ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08c10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D20, full insert sequence Length = 5081 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 284 gaagcgcggcgcatccgcggctgccgcagcggcggcggccgcagcgcagtggaaggccgg 343 ||||||||| || ||||||| || || |||||||| || || ||||||||||||| || Sbjct: 273 gaagcgcggggcggccgcggcagcggccgcggcggccgctgcggcgcagtggaaggtggg 332 Query: 344 cgacctggtgctcgccaagatgaagggcttccccgcatggccagccatgataagtga 400 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 333 cgacctcgtgctcgccaagatgaagggcttcccggcgtggccggccatgataagtga 389
>ref|XM_479387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4350 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 284 gaagcgcggcgcatccgcggctgccgcagcggcggcggccgcagcgcagtggaaggccgg 343 ||||||||| || ||||||| || || |||||||| || || ||||||||||||| || Sbjct: 18 gaagcgcggggcggccgcggcagcggccgcggcggccgctgcggcgcagtggaaggtggg 77 Query: 344 cgacctggtgctcgccaagatgaagggcttccccgcatggccagccatg 392 |||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 78 cgacctcgtgctcgccaagatgaagggcttcccggcgtggccggccatg 126
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 284 gaagcgcggcgcatccgcggctgccgcagcggcggcggccgcagcgcagtggaaggccgg 343 ||||||||| || ||||||| || || |||||||| || || ||||||||||||| || Sbjct: 27502563 gaagcgcggggcggccgcggcagcggccgcggcggccgctgcggcgcagtggaaggtggg 27502622 Query: 344 cgacctggtgctcgccaagatgaagggcttccccgcatggccagccatg 392 |||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 27502623 cgacctcgtgctcgccaagatgaagggcttcccggcgtggccggccatg 27502671 Score = 44.1 bits (22), Expect = 0.35 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 51 cttcccctcgccgccgcctgccgccgccgt 80 |||||||||||||||||| ||||||||||| Sbjct: 3160113 cttcccctcgccgccgcc-gccgccgccgt 3160141 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagg 108 ||||||||||||||||||||| Sbjct: 16758163 gaagggaagaggagggggagg 16758143 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggccgc 325 |||| |||||||| |||||||||||||| Sbjct: 21576226 ccgccgctgccgcggcggcggcggccgc 21576253 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 gccgcagcggcggcggccgcagcg 329 ||||||||||||||||| |||||| Sbjct: 16164429 gccgcagcggcggcggcggcagcg 16164452
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 284 gaagcgcggcgcatccgcggctgccgcagcggcggcggccgcagcgcagtggaaggccgg 343 ||||||||| || ||||||| || || |||||||| || || ||||||||||||| || Sbjct: 66534 gaagcgcggggcggccgcggcagcggccgcggcggccgctgcggcgcagtggaaggtggg 66593 Query: 344 cgacctggtgctcgccaagatgaagggcttccccgcatggccagccatg 392 |||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 66594 cgacctcgtgctcgccaagatgaagggcttcccggcgtggccggccatg 66642
>gb|AY023151.1| Oryza sativa microsatellite MRG5476 containing (GCC)X9, genomic sequence Length = 227 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcagtggaaggccggcgacctggtgctcgccaagatgaagggc 371 |||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||| Sbjct: 111 gcggcggcggccgcggcgcagtggaaggtgggggacctcgtgctcgctaagatgaagggc 52 Query: 372 ttccccgcatggccagccatg 392 ||||| || ||||| |||||| Sbjct: 51 ttcccggcgtggccggccatg 31
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcagtggaaggccggcgacctggtgctcgccaagatgaagggc 371 |||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||| Sbjct: 13698681 gcggcggcggccgcggcgcagtggaaggtgggggacctcgtgctcgctaagatgaagggc 13698622 Query: 372 ttccccgcatggccagccatg 392 ||||| || ||||| |||||| Sbjct: 13698621 ttcccggcgtggccggccatg 13698601 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccg 324 ||||||||||||||||||||||| Sbjct: 5575482 ggctgccgcagcggcggcggccg 5575504 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 ccctcgccgccgcctgccgccg 76 |||||||||||||||||||||| Sbjct: 17255020 ccctcgccgccgcctgccgccg 17254999 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 35536780 cgccgccgcctgccgccgccg 35536800 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgca 326 ||||||||||||||||||||| Sbjct: 15955499 gccgcagcggcggcggccgca 15955479 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccgc 325 ||||||||||||| |||||||||| Sbjct: 34376315 ggctgccgcagcgccggcggccgc 34376338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 9269874 cctcgccgccgccggccgccgccg 9269897 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgcagcg 329 ||||| |||||||||||||||||| Sbjct: 4532588 gccgcggcggcggcggccgcagcg 4532565 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 1133123 cctcgccgccgcccgccgccgccg 1133100
