ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
2ref|XM_474777.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
3emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
5emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
6gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromoso... 44 0.38
7gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromoso... 44 0.38
8gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.5
9gb|AC087252.3| Papio anubis clone RP41-265N24, complete sequence 42 1.5
10emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.5
11emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.5
12gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 42 1.5
13gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
14gb|AC124159.3| Macaca mulatta clone CH250-392A16, complete sequence 42 1.5
15emb|BX510908.8| Mouse DNA sequence from clone RP23-264F3 on chro... 42 1.5
16gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, com... 40 5.9
17ref|XM_510647.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.9
18ref|XM_510443.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 40 5.9
19ref|XM_468508.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
20ref|XM_473024.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
21gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.9
22gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 40 5.9
23ref|XM_425261.1| PREDICTED: Gallus gallus similar to phosphoinos... 40 5.9
24gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome ... 40 5.9
25ref|XM_869047.1| PREDICTED: Bos taurus similar to Tetratricopept... 40 5.9
26ref|XM_601426.2| PREDICTED: Bos taurus similar to tumor necrosis... 40 5.9
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.9
28gb|AE008996.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 5.9
29ref|XM_658845.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.9
30gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
32gb|AC096363.8| Rattus norvegicus 1 BAC CH230-54P17 (Children's H... 40 5.9
33gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.9
34gb|DQ015584.1| Uncultured bacterium clone M3_g10_2 16S ribosomal... 40 5.9
35gb|DQ015559.1| Uncultured bacterium clone M3_e09_2 16S ribosomal... 40 5.9
36gb|DQ015550.1| Uncultured bacterium clone M3_d12_2 16S ribosomal... 40 5.9
37gb|DQ015514.1| Uncultured bacterium clone M3_a08_2 16S ribosomal... 40 5.9
38gb|DQ015413.1| Uncultured bacterium clone M3_g08 16S ribosomal R... 40 5.9
39gb|DQ015360.1| Uncultured bacterium clone M3_b06 16S ribosomal R... 40 5.9
40gb|DQ015257.1| Uncultured bacterium clone M2_1c06 16S ribosomal ... 40 5.9
41gb|DQ015103.1| Uncultured bacterium clone M2_d06_1 16S ribosomal... 40 5.9
42gb|AY993407.1| Uncultured bacterium clone C19_I05 16S ribosomal ... 40 5.9
43gb|AY993015.1| Uncultured bacterium clone C22_o16 16S ribosomal ... 40 5.9
44gb|AY992986.1| Uncultured bacterium clone C22_m22 16S ribosomal ... 40 5.9
45gb|AY992956.1| Uncultured bacterium clone C22_k22 16S ribosomal ... 40 5.9
46gb|AY992909.1| Uncultured bacterium clone C22_i04 16S ribosomal ... 40 5.9
47gb|AY992830.1| Uncultured bacterium clone C22_e05 16S ribosomal ... 40 5.9
48gb|AY992789.1| Uncultured bacterium clone C22_b07 16S ribosomal ... 40 5.9
49gb|AY992788.1| Uncultured bacterium clone C22_b05 16S ribosomal ... 40 5.9
50gb|AY992784.1| Uncultured bacterium clone C22_b01 16S ribosomal ... 40 5.9
51gb|AY992649.1| Uncultured bacterium clone C23_m24 16S ribosomal ... 40 5.9
52gb|AY992587.1| Uncultured bacterium clone C23_k07 16S ribosomal ... 40 5.9
53gb|AY992315.1| Uncultured bacterium clone C16_K08 16S ribosomal ... 40 5.9
54gb|AY992303.1| Uncultured bacterium clone C16_I02 16S ribosomal ... 40 5.9
55gb|AY992243.1| Uncultured bacterium clone C16_L11 16S ribosomal ... 40 5.9
56gb|AY992241.1| Uncultured bacterium clone C16_L07 16S ribosomal ... 40 5.9
57gb|AY992218.1| Uncultured bacterium clone C16_H03 16S ribosomal ... 40 5.9
58gb|AY992106.1| Uncultured bacterium clone C17_L041 16S ribosomal... 40 5.9
59gb|AY992103.1| Uncultured bacterium clone C17_J141 16S ribosomal... 40 5.9
60gb|AY991557.1| Uncultured bacterium clone C11_A011 16S ribosomal... 40 5.9
61gb|AY991511.1| Uncultured bacterium clone C10_F04 16S ribosomal ... 40 5.9
62gb|AY990063.1| Uncultured bacterium clone C12_P11 16S ribosomal ... 40 5.9
63emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.9
64emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.9
65emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.9
66emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.9
67emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
68emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
69emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC... 40 5.9
70gb|U29614.1| Caenorhabditis elegans cosmid F18E9, complete sequence 40 5.9
71gb|AY607024.2| Halobiforma lacisalsi bacteriorhodopsin gene, com... 40 5.9
72gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ... 40 5.9
73gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 5.9
74dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
75dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
76dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
77dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
78gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosom... 40 5.9
79dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
80dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
81dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
82dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.9
83dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
84dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
85dbj|AK110673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
86dbj|AK108036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
87emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
88emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
89gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence 40 5.9 
>dbj|AK121164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080I03, full
           insert sequence
          Length = 3393

