Clone Name | bastl08d12 |
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Clone Library Name | barley_pub |
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/25 (80%), Positives = 23/25 (92%) Frame = +2 Query: 383 TNWEADKMLDVYIYDYFVKRNLQET 457 TNWEADKMLDVYI+DY VKR+L+ T Sbjct: 4 TNWEADKMLDVYIHDYLVKRDLKAT 28
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 32.3 bits (72), Expect = 0.59 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 56 PLSPPVPPFQTHPTFSSRLPPPSHP 130 P PP PP + P ++S LPPP P Sbjct: 543 PAPPPPPPLPSGPAYASALPPPPGP 567
>YQKA_SCHPO (O74522) Protein C1494.10 in chromosome III| Length = 964 Score = 32.0 bits (71), Expect = 0.78 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 386 NWEADKMLDVYIYDYFVKRNLQE 454 N ++ LD YIYDYFVK N +E Sbjct: 31 NSHPNESLDYYIYDYFVKHNFEE 53
>PRRT1_MOUSE (O35449) Proline-rich transmembrane protein 1| Length = 306 Score = 32.0 bits (71), Expect = 0.78 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTH----PTFSSRLPPPSHP*GLALAAGR 157 G+PL P C AY P+ P P+ P +S LPPP GLAL R Sbjct: 167 GYPLQLQP---CTAYVPVYPVGTPYAGGTPGGPGVTSTLPPPPQGPGLALLEPR 217
>DNJ11_ARATH (Q9FYB5) Chaperone protein dnaJ 11, chloroplast precursor (AtJ11)| (AtDjC11) Length = 161 Score = 32.0 bits (71), Expect = 0.78 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 17 LHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRDT-RAHR-PRRLR 190 L SSPTS + + SPP+ P + P+ ++R+ PP + D+ R H+ PRRL Sbjct: 2 LSSSPTSFTHPFLSSSPPLSPI-SPPSRTARISPPLVSASCSYTYTEDSPRLHQIPRRLT 60 Query: 191 GASAS 205 AS Sbjct: 61 TVPAS 65
>SPN90_HUMAN (Q9NZQ3) SH3 adapter protein SPIN90 (NCK-interacting protein with| SH3 domain) (SH3 protein interacting with Nck, 90 kDa) (VacA-interacting protein, 54 kDa) (VIP54) (AF3p21) (Diaphanous protein-interacting protein) (Dia-interacting protein 1) Length = 722 Score = 32.0 bits (71), Expect = 0.78 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +2 Query: 23 SSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPS 124 SSP+ + +P PPVP TH T S PPPS Sbjct: 230 SSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPS 263
>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 414 Score = 31.6 bits (70), Expect = 1.0 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 16/81 (19%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*G----------------L 139 G P ++ T+L + P PP PP PT S+ PPP P G Sbjct: 165 GHPSSAASTTLSCS-GPPPPPPPPVPPPPTGSTPPPPPPLPAGGAQGTNHDESSASGLAA 223 Query: 140 ALAAGRDTRAHRPRRLRGASA 202 ALA + R RP G S+ Sbjct: 224 ALAGAKLRRVQRPEDASGGSS 244
>CCD95_RAT (Q6AYH2) Coiled-coil domain-containing protein 95| Length = 244 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRDTRAHRPRRL 187 GFPL +S Y + SPP PPF + + +LP PS L + R PR+L Sbjct: 117 GFPLQTSGAPSPYLSSLASPPYPPFPS-DYLALQLPEPS-----PLRPKLEKRPRLPRKL 170 Query: 188 RGA 196 + A Sbjct: 171 KMA 173
>RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 346 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = +2 Query: 5 FGFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRL-----PPPSHP*G 136 FG P S P S Y P PP PPF P L PPPS+P G Sbjct: 263 FGPPAQSLPAS----YTP-PPPPPPFLNSPPLGPGLQPLAPPPPSYPCG 306
>TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box protein 1)| (Testis-specific T-box protein) Length = 398 Score = 31.2 bits (69), Expect = 1.3 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 5/71 (7%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRL-----PPPSHP*GLALAAGRDTRAH 172 GFP +SP + Y P PP PP + P ++ PPP H A AAG T A Sbjct: 26 GFPGAASPGA--DPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATSAA 83 Query: 173 RPRRLRGASAS 205 GAS + Sbjct: 84 AEPEGPGASCA 94