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcagtggaaggccggcgacctggtgctcgccaagatgaagggc 371 |||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||| Sbjct: 13693656 gcggcggcggccgcggcgcagtggaaggtgggggacctcgtgctcgctaagatgaagggc 13693597 Query: 372 ttccccgcatggccagccatg 392 ||||| || ||||| |||||| Sbjct: 13693596 ttcccggcgtggccggccatg 13693576 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccg 324 ||||||||||||||||||||||| Sbjct: 5574697 ggctgccgcagcggcggcggccg 5574719 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 ccctcgccgccgcctgccgccg 76 |||||||||||||||||||||| Sbjct: 17248561 ccctcgccgccgcctgccgccg 17248540 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 35626852 cgccgccgcctgccgccgccg 35626872 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgca 326 ||||||||||||||||||||| Sbjct: 15950033 gccgcagcggcggcggccgca 15950013 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccgc 325 ||||||||||||| |||||||||| Sbjct: 34466787 ggctgccgcagcgccggcggccgc 34466810 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 9267707 cctcgccgccgccggccgccgccg 9267730 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgcagcg 329 ||||| |||||||||||||||||| Sbjct: 4532703 gccgcggcggcggcggccgcagcg 4532680 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 1133121 cctcgccgccgcccgccgccgccg 1133098
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcagtggaaggccggcgacctggtgctcgccaagatgaagggc 371 |||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||| Sbjct: 89353 gcggcggcggccgcggcgcagtggaaggtgggggacctcgtgctcgctaagatgaagggc 89294 Query: 372 ttccccgcatggccagccatg 392 ||||| || ||||| |||||| Sbjct: 89293 ttcccggcgtggccggccatg 89273
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 345 gacctggtgctcgccaagatgaagggcttcccc 377 ||||||||| ||||||||||||||||||||||| Sbjct: 93705 gacctggtgttcgccaagatgaagggcttcccc 93673
>ref|XM_873247.1| PREDICTED: Bos taurus similar to hepatoma-derived growth factor-related protein 2 isoform 1, transcript variant 2 (LOC512959), mRNA Length = 2342 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 340 ccggcgacctggtgctcgccaagatgaagggct 372 |||| ||||||||| |||||||||||||||||| Sbjct: 98 ccggggacctggtgttcgccaagatgaagggct 130
>ref|XM_590572.2| PREDICTED: Bos taurus similar to hepatoma-derived growth factor-related protein 2 isoform 1, transcript variant 1 (LOC512959), mRNA Length = 2306 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 340 ccggcgacctggtgctcgccaagatgaagggct 372 |||| ||||||||| |||||||||||||||||| Sbjct: 98 ccggggacctggtgttcgccaagatgaagggct 130
>ref|XM_609453.2| PREDICTED: Bos taurus similar to Hepatoma-derived growth factor-related protein 3 (HRP-3) (Hepatoma-derived growth factor 2) (LOC530971), mRNA Length = 2168 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 336 aaggccggcgacctggtgctcgccaagatgaagggct 372 ||||| ||||||||||| |||||||||||||||||| Sbjct: 354 aaggcgggcgacctggtcttcgccaagatgaagggct 390
>ref|NM_004494.1| Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), mRNA Length = 2376 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 355 gacctggtgttcgccaagatgaagggct 382
>ref|XM_513894.1| PREDICTED: Pan troglodytes LOC457404 (LOC457404), mRNA Length = 1115 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 240 gacctggtgttcgccaagatgaagggct 267
>gb|BT019479.1| Synthetic construct Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) mRNA, partial cds Length = 723 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 40 gacctggtgttcgccaagatgaagggct 67
>gb|BT017716.1| Zea mays clone EL01N0446H11.c mRNA sequence Length = 791 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 304 ctgccgcagcggcggcggccgcag 327 |||||||||||||||||||||||| Sbjct: 65 ctgccgcagcggcggcggccgcag 42
>gb|BC018991.1| Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like), mRNA (cDNA clone MGC:20061 IMAGE:3503321), complete cds Length = 2096 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 213 gacctggtgttcgccaagatgaagggct 240
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 100015 gacctggtgttcgccaagatgaagggct 99988