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 290 catctccgaccgcttcagcttctgcgtctccgacacgcaggaggactggaacggcgcctt 349
           ||||||| |||||||||||||||||||| ||||| ||  |||||| ||||| |  |||||
Sbjct: 251 catctcccaccgcttcagcttctgcgtcgccgacccgacggaggattggaatgaggcctt 310

                       
Query: 350 caactacacctc 361
           ||| ||||||||
Sbjct: 311 caattacacctc 322
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>ref|XM_474777.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2895

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 290 catctccgaccgcttcagcttctgcgtctccgac 323
           ||||||| |||||||||||||||||||| |||||
Sbjct: 150 catctcccaccgcttcagcttctgcgtcgccgac 183
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>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15,
           complete sequence
          Length = 137874

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 290 catctccgaccgcttcagcttctgcgtctccgac 323
           ||||||| |||||||||||||||||||| |||||
Sbjct: 613 catctcccaccgcttcagcttctgcgtcgccgac 580
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 290     catctccgaccgcttcagcttctgcgtctccgac 323
               ||||||| |||||||||||||||||||| |||||
Sbjct: 6446365 catctcccaccgcttcagcttctgcgtcgccgac 6446332



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 29599690 cggcggcgggcgagcgcagc 29599671



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      cgccttcaactacacctccg 363
                ||||||||||||||||||||
Sbjct: 24742792 cgccttcaactacacctccg 24742811



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     cggcggcgggcgagcgcagc 154
               ||||||||||||||||||||
Sbjct: 4477295 cggcggcgggcgagcgcagc 4477314
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>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17,
              complete sequence
          Length = 147548

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 290    catctccgaccgcttcagcttctgcgtctccgac 323
              ||||||| |||||||||||||||||||| |||||
Sbjct: 108514 catctcccaccgcttcagcttctgcgtcgccgac 108481
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>gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromosome 1, complete
             sequence
          Length = 187635

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   cggcggcgggcgagcgcagcct 156
             ||||||||||||||||||||||
Sbjct: 90779 cggcggcgggcgagcgcagcct 90758
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>gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromosome unknown, complete
             sequence
          Length = 172543

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   cggcggcgggcgagcgcagcct 156
             ||||||||||||||||||||||
Sbjct: 90581 cggcggcgggcgagcgcagcct 90560
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     ccccgccggtgccgccggagc 237
               |||||||||||||||||||||
Sbjct: 3927829 ccccgccggtgccgccggagc 3927809



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     ggccccgccggtgccgccgg 234
               ||||||||||||||||||||
Sbjct: 3929301 ggccccgccggtgccgccgg 3929282



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     ggccccgccggtgccgccgg 234
               ||||||||||||||||||||
Sbjct: 3928704 ggccccgccggtgccgccgg 3928685



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     ggccccgccggtgccgccgg 234
               ||||||||||||||||||||
Sbjct: 3928059 ggccccgccggtgccgccgg 3928040



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 675952 ggccccgccggtgccgccgg 675971
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>gb|AC087252.3| Papio anubis clone RP41-265N24, complete sequence
          Length = 179525

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     cgctgcctctctccttgtccttggc 59
              ||||||| |||||||||||||||||
Sbjct: 124601 cgctgcccctctccttgtccttggc 124577
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ccccgccggtgccgccggagc 237
              |||||||||||||||||||||
Sbjct: 117348 ccccgccggtgccgccggagc 117328



