>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete
              sequence
          Length = 215657

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 326    tagacccttccctggcttctgctacagag 354
              |||||||||||||| ||||||||||||||
Sbjct: 128233 tagacccttccctgccttctgctacagag 128261

>emb|AL392044.7| Human DNA sequence from clone RP11-195E11 on chromosome 9 Contains the
             5' end of a novel gene (MGC21981), three novel genes and a
             CpG island, complete sequence
          Length = 167206

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 354   gtggaaattgaattttcggtgttc 377
             ||||||||||||||||||||||||
Sbjct: 75322 gtggaaattgaattttcggtgttc 75299

>gb|AF165139.6| Homo sapiens chromosome 9 clone RP11-44L18 map unmapped, complete
             sequence
          Length = 153942

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 354   gtggaaattgaattttcggtgttc 377
             ||||||||||||||||||||||||
Sbjct: 27683 gtggaaattgaattttcggtgttc 27706

>gb|AF052290.1|AF052290 Synechococcus PCC7002 succinate dehydrogenase iron-sulfur protein
           subunit (sdhB), ycf4 gene, peptidyl-prolyl cis-trans
           isomerase B (ppiB), ycf36 gene, putative c-type
           cytochrome biogenesis protein (ccdA), and c-type
           cytochrome biogenesis protein (ycf44) genes, complete
           cds; and unknown genes
          Length = 7369

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 149 tccggtgattaaggatttggtgg 171
           |||||||||||||||||||||||
Sbjct: 371 tccggtgattaaggatttggtgg 393

>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 175     aggcggcaggaggctcaggcggcgcg 200
               |||||||||||||| |||||||||||
Sbjct: 1096313 aggcggcaggaggcgcaggcggcgcg 1096288

>gb|U91929.1|MMU91929 Mus musculus L1 neural cell adhesion protein gene, 5' sequence and exon
             1
          Length = 12496

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tcttagacccttccctggctt 343
             |||||||||||||||||||||
Sbjct: 10044 tcttagacccttccctggctt 10064

>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9,
              MGSPI-15528, MGSPI-15530 complete sequence
          Length = 235497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tcttagacccttccctggctt 343
              |||||||||||||||||||||
Sbjct: 148227 tcttagacccttccctggctt 148207

>ref|XM_881112.1| PREDICTED: Bos taurus similar to rosbin, round spermatid basic
           protein 1, transcript variant 5 (LOC508231), mRNA
          Length = 3222

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 tggtggcggaggcggcaggag 186
           |||||||||||||||||||||
Sbjct: 566 tggtggcggaggcggcaggag 546

>ref|XM_584981.2| PREDICTED: Bos taurus similar to rosbin, round spermatid basic
           protein 1, transcript variant 1 (LOC508231), mRNA
          Length = 4835

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 tggtggcggaggcggcaggag 186
           |||||||||||||||||||||
Sbjct: 319 tggtggcggaggcggcaggag 299

>ref|XM_881065.1| PREDICTED: Bos taurus similar to rosbin, round spermatid basic
           protein 1, transcript variant 3 (LOC508231), mRNA
          Length = 1635

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 tggtggcggaggcggcaggag 186
           |||||||||||||||||||||
Sbjct: 566 tggtggcggaggcggcaggag 546

>ref|XM_867943.1| PREDICTED: Bos taurus similar to rosbin, round spermatid basic
           protein 1, transcript variant 2 (LOC508231), mRNA
          Length = 6757

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 tggtggcggaggcggcaggag 186
           |||||||||||||||||||||
Sbjct: 566 tggtggcggaggcggcaggag 546

>ref|XM_381488.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01312.1)
            partial mRNA
          Length = 5766

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   actcttccagtctgtcgcatc 53
            |||||||||||||||||||||
Sbjct: 4124 actcttccagtctgtcgcatc 4144

>emb|BX936313.8| Zebrafish DNA sequence from clone CH211-106J16 in linkage group 3,
             complete sequence
          Length = 78174