>emb|AJ006687.1|CCR6687 Caulobacter crescentus major chemotaxis operon Length = 7821 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgcagcg 329 |||||||||||||||||||||||| Sbjct: 1496 gccgcagcggcggcggccgcagcg 1473
>emb|CR626656.1| full-length cDNA clone CS0DL001YE15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2263 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 270 gacctggtgttcgccaagatgaagggct 297
>emb|CR593023.1| full-length cDNA clone CS0DI023YA24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1635 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 280 gacctggtgttcgccaagatgaagggct 307
>ref|NM_175832.2| Bos taurus hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), mRNA Length = 1932 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 283 gacctggtgttcgccaagatgaagggct 310
>gb|AY890874.1| Synthetic construct Homo sapiens clone FLH021504.01L hepatoma-derived growth factor (HDGF) mRNA, partial cds Length = 723 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 40 gacctggtgttcgccaagatgaagggct 67
>gb|AY890873.1| Synthetic construct Homo sapiens clone FLH021503.01L hepatoma-derived growth factor (HDGF) mRNA, partial cds Length = 723 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 40 gacctggtgttcgccaagatgaagggct 67
>gb|AY104581.1| Zea mays PCO117879 mRNA sequence Length = 652 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 304 ctgccgcagcggcggcggccgcag 327 |||||||||||||||||||||||| Sbjct: 98 ctgccgcagcggcggcggccgcag 75
>emb|AJ237996.1|BTA237996 Bos taurus mRNA for hepatoma derived growth factor Length = 1932 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 283 gacctggtgttcgccaagatgaagggct 310
>dbj|D16431.1|HUMHDGF Human mRNA for hepatoma-derived growth factor, complete cds Length = 2376 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 ||||||||| |||||||||||||||||| Sbjct: 355 gacctggtgttcgccaagatgaagggct 382
>ref|NM_016073.2| Homo sapiens hepatoma-derived growth factor, related protein 3 (HDGFRP3), mRNA Length = 1973 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 189 ggcgacctggtcttcgccaagatgaagggct 219
>gb|BC015483.1| Homo sapiens hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:8892 IMAGE:3913558), complete cds Length = 1817 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 132 ggcgacctggtcttcgccaagatgaagggct 162
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 aggccggcgacctggtgctcgcc 359 ||||||||||||||||||||||| Sbjct: 23229 aggccggcgacctggtgctcgcc 23207
>gb|BC040554.1| Homo sapiens hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:39836 IMAGE:5303793), complete cds Length = 2327 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 641 ggcgacctggtcttcgccaagatgaagggct 671
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccg 324 ||||||||||||||||||||||| Sbjct: 119014 ggctgccgcagcggcggcggccg 119036
>emb|CR611705.1| full-length cDNA clone CS0DB006YI07 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1809 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 151 ggcgacctggtcttcgccaagatgaagggct 181
>emb|CR598906.1| full-length cDNA clone CS0DB006YG12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1526 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 139 ggcgacctggtcttcgccaagatgaagggct 169
>dbj|AK001280.1| Homo sapiens cDNA FLJ10418 fis, clone NT2RP1000130, moderately similar to HEPATOMA-DERIVED GROWTH FACTOR Length = 1973 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 189 ggcgacctggtcttcgccaagatgaagggct 219
>gb|AF110642.1| Homo sapiens hepatoma-derived growth factor 2 (HDGF2) mRNA, complete cds Length = 1423 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 158 ggcgacctggtcttcgccaagatgaagggct 188
>ref|NM_143511.2| Drosophila melanogaster CG7946-RA (CG7946), mRNA Length = 2043 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 |||||||||||| |||||||| ||||||||| Sbjct: 322 ggcgacctggtgttcgccaaggtgaagggct 352
>gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, complete sequence Length = 113199 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Minus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 17722 ggcgacctggtcttcgccaagatgaagggct 17692
>gb|AY051690.1| Drosophila melanogaster LD23804 full length cDNA Length = 1859 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 |||||||||||| |||||||| ||||||||| Sbjct: 121 ggcgacctggtgttcgccaaggtgaagggct 151
>gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, region 99D-99D, BAC clone BACR07A18, complete sequence Length = 168469 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 |||||||||||| |||||||| ||||||||| Sbjct: 162863 ggcgacctggtgttcgccaaggtgaagggct 162893
>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone BACR05L15, complete sequence Length = 181056 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 |||||||||||| |||||||| ||||||||| Sbjct: 6890 ggcgacctggtgttcgccaaggtgaagggct 6920
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccg 324 ||||||||||||||||||||||| Sbjct: 39181 ggctgccgcagcggcggcggccg 39203
>gb|AF151900.1|AF151900 Homo sapiens CGI-142 protein mRNA, complete cds Length = 1830 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 158 ggcgacctggtcttcgccaagatgaagggct 188
>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the complete sequence Length = 228443 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 |||||||||||| |||||||| ||||||||| Sbjct: 76431 ggcgacctggtgttcgccaaggtgaagggct 76461
>dbj|AB029156.1| Homo sapiens HRP-3 mRNA, complete cds Length = 1427 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 ggcgacctggtgctcgccaagatgaagggct 372 ||||||||||| |||||||||||||||||| Sbjct: 154 ggcgacctggtcttcgccaagatgaagggct 184
>ref|NM_115725.2| Arabidopsis thaliana transcription factor AT3G58630 mRNA, complete cds Length = 1392 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 293 cgcatccgcggctgccgcagcggcggcggc 322 ||||| |||||| ||||||||||||||||| Sbjct: 743 cgcattcgcggcagccgcagcggcggcggc 772
>ref|NM_188021.1| Oryza sativa (japonica cultivar-group), Ozsa8441 predicted mRNA Length = 1197 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 cccctcgccgccgcctgccgccgccg 79 ||||| |||||||||||||||||||| Sbjct: 99 cccctggccgccgcctgccgccgccg 74
>ref|XM_471533.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tcctcttcccctcgccgccgcc 68 |||||||||||||||||||||| Sbjct: 106 tcctcttcccctcgccgccgcc 85
>ref|XM_468724.1| Oryza sativa (japonica cultivar-group), mRNA Length = 327 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 ccctcgccgccgcctgccgccg 76 |||||||||||||||||||||| Sbjct: 174 ccctcgccgccgcctgccgccg 195
>ref|XM_476685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 44.1 bits (22), Expect = 0.35 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 51 cttcccctcgccgccgcctgccgccgccgt 80 |||||||||||||||||| ||||||||||| Sbjct: 1071 cttcccctcgccgccgcc-gccgccgccgt 1043
>ref|XM_602541.2| PREDICTED: Bos taurus similar to RNA binding motif protein 24 (LOC524220), mRNA Length = 2875 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| ||||||||||||||||| |||||| Sbjct: 1033 gcggcggccgcagcggcggcggcggcagcg 1004
>gb|BC052033.1| Mus musculus aristaless related homeobox gene (Drosophila), mRNA (cDNA clone MGC:62389 IMAGE:5707995), complete cds Length = 2759 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| || |||||||||||||||||| Sbjct: 389 gcggctgcagcggcggcggcggccgcagcg 418
>ref|XM_707877.1| Candida albicans SC5314 cyclin gene-controlling transcription factor SBF protein (CaO19.4545), mRNA Length = 3000 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggccgcagc 328 ||||| |||||||||||||||||||| Sbjct: 440 gctgctgcagcggcggcggccgcagc 415
>ref|XM_707783.1| Candida albicans SC5314 putative DNA binding component of SBF (CaO19.12020), mRNA Length = 3000 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggccgcagc 328 ||||| |||||||||||||||||||| Sbjct: 440 gctgctgcagcggcggcggccgcagc 415
>gb|AY340972.1| Oryctolagus cuniculus forkhead transcription factor L2 (FoxL2) gene, complete cds Length = 1155 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| ||||| |||||||||||||||||| Sbjct: 667 gcggcggccgcggcggcggcggccgcagcg 696
>gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosome 3, complete sequence Length = 160255 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagga 109 |||||||||||||||||||||| Sbjct: 36620 gaagggaagaggagggggagga 36599
>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete sequence Length = 168526 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| || ||||||||||||||||||||| Sbjct: 165344 gcggccgcagcagcggcggcggccgcagcg 165315