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ccccgccggtgccgccggagc 237
              |||||||||||||||||||||
Sbjct: 116745 ccccgccggtgccgccggagc 116725



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 118838 ggccccgccggtgccgccgg 118819



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 118223 ggccccgccggtgccgccgg 118204



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 117578 ggccccgccggtgccgccgg 117559
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ccccgccggtgccgccggagc 237
              |||||||||||||||||||||
Sbjct: 128475 ccccgccggtgccgccggagc 128455



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 129320 ggccccgccggtgccgccgg 129301



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 128705 ggccccgccggtgccgccgg 128686
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     cgctgcctctctccttgtccttggc 59
              ||||||| |||||||||||||||||
Sbjct: 868374 cgctgcccctctccttgtccttggc 868350
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 173     gctgctcgcgctcgctctgctcgcc 197
               ||||||||||||||| |||||||||
Sbjct: 2827601 gctgctcgcgctcgccctgctcgcc 2827625



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 174     ctgctcgcgctcgctctgctcgcc 197
               |||||||||||||| |||||||||
Sbjct: 2321155 ctgctcgcgctcgccctgctcgcc 2321178
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>gb|AC124159.3| Macaca mulatta clone CH250-392A16, complete sequence
          Length = 131429

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    cgctgcctctctccttgtccttggc 59
             ||||||| |||||||||||||||||
Sbjct: 60903 cgctgcccctctccttgtccttggc 60879
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>emb|BX510908.8| Mouse DNA sequence from clone RP23-264F3 on chromosome 2, complete
            sequence
          Length = 80804

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 38   tgcctctctccttgtccttggctcc 62
            ||||||||||| |||||||||||||
Sbjct: 4398 tgcctctctccctgtccttggctcc 4374
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>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence
          Length = 237423

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     cctccgctgcctctctccttgtcc 54
              ||||||||||||| ||||||||||
Sbjct: 168690 cctccgctgcctcactccttgtcc 168713
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>ref|XM_510647.1| PREDICTED: Pan troglodytes similar to hypothetical protein KIAA1164
           (LOC453716), mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccagcccatccccgccgctgctct 96
           ||||||||| ||||||||||||||
Sbjct: 379 ccagcccattcccgccgctgctct 356
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>ref|XM_510443.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA B230380D07
           (LOC453474), mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccagcccatccccgccgctgctct 96
           ||||||||| ||||||||||||||
Sbjct: 379 ccagcccattcccgccgctgctct 356
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>ref|XM_468508.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 642

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cggcggcgggcgagcgcagc 154
           ||||||||||||||||||||
Sbjct: 95  cggcggcgggcgagcgcagc 114
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>ref|XM_473024.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 cgccttcaactacacctccg 363
           ||||||||||||||||||||
Sbjct: 594 cgccttcaactacacctccg 613
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 176     gctcgcgctcgctctgctcgccgg 199
               |||||||||||| |||||||||||
Sbjct: 3457850 gctcgcgctcgcgctgctcgccgg 3457827
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>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
             sequence
          Length = 139771

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   cggcggcgggcgagcgcagc 154
             ||||||||||||||||||||
Sbjct: 84244 cggcggcgggcgagcgcagc 84263
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>ref|XM_425261.1| PREDICTED: Gallus gallus similar to phosphoinositide-specific
           phospholipase C beta 1 isoform a;
           1-phosphatidylinositol-4,5-bisphosphate
           phosphodiesterase beta 1; PLC-beta-1;
           triphosphoinositide phosphodiesterase;
           monophosphatidylinositol phosphodiesterase;
           1-phosphatidyl-D... (LOC427687), mRNA
          Length = 7062

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 cttctgcgtctccgacacgc 327
           ||||||||||||||||||||
Sbjct: 417 cttctgcgtctccgacacgc 436
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>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence
          Length = 234652

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    gacacgcaggaggactggaa 340
              ||||||||||||||||||||
Sbjct: 175561 gacacgcaggaggactggaa 175542
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>ref|XM_869047.1| PREDICTED: Bos taurus similar to Tetratricopeptide repeat protein
           7B (Tetratricopeptide repeat protein 7-like-1)
           (LOC616909), mRNA
          Length = 3177

