: 203 AESPGERR 180
           + SP  RR
Sbjct: 123 SPSPSRRR 130

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>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3|
           subunit 10 (eIF-3 theta) (eIF3a) (Egg-laying defective
           protein 45)
          Length = 1076

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 19  KRRVQGSQTRLDQSENQRRQSESGEGRKREIDEDAQQN 132
           K+R +  + RL   E QRRQ   G GR+   +  A Q+
Sbjct: 827 KKREEEERARLQVIEGQRRQHNDGRGRREMENSVAMQD 864

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>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +2

Query: 149 RSLARPPPCGSDAPPGTPRHSPAW--ESHLSAAAPWSRGRH 265
           R+  RPPP     P  TP H+P W   +   AA P   G H
Sbjct: 62  RAATRPPPL----PAHTPAHTPEWCGAASAEAAEPRRAGPH 98

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>YD186_YEAST (P48568) Hypothetical 32.2 kDa protein in PPH22-VMA1 intergenic|
           region
          Length = 277

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 43  TRLDQSENQRRQSESGEGRKREIDEDAQQNPIP 141
           TR  Q+  +R+  E G+G +  I  D   NPIP
Sbjct: 191 TRTKQNPAERKVIEIGDGEELSIYRDVYSNPIP 223

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>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific|
           homeobox protein 1)
          Length = 418

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +3

Query: 249 GPEVATDAGTSARGCRRAPLMSACLR-----APAADGVSIGAPLAAERRDGVV 392
           GP   ++   SARG RR P  SA  R     AP   G S G P AA   D ++
Sbjct: 39  GPRARSEPCVSARGARRGP-GSAMQRAAGGGAPGGSGGSSGGPGAAFSIDSLI 90

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>PUR2_HUMAN (P22102) Trifunctional purine biosynthetic protein adenosine-3|
           [Includes: Phosphoribosylamine--glycine ligase (EC
           6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase);
           Phosphoribosylformylglycinamidin
          Length = 1010

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 356 ANTYSVGRRRAKASGHQWGSPTPTGAGPSVSGDL 255
           +N +S+ R+    S  Q+ SP P G G    GDL
Sbjct: 621 SNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDL 654

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>TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)|
          Length = 414

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -1

Query: 329 RAKASGHQWGSPTPTG---AGPSVSGDLGTTAQQQRDEIPRQVNGAESPGERRSRTAAGE 159
           R   +G + G+ T  G   A PS  G    +A +  D    Q NG +  GE R    AG+
Sbjct: 74  RVPVAGSRGGAATKAGQEDAPPSTKGLEAASAAEAADS--SQKNGCQL-GEPRG--PAGQ 128

Query: 158 RASEQCGIG 132
           +A E CG G
Sbjct: 129 KALEACGAG 137

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>PSAB_MARPO (P06408) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 209 SPAWESHL-SAAAPWSRGRH*RWD 277
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWTGHLVHVAIPESRGEHVRWD 210

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>PSAB_ANTFO (Q85AV8) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 209 SPAWESHL-SAAAPWSRGRH*RWD 277
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWAGHLIHVAIPESRGEHVRWD 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,041,472
Number of Sequences: 219361
Number of extensions: 1188272
Number of successful extensions: 6892
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6750
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result