>ref|NM_008023.1| Mus musculus forkhead box B2 (Foxb2), mRNA Length = 1515 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| || ||||||||||||||||||||| Sbjct: 854 gcggccgcagcagcggcggcggccgcagcg 883
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 ccctcgccgccgcctgccgccg 76 |||||||||||||||||||||| Sbjct: 87764 ccctcgccgccgcctgccgccg 87743
>ref|NM_007492.3| Mus musculus aristaless related homeobox gene (Drosophila) (Arx), mRNA Length = 2759 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| || |||||||||||||||||| Sbjct: 389 gcggctgcagcggcggcggcggccgcagcg 418
>emb|X92591.1|MMFKH4 M.musculus mRNA for fkh-4 protein Length = 1515 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| || ||||||||||||||||||||| Sbjct: 854 gcggccgcagcagcggcggcggccgcagcg 883
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 ccctcgccgccgcctgccgccg 76 |||||||||||||||||||||| Sbjct: 146385 ccctcgccgccgcctgccgccg 146364
>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03, complete sequence Length = 135169 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tcctcttcccctcgccgccgcc 68 |||||||||||||||||||||| Sbjct: 46454 tcctcttcccctcgccgccgcc 46433
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 293 cgcatccgcggctgccgcagcggcggcggc 322 ||||| |||||| ||||||||||||||||| Sbjct: 78700 cgcattcgcggcagccgcagcggcggcggc 78671
>gb|AC153149.4| Mus musculus BAC clone RP23-176O2 from chromosome 3, complete sequence Length = 206540 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 gaagggaagaggagggggagga 109 |||||||||||||||||||||| Sbjct: 89563 gaagggaagaggagggggagga 89584
>gb|AC023698.4| Drosophila melanogaster X BAC RP98-17C9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160023 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||||||||||||||| || |||||| Sbjct: 130267 gcggctgccgcagcggcggcagcagcagcg 130238
>gb|AE005716.1| Caulobacter crescentus CB15 section 42 of 359 of the complete genome Length = 10119 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgcag 327 |||||||||||||||||||||| Sbjct: 3900 gccgcagcggcggcggccgcag 3879
>gb|AC023728.5| Drosophila melanogaster X BAC RP98-6J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175674 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||||||||||||||| || |||||| Sbjct: 66669 gcggctgccgcagcggcggcagcagcagcg 66640
>ref|NM_132155.2| Drosophila melanogaster CG4617-RA (CG4617), mRNA Length = 1706 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||||||||||||||| || |||||| Sbjct: 918 gcggctgccgcagcggcggcagcagcagcg 947
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcgc 330 |||||||||||||||||||||| Sbjct: 38312 gcagcggcggcggccgcagcgc 38291
>gb|AY051996.1| Drosophila melanogaster LD46272 full length cDNA Length = 1689 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||||||||||||||| || |||||| Sbjct: 887 gcggctgccgcagcggcggcagcagcagcg 916
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tcctcttcccctcgccgccgcc 68 |||||||||||||||||||||| Sbjct: 12117904 tcctcttcccctcgccgccgcc 12117883 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggcggtggcggcgctgcggct 246 ||||||||||||||||||||| Sbjct: 23811455 ggcggtggcggcgctgcggct 23811435 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccgcagcg 329 |||||| |||||||||||||| |||||| Sbjct: 26771523 ggctgctgcagcggcggcggctgcagcg 26771550 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggcc 323 |||||||| ||||||||||||||| Sbjct: 19844610 gcggctgcggcagcggcggcggcc 19844633
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 cccctcgccgccgcctgccgccgccg 79 ||||| |||||||||||||||||||| Sbjct: 9170801 cccctggccgccgcctgccgccgccg 9170776 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 30842227 gcagcggcggcggccgcagcg 30842207 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 4986965 cgccgccgcctgccgccgccg 4986985 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tcgccgccgcctgccgccgc 77 |||||||||||||||||||| Sbjct: 26390537 tcgccgccgcctgccgccgc 26390518
>emb|BX822637.1|CNS0A77X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 293 cgcatccgcggctgccgcagcggcggcggc 322 ||||| |||||| ||||||||||||||||| Sbjct: 713 cgcattcgcggcagccgcagcggcggcggc 742
>dbj|AB026674.2| Mus musculus Arx gene for Arx homeodomain protein, complete cds Length = 5880 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| || |||||||||||||||||| Sbjct: 2331 gcggctgcagcggcggcggcggccgcagcg 2360