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 gccgccggagctgagggccg 246
           ||||||||||||||||||||
Sbjct: 697 gccgccggagctgagggccg 678
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>ref|XM_601426.2| PREDICTED: Bos taurus similar to tumor necrosis factor,
           alpha-induced protein 8-like 3 (LOC523131), mRNA
          Length = 2065

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 gctcgcgctcgctctgctcgccgg 199
           |||||| |||||||||||||||||
Sbjct: 541 gctcgccctcgctctgctcgccgg 518
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 176    gctcgcgctcgctctgctcgccgg 199
              |||||||||||| |||||||||||
Sbjct: 495601 gctcgcgctcgcgctgctcgccgg 495578
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>gb|AE008996.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 22 of
            256 of the complete sequence
          Length = 13016

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  gaggtgacatgccgcagcgc 419
            ||||||||||||||||||||
Sbjct: 6008 gaggtgacatgccgcagcgc 6027
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>ref|XM_658845.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6333.2), mRNA
          Length = 1431

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 ccaacgacgtcgcccaaacc 290
           ||||||||||||||||||||
Sbjct: 879 ccaacgacgtcgcccaaacc 898
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>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15,
              complete sequence
          Length = 168519

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cggcggcgggcgagcgcagc 154
              ||||||||||||||||||||
Sbjct: 112731 cggcggcgggcgagcgcagc 112750
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 21803572 cggcggcgggcgagcgcagc 21803553
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>gb|AC096363.8| Rattus norvegicus 1 BAC CH230-54P17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gctcgcgctcgctctgctcg 195
             ||||||||||||||||||||
Sbjct: 94880 gctcgcgctcgctctgctcg 94899
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     cgctctgctcgccggggccg 204
               ||||||||||||||||||||
Sbjct: 2371084 cgctctgctcgccggggccg 2371065
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>gb|DQ015584.1| Uncultured bacterium clone M3_g10_2 16S ribosomal RNA gene, partial
           sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 802 gcgggcagggcccgccggtgccgc 825
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>gb|DQ015559.1| Uncultured bacterium clone M3_e09_2 16S ribosomal RNA gene, partial
           sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 789 gcgggcagggcccgccggtgccgc 812
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>gb|DQ015550.1| Uncultured bacterium clone M3_d12_2 16S ribosomal RNA gene, partial
           sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 803 gcgggcagggcccgccggtgccgc 826
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>gb|DQ015514.1| Uncultured bacterium clone M3_a08_2 16S ribosomal RNA gene, partial
           sequence
          Length = 1344

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 802 gcgggcagggcccgccggtgccgc 825
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>gb|DQ015413.1| Uncultured bacterium clone M3_g08 16S ribosomal RNA gene, partial
           sequence
          Length = 1340

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 787 gcgggcagggcccgccggtgccgc 810
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>gb|DQ015360.1| Uncultured bacterium clone M3_b06 16S ribosomal RNA gene, partial
           sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 790 gcgggcagggcccgccggtgccgc 813
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>gb|DQ015257.1| Uncultured bacterium clone M2_1c06 16S ribosomal RNA gene, partial
           sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 808 gcgggcagggcccgccggtgccgc 831
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>gb|DQ015103.1| Uncultured bacterium clone M2_d06_1 16S ribosomal RNA gene, partial
           sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 795 gcgggcagggcccgccggtgccgc 818
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>gb|AY993407.1| Uncultured bacterium clone C19_I05 16S ribosomal RNA gene, partial
           sequence
          Length = 1280

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 762 gcgggcagggcccgccggtgccgc 785
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>gb|AY993015.1| Uncultured bacterium clone C22_o16 16S ribosomal RNA gene, partial
           sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 800 gcgggcagggcccgccggtgccgc 823
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>gb|AY992986.1| Uncultured bacterium clone C22_m22 16S ribosomal RNA gene, partial
           sequence
          Length = 1342

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 789 gcgggcagggcccgccggtgccgc 812
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>gb|AY992956.1| Uncultured bacterium clone C22_k22 16S ribosomal RNA gene, partial
           sequence
          Length = 1346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 792 gcgggcagggcccgccggtgccgc 815
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>gb|AY992909.1| Uncultured bacterium clone C22_i04 16S ribosomal RNA gene, partial
           sequence
          Length = 1341