>CCD95_BOVIN (Q29RS4) Coiled-coil domain-containing protein 95| Length = 244 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRDTRAHRPRRL 187 GFPL +S Y + SP PPF + + +LP PS L R+ R PR+L Sbjct: 117 GFPLQASRAPSPYLSSLASPTYPPFPS-DYLALQLPEPS-----PLRPKREKRPRLPRKL 170 Query: 188 RGA 196 + A Sbjct: 171 KMA 173
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/61 (31%), Positives = 25/61 (40%) Frame = +2 Query: 23 SSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRDTRAHRPRRLRGASA 202 ++PT +P SPP PP Q + + PPP P PRR RG A Sbjct: 2810 AAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTP---------------PRRHRGLQA 2854 Query: 203 S 205 + Sbjct: 2855 A 2855
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 17 LHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP 130 LH +P++ +APL PP PP Q P + P + P Sbjct: 455 LHPAPSTAPGPHAPLMPPSPPSQVLPASEPKRHPSTLP 492
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +2 Query: 56 PLSPPVPPFQTHPTFSSRLPPPSHP 130 P SPPVPP P S +PPP P Sbjct: 147 PESPPVPPGSYMPPSQSYMPPPQPP 171
>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)| Length = 1386 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +2 Query: 56 PLSPPVPPFQTHPTFSSRLPPPSHP 130 P SPPVPP P S +PPP P Sbjct: 148 PESPPVPPGSYMPPSQSYMPPPQPP 172
>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) Length = 1865 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Frame = +2 Query: 53 APLSPPVPPFQTH--PTFSSRLPPPSHP 130 +P PP PP Q H P S+ PPP P Sbjct: 1823 SPTPPPPPPHQRHLPPPLPSKTPPPPPP 1850
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 7/73 (9%) Frame = +2 Query: 5 FGFPLHSSPTSLCYAYAPLSPPVPPFQTHP--TFSSRLPPPSHP*GLALAAGRD-----T 163 FGFP S S A++PL+ P P ++ P + S L PPS L+L G Sbjct: 755 FGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQ--LSLRTGPFQPPFLP 812 Query: 164 RAHRPRRLRGASA 202 A RPR L+ + A Sbjct: 813 PARRPRSLQESPA 825
>SPN90_MOUSE (Q9ESJ4) SH3 adapter protein SPIN90 (NCK-interacting protein with| SH3 domain) (SH3 protein interacting with Nck, 90 kDa) (VacA-interacting protein, 54 kDa) (VIP54) (N-WASP-interacting protein, 90kDa) (Wiskott-Aldrich syndrome protein-binding Length = 714 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +2 Query: 23 SSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPS 124 SSP+ L + +P PPVP H T S P PS Sbjct: 223 SSPSELGPSCSPTPPPVPRRGAHTTVSQPQPSPS 256
>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1| Length = 306 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPT----FSSRLPPPSHP*GLALAAGR 157 G+PL P C AY P+ P P+ +S LPPP GLAL R Sbjct: 167 GYPLQLQP---CTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPR 217
>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 393 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 16/65 (24%) Frame = +2 Query: 56 PLSPPVPPFQTHPTFSSRLPPPSHP*G----------------LALAAGRDTRAHRPRRL 187 P PP PP PT S+ PPP P G ALA + R RP Sbjct: 180 PPPPPPPPVPPPPTGSTPPPPPPLPAGGAQGTNHDESSASGLAAALAGAKLRRVQRPEDA 239 Query: 188 RGASA 202 G S+ Sbjct: 240 SGGSS 244
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/67 (29%), Positives = 24/67 (35%) Frame = +2 Query: 137 LALAAGRDTRAHRPRRLRGASASXXXXXXXXXXXXXXXXXXXGGKDHPGRAPFPWAPPDF 316 LA AA +D + + R SA G K G P P APP Sbjct: 1184 LAAAAAKDIKLNGQRSSLEHSAGSSSCSKDGERDDAYPSSLHGRKSEGGGTPAPPAPPSG 1243 Query: 317 LGCGAGS 337 G GAG+ Sbjct: 1244 PGTGAGA 1250