>gb|BT005520.1| Arabidopsis thaliana clone U50694 unknown protein (At3g58630) mRNA, complete cds Length = 997 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 293 cgcatccgcggctgccgcagcggcggcggc 322 ||||| |||||| ||||||||||||||||| Sbjct: 573 cgcattcgcggcagccgcagcggcggcggc 602
>ref|XM_344239.2| PREDICTED: Rattus norvegicus paired-like homeobox 2b (Phox2b), mRNA Length = 1586 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| |||||||||||||| |||||| Sbjct: 946 gcggctgctgcagcggcggcggcggcagcg 975
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 cccctcgccgccgcctgccgccgccg 79 ||||| |||||||||||||||||||| Sbjct: 71183 cccctggccgccgcctgccgccgccg 71158
>gb|AF218816.1|AF218816 Cloning vector pEGAD, complete sequence Length = 12594 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggccgcagc 328 |||||||||||||| ||||||||||| Sbjct: 1715 gctgccgcagcggcagcggccgcagc 1690
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 44.1 bits (22), Expect = 0.35 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 51 cttcccctcgccgccgcctgccgccgccgt 80 |||||||||||||||||| ||||||||||| Sbjct: 75103 cttcccctcgccgccgcc-gccgccgccgt 75131
>dbj|AK118084.1| Arabidopsis thaliana At3g58630 mRNA for unknown protein, complete cds, clone: RAFL19-33-K15 Length = 1392 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 293 cgcatccgcggctgccgcagcggcggcggc 322 ||||| |||||| ||||||||||||||||| Sbjct: 742 cgcattcgcggcagccgcagcggcggcggc 771
>gb|AE003439.3| Drosophila melanogaster chromosome X, section 23 of 74 of the complete sequence Length = 331952 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||||||||||||||| || |||||| Sbjct: 263929 gcggctgccgcagcggcggcagcagcagcg 263900
>gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, complete sequence Length = 221568 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 ||||| || ||||||||||||||||||||| Sbjct: 161137 gcggccgcagcagcggcggcggccgcagcg 161166
>dbj|AB006103.2| Mus musculus mRNA for Arx homeoprotein, complete cds Length = 2445 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| || |||||||||||||||||| Sbjct: 395 gcggctgcagcggcggcggcggccgcagcg 424
>emb|AL590876.20| Mouse DNA sequence from clone RP23-53K18 on chromosome X, complete sequence Length = 67297 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagcg 329 |||||||| || |||||||||||||||||| Sbjct: 21330 gcggctgcagcggcggcggcggccgcagcg 21359
>ref|NM_117235.3| Arabidopsis thaliana AT-HSFB2B; transcription factor AT4G11660 (AT-HSFB2B) mRNA, complete cds Length = 1988 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 843 ccgcggctgctgcagcggcggcggc 867
>ref|NM_189683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 210 cgccgccgcctgccgccgccg 230
>ref|XM_481693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1613 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 gcggcggcggccgcagcgcag 332 ||||||||||||||||||||| Sbjct: 341 gcggcggcggccgcagcgcag 361
>ref|XM_482149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1312 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 47 tcctcttcccctcgccgccgcctgccgccgccg 79 |||||||| ||||||||||||| |||||||||| Sbjct: 35 tcctcttcgcctcgccgccgcc-gccgccgccg 66
>ref|NM_191134.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 2542 gcagcggcggcggccgcagcg 2562
>ref|XM_470420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1317 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 17 cgccgccgcctgccgccgccg 37
>ref|XM_470881.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gccgcagcggcggcggccgca 326 ||||||||||||||||||||| Sbjct: 50 gccgcagcggcggcggccgca 30
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ggaagaggagggggaggacga 112 ||||||||||||||||||||| Sbjct: 1310529 ggaagaggagggggaggacga 1310549
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gccgcagcggcggcggccgca 326 ||||||||||||||||||||| Sbjct: 94918 gccgcagcggcggcggccgca 94938
>ref|XM_585327.2| PREDICTED: Bos taurus similar to non-imprinted in Prader-Willi/Angelman syndrome 1 (LOC539162), partial mRNA Length = 1274 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccg 324 |||||||| |||||||||||||||| Sbjct: 309 gcggctgctgcagcggcggcggccg 333
>ref|XM_868837.1| PREDICTED: Bos taurus similar to forkhead box E1 (LOC616734), mRNA Length = 2400 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 1811 gcagcggcggcggccgcagcg 1791