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 785 gcgggcagggcccgccggtgccgc 808
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>gb|AY992830.1| Uncultured bacterium clone C22_e05 16S ribosomal RNA gene, partial
           sequence
          Length = 1341

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 786 gcgggcagggcccgccggtgccgc 809
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>gb|AY992789.1| Uncultured bacterium clone C22_b07 16S ribosomal RNA gene, partial
           sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 791 gcgggcagggcccgccggtgccgc 814
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>gb|AY992788.1| Uncultured bacterium clone C22_b05 16S ribosomal RNA gene, partial
           sequence
          Length = 1339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 785 gcgggcagggcccgccggtgccgc 808
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>gb|AY992784.1| Uncultured bacterium clone C22_b01 16S ribosomal RNA gene, partial
           sequence
          Length = 1291

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 733 gcgggcagggcccgccggtgccgc 756
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>gb|AY992649.1| Uncultured bacterium clone C23_m24 16S ribosomal RNA gene, partial
           sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 799 gcgggcagggcccgccggtgccgc 822
to top
>gb|AY992587.1| Uncultured bacterium clone C23_k07 16S ribosomal RNA gene, partial
           sequence
          Length = 1336

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 799 gcgggcagggcccgccggtgccgc 822
to top
>gb|AY992315.1| Uncultured bacterium clone C16_K08 16S ribosomal RNA gene, partial
           sequence
          Length = 592

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 75  gcgggcagggcccgccggtgccgc 98
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>gb|AY992303.1| Uncultured bacterium clone C16_I02 16S ribosomal RNA gene, partial
           sequence
          Length = 1280

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 763 gcgggcagggcccgccggtgccgc 786
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>gb|AY992243.1| Uncultured bacterium clone C16_L11 16S ribosomal RNA gene, partial
           sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 761 gcgggcagggcccgccggtgccgc 784
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>gb|AY992241.1| Uncultured bacterium clone C16_L07 16S ribosomal RNA gene, partial
           sequence
          Length = 1282

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 767 gcgggcagggcccgccggtgccgc 790
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>gb|AY992218.1| Uncultured bacterium clone C16_H03 16S ribosomal RNA gene, partial
           sequence
          Length = 1276

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 760 gcgggcagggcccgccggtgccgc 783
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>gb|AY992106.1| Uncultured bacterium clone C17_L041 16S ribosomal RNA gene, partial
           sequence
          Length = 1176

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 770 gcgggcagggcccgccggtgccgc 793
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>gb|AY992103.1| Uncultured bacterium clone C17_J141 16S ribosomal RNA gene, partial
           sequence
          Length = 1149

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 632 gcgggcagggcccgccggtgccgc 655
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>gb|AY991557.1| Uncultured bacterium clone C11_A011 16S ribosomal RNA gene, partial
           sequence
          Length = 521

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 3   gcgggcagggcccgccggtgccgc 26
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>gb|AY991511.1| Uncultured bacterium clone C10_F04 16S ribosomal RNA gene, partial
           sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 763 gcgggcagggcccgccggtgccgc 786
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>gb|AY990063.1| Uncultured bacterium clone C12_P11 16S ribosomal RNA gene, partial
           sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gcgggcaggccccgccggtgccgc 231
           ||||||||| ||||||||||||||
Sbjct: 761 gcgggcagggcccgccggtgccgc 784
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>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 332594 ggccccgccggtgccgccgg 332613
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 176    gctcgcgctcgctctgctcgccgg 199
              |||||||||||| |||||||||||
Sbjct: 305530 gctcgcgctcgcgctgctcgccgg 305507
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 335648 ggccccgccggtgccgccgg 335667



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 333552 ggccccgccggtgccgccgg 333571
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggccccgccggtgccgccgg 234
              ||||||||||||||||||||
Sbjct: 174135 ggccccgccggtgccgccgg 174116



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  ggccccgccggtgccgccgg 234
            ||||||||||||||||||||
Sbjct: 8744 ggccccgccggtgccgccgg 8763
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
              complete sequence
          Length = 150305

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cggcggcgggcgagcgcagc 154
              ||||||||||||||||||||
Sbjct: 105027 cggcggcgggcgagcgcagc 105046
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
              complete sequence
          Length = 145739