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 29.3 bits (64), Expect = 5.0 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +2 Query: 17 LHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP 130 LH +P++ + PL PP PP Q P + P + P Sbjct: 455 LHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLP 492
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/41 (34%), Positives = 16/41 (39%) Frame = +2 Query: 8 GFPLHSSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP 130 G P P P P P F HP F++ PPP P Sbjct: 331 GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP 371
>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 765 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 348 DMAPLPAPQPRKSGGAHGKGARPGWSFPP 262 D A AP PR S G+H AR G PP Sbjct: 649 DQASSNAPGPRPSSGSHRSPARQGLPSPP 677
>ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) (Zinc finger protein 378) Length = 765 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 348 DMAPLPAPQPRKSGGAHGKGARPGWSFPP 262 D A AP PR S G+H AR G PP Sbjct: 649 DQASSNAPGPRPSSGSHRSPARQGLPSPP 677
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 65 PPVPPFQTHPTFSSRLPPPSHP 130 PP PP HP +S+ PP S P Sbjct: 199 PPPPPTSQHPQPASQAPPQSQP 220
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 10/46 (21%) Frame = +2 Query: 14 PLHSSPTSLCYAYAPLSPPVP----------PFQTHPTFSSRLPPP 121 PL P + PLSPP P P T PT S LPPP Sbjct: 1755 PLPRPPIAFTTFPLPLSPPNPPPPQLVTFSLPISTPPTSSLPLPPP 1800
>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression| inhibition of growth A) Length = 1790 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +2 Query: 47 AYAPLSPPVPPFQTHPTFSSRLPPPSHP 130 A A PP PP HP S PPP P Sbjct: 1012 ATAAPPPPPPPPPAHPGLSGAAPPPPPP 1039
>YHY5_SCHPO (O60154) Hypothetical protein C19C7.05 in chromosome II| Length = 150 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +2 Query: 29 PTSLCYAYAPLSPP-VPPFQTHPTFSSRLPPPSHP 130 P S Y P PP VP ++T SS PPP++P Sbjct: 100 PMSQAYRPPPTEPPTVPAYET----SSEFPPPAYP 130
>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 422 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 23 SSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRD 160 S+P S P PPVPP PT ++ PPP P G A + D Sbjct: 180 SAPVSCSGPPPPPPPPVPP---PPTGATPPPPPPLPAGGAQGSSHD 222
>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 416 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 23 SSPTSLCYAYAPLSPPVPPFQTHPTFSSRLPPPSHP*GLALAAGRD 160 S+P S P PPVPP PT ++ PPP P G A + D Sbjct: 174 SAPVSCSGPPPPPPPPVPP---PPTGATPPPPPPLPAGGAQGSSHD 216
>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing| protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1 ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral sclerosis 2 chromosomal region candidate 9 gene protein) Length = 1302 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 62 SPPVPPFQTHPTFSSRLPPPSHP 130 +PPVPP + P F + PPS P Sbjct: 859 TPPVPPAKKQPAFPASYIPPSPP 881 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,190,771 Number of Sequences: 219361 Number of extensions: 996231 Number of successful extensions: 4372 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3418 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4285 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)