>gb|BC073215.1| Xenopus laevis cDNA clone MGC:80502 IMAGE:5156883, complete cds Length = 2487 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 717 gcggctgcagcagcggcggcggcggcagc 689
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggcggtggcggcgctgcggct 246 ||||||||||||||||||||| Sbjct: 528986 ggcggtggcggcgctgcggct 529006
>gb|DQ478880.1| Uncultured bacterium pFosLip hypothetical protein gene, partial cds; and putative membrane protein, NnrU, hypothetical proteins, adenylosuccinate synthetase, HflC, HflK, GTP-binding protein, GTPase, Hfq, delta(2)-isopentenylpyrophosphate adenosine transferase, DNA mismatch repair protein mutL, N-acetylmuramoyl-L-alanine amidase, and hypothetical protein genes, complete cds Length = 15364 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 269 ggcgccagtgaggaggaagcgcggc 293 ||||||||||| ||||||||||||| Sbjct: 13877 ggcgccagtgacgaggaagcgcggc 13853
>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence Length = 248320 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagg 108 ||||||||||||||||||||| Sbjct: 147381 gaagggaagaggagggggagg 147361
>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence Length = 184690 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 agctgaagggaagaggagggg 104 ||||||||||||||||||||| Sbjct: 88227 agctgaagggaagaggagggg 88247
>gb|BC060848.1| Homo sapiens midnolin, mRNA (cDNA clone IMAGE:30347756), partial cds Length = 3639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 939 gcagcggcggcggccgcagcg 919
>gb|AY330185.1| Euprymna scolopes Hox class homeodomain-containing protein Hox3 mRNA, partial sequence Length = 1158 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 ||||| |||||||| |||||||||||||| Sbjct: 103 gcggcggccgcagcagcggcggccgcagc 131
>emb|AL672047.10| Mouse DNA sequence from clone RP23-316B4 on chromosome X, complete sequence Length = 183697 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagg 108 ||||||||||||||||||||| Sbjct: 107738 gaagggaagaggagggggagg 107718
>emb|CR695356.2|CNS0FZHK Tetraodon nigroviridis full-length cDNA Length = 808 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ggaagaggagggggaggacga 112 ||||||||||||||||||||| Sbjct: 154 ggaagaggagggggaggacga 174
>emb|CR694496.2|CNS0FYTO Tetraodon nigroviridis full-length cDNA Length = 807 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ggaagaggagggggaggacga 112 ||||||||||||||||||||| Sbjct: 154 ggaagaggagggggaggacga 174
>emb|AL356775.14| Human DNA sequence from clone RP11-355M14 on chromosome 6 Contains the 3' end of the gene for popeye protein 3 (POP3), the gene for a novel protein (DKFZp434F2226), the 5' end of the BVES gene for blood epicardial substance and a CpG island, complete sequence Length = 43825 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gccgccgcctgccgccgccgt 80 ||||||||||||||||||||| Sbjct: 24493 gccgccgcctgccgccgccgt 24513
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 40796 gcagcggcggcggccgcagcg 40776
>ref|NM_009575.1| Mus musculus zinc finger protein of the cerebellum 3 (Zic3), mRNA Length = 3509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 693 gcagcggcggcggccgcagcg 673
>gb|BC094778.1| Homo sapiens midnolin, mRNA (cDNA clone MGC:104683 IMAGE:30342357), complete cds Length = 3354 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 939 gcagcggcggcggccgcagcg 919
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggcggtggcggcgctgcggct 246 ||||||||||||||||||||| Sbjct: 132367 ggcggtggcggcgctgcggct 132347
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 94498 ccgcggctgctgcagcggcggcggc 94522
>emb|AL049500.1|ATT5C23 Arabidopsis thaliana DNA chromosome 4, BAC clone T5C23 (ESSA project) Length = 87104 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 37334 ccgcggctgctgcagcggcggcggc 37358
>emb|AJ251868.1|ATH251868 Arabidopsis thaliana partial mRNA for heat shock factor 7 (hsf7 gene) Length = 1452 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 325 ccgcggctgctgcagcggcggcggc 349
>gb|BT008471.1| Arabidopsis thaliana At4g11660 gene, complete cds Length = 1134 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 470 ccgcggctgctgcagcggcggcggc 494
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 70882 gcggctgcagcagcggcggcggcagcagc 70854