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    cggcggcgggcgagcgcagc 154
              ||||||||||||||||||||
Sbjct: 102379 cggcggcgggcgagcgcagc 102360
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>emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC clone B2J23
          Length = 65725

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   cctcctgctgctcgcgctcg 186
             ||||||||||||||||||||
Sbjct: 15565 cctcctgctgctcgcgctcg 15584
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>gb|U29614.1| Caenorhabditis elegans cosmid F18E9, complete sequence
          Length = 40482

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   ccgcagcgcttatgcacgcc 430
             ||||||||||||||||||||
Sbjct: 15739 ccgcagcgcttatgcacgcc 15720
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>gb|AY607024.2| Halobiforma lacisalsi bacteriorhodopsin gene, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 168 ctcctgctgctcgcgctcgctctgctcgccgg 199
           |||||||||||||  ||||| |||||||||||
Sbjct: 566 ctcctgctgctcgacctcgcactgctcgccgg 597
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>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gccccgccggtgccgccgga 235
              ||||||||||||||||||||
Sbjct: 316494 gccccgccggtgccgccgga 316475
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    gaggtgacatgccgcagcgc 419
              ||||||||||||||||||||
Sbjct: 234722 gaggtgacatgccgcagcgc 234741
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 290      catctccgaccgcttcagcttctgcgtc 317
                |||||||||| || ||||||||||||||
Sbjct: 27301533 catctccgacggcctcagcttctgcgtc 27301560



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 18939997 cggcggcgggcgagcgcagc 18939978
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 23427195 cggcggcgggcgagcgcagc 23427214
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 21796601 cggcggcgggcgagcgcagc 21796582
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 135      cggcggcgggcgagcgcagc 154
                ||||||||||||||||||||
Sbjct: 35590026 cggcggcgggcgagcgcagc 35590045
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>gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosome 5, complete sequence
          Length = 225445

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    gacacgcaggaggactggaa 340
              ||||||||||||||||||||
Sbjct: 219211 gacacgcaggaggactggaa 219230
to top
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0452F04
          Length = 171421

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cggcggcgggcgagcgcagc 154
              ||||||||||||||||||||
Sbjct: 106418 cggcggcgggcgagcgcagc 106437
to top
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0485D10
          Length = 147464

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    cggcggcgggcgagcgcagc 154
              ||||||||||||||||||||
Sbjct: 105562 cggcggcgggcgagcgcagc 105543
to top
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0009J19
          Length = 156988

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   cggcggcgggcgagcgcagc 154
             ||||||||||||||||||||
Sbjct: 32667 cggcggcgggcgagcgcagc 32648
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     tctccgacacgcaggaggac 335
               ||||||||||||||||||||
Sbjct: 6738907 tctccgacacgcaggaggac 6738926
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>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 290    catctccgaccgcttcagcttctgcgtc 317
              |||||||||| || ||||||||||||||
Sbjct: 158549 catctccgacggcctcagcttctgcgtc 158576
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>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 290   catctccgaccgcttcagcttctgcgtc 317
             |||||||||| || ||||||||||||||
Sbjct: 44360 catctccgacggcctcagcttctgcgtc 44387
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>dbj|AK110673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-G05, full
           insert sequence
          Length = 1110

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cctcctgctgctcgcgctcg 186
           ||||||||||||||||||||
Sbjct: 688 cctcctgctgctcgcgctcg 669
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>dbj|AK108036.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C07, full
           insert sequence
          Length = 1482

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 290 catctccgaccgcttcagcttctgcgtc 317
           |||||||||| || ||||||||||||||
Sbjct: 371 catctccgacggcctcagcttctgcgtc 344
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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
              complete sequence
          Length = 133856

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    cgccttcaactacacctccg 363
              ||||||||||||||||||||
Sbjct: 132315 cgccttcaactacacctccg 132334
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
            complete sequence
          Length = 170765

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  cgccttcaactacacctccg 363
            ||||||||||||||||||||
Sbjct: 4508 cgccttcaactacacctccg 4527
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>gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence
          Length = 202455

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    gctgcctctctccttgtccttggc 59
             |||||| |||||||||||||||||
Sbjct: 82668 gctgcccctctccttgtccttggc 82645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,058,413
Number of Sequences: 3902068
Number of extensions: 3058413
Number of successful extensions: 74329
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72213
Number of HSP's gapped (non-prelim): 2116
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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