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    cggagagaagacttattttca 105
             |||||||||||||||||||||
Sbjct: 61223 cggagagaagacttattttca 61203

>gb|AC061992.11| Homo sapiens chromosome 17, clone RP11-806H10, complete sequence
          Length = 100190

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 448   gtgcctgatggaagagccagc 468
             |||||||||||||||||||||
Sbjct: 79578 gtgcctgatggaagagccagc 79558

>emb|AL672094.11| Mouse DNA sequence from clone RP23-373N8 on chromosome X, complete
              sequence
          Length = 147138

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    tcttagacccttccctggctt 343
              |||||||||||||||||||||
Sbjct: 136983 tcttagacccttccctggctt 136963

>gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, complete sequence
          Length = 169477

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    gagaagacttattttcattt 108
             ||||||||||||||||||||
Sbjct: 75451 gagaagacttattttcattt 75432

>gb|AC126251.4| Mus musculus BAC clone RP23-457L16 from chromosome 14, complete sequence
          Length = 181355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    agacccttccctggcttctg 346
              ||||||||||||||||||||
Sbjct: 161210 agacccttccctggcttctg 161191

>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete
             sequence
          Length = 178742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   agacccttccctggcttctg 346
             ||||||||||||||||||||
Sbjct: 37007 agacccttccctggcttctg 36988

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 177     gcggcaggaggctcaggcggcgcg 200
               |||||||||||| |||||||||||
Sbjct: 1877746 gcggcaggaggcgcaggcggcgcg 1877723

>gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 171451

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    attttcatttccaatccaat 118
             ||||||||||||||||||||
Sbjct: 41851 attttcatttccaatccaat 41832

>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     attttcatttccaatccaat 118
              ||||||||||||||||||||
Sbjct: 137831 attttcatttccaatccaat 137812

>gb|AC025452.5| Homo sapiens chromosome 5 clone CTD-2145D4, complete sequence
          Length = 170195

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    aaattataatgattcttaga 329
              ||||||||||||||||||||
Sbjct: 121959 aaattataatgattcttaga 121978

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                   
Query: 166      tggtggcggaggcggca--ggaggctcaggcggcg 198
                |||||||||||||||||  ||| ||||||||||||
Sbjct: 27158901 tggtggcggaggcggcattggatgctcaggcggcg 27158935

>dbj|AK071957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M02, full
           insert sequence
          Length = 3542

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                              
Query: 166 tggtggcggaggcggca--ggaggctcaggcggcg 198
           |||||||||||||||||  ||| ||||||||||||
Sbjct: 280 tggtggcggaggcggcattggatgctcaggcggcg 314

>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
              sequence
          Length = 304419

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     attttcatttccaatccaat 118
              ||||||||||||||||||||
Sbjct: 186450 attttcatttccaatccaat 186431

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 218     gcaagcggatgcgccgcgtcggatccgc 245
               |||||||||||||||||| || ||||||
Sbjct: 2775593 gcaagcggatgcgccgcggcgcatccgc 2775566

>gb|AC005685.1|AC005685 Homo sapiens clone UWGC:g1397a149 from 7p14-15, complete sequence
          Length = 42648

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   gacaagggaagggcttcaaagaag 417
             |||||||||||| |||||||||||
Sbjct: 26024 gacaagggaaggccttcaaagaag 26001

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                   
Query: 166      tggtggcggaggcggca--ggaggctcaggcggcg 198
                |||||||||||||||||  ||| ||||||||||||
Sbjct: 27084501 tggtggcggaggcggcattggatgctcaggcggcg 27084535

>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                
Query: 166   tggtggcggaggcggca--ggaggctcaggcggcg 198
             |||||||||||||||||  ||| ||||||||||||
Sbjct: 97800 tggtggcggaggcggcattggatgctcaggcggcg 97834


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,456,326
Number of Sequences: 3902068
Number of extensions: 4456326
Number of successful extensions: 90639
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 90497
Number of HSP's gapped (non-prelim): 146
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)