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 6076 gcggctgcagcagcggcggcggcagcagc 6048
>ref|NM_169970.1| Drosophila melanogaster Calcium/calmodulin-dependent protein kinase CG6703-RA, transcript variant A (Caki), mRNA Length = 4129 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gcatccgcggctgccgcagcggcgg 318 ||||||||||||||| ||||||||| Sbjct: 1576 gcatccgcggctgccacagcggcgg 1552
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 4839 gcggctgcagcagcggcggcggcagcagc 4867
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 4066 gcggctgcagcagcggcggcggcagcagc 4094
>gb|AY093206.1| Arabidopsis thaliana heat shock transcription factor-like protein (At4g11660) mRNA, complete cds Length = 1961 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 816 ccgcggctgctgcagcggcggcggc 840
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggcggtggcggcgctgcggct 246 ||||||||||||||||||||| Sbjct: 3463653 ggcggtggcggcgctgcggct 3463673
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 3986 gcggctgcagcagcggcggcggcagcagc 4014
>dbj|AK134355.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030442C01 product:zinc finger protein of the cerebellum 3, full insert sequence Length = 3191 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 327 gcagcggcggcggccgcagcg 307
>dbj|AK139364.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830029P21 product:zinc finger protein of the cerebellum 3, full insert sequence Length = 5285 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 709 gcagcggcggcggccgcagcg 689
>gb|AC079380.6| Homo sapiens BAC clone RP11-427M20 from 4, complete sequence Length = 166166 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 agtatgaaagagaagaagaga 21 ||||||||||||||||||||| Sbjct: 94368 agtatgaaagagaagaagaga 94348
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 gctcgccaagatgaagggctt 373 ||||||||||||||||||||| Sbjct: 2185058 gctcgccaagatgaagggctt 2185078
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 cgcggcgcatccgcggctgccgcag 312 |||||||||||||| |||||||||| Sbjct: 849182 cgcggcgcatccgctgctgccgcag 849158
>dbj|AK034780.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430037B07 product:zinc finger protein of the cerebellum 3, full insert sequence Length = 1952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 328 gcagcggcggcggccgcagcg 308
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 47 tcctcttcccctcgccgccgcctgccgccgccg 79 |||||||| ||||||||||||| |||||||||| Sbjct: 18182199 tcctcttcgcctcgccgccgcc-gccgccgccg 18182230 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcag 332 ||||||||||||||||||||| Sbjct: 14758685 gcggcggcggccgcagcgcag 14758665
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 24686049 cgccgccgcctgccgccgccg 24686069 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 cccctcgccgccgcctgccgccgcc 78 ||||||||||||||| ||||||||| Sbjct: 12703314 cccctcgccgccgccggccgccgcc 12703338
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ccgccgcctgccgccgccgttgaag 85 |||||||||||||||||||| |||| Sbjct: 20046384 ccgccgcctgccgccgccgtcgaag 20046408 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcttcccctcgccgccgcct 69 |||||||||||||||||||| Sbjct: 34369890 tcttcccctcgccgccgcct 34369909 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cagcggcggcggccgcagcg 329 |||||||||||||||||||| Sbjct: 21175891 cagcggcggcggccgcagcg 21175872
>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR42I20, complete sequence Length = 164944 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 gcatccgcggctgccgcagcggcgg 318 ||||||||||||||| ||||||||| Sbjct: 58198 gcatccgcggctgccacagcggcgg 58222
>emb|BX827353.1|CNS0A2D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1971 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggc 322 |||||||||| |||||||||||||| Sbjct: 847 ccgcggctgctgcagcggcggcggc 871
>gb|AC022146.8| Homo sapiens chromosome 19 clone CTD-3020H12, complete sequence Length = 226699 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ggaagaggagggggaggacga 112 ||||||||||||||||||||| Sbjct: 156797 ggaagaggagggggaggacga 156817
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 42594 gcagcggcggcggccgcagcg 42574
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 gctgccgcagcggcggcggccgcag 327 |||||||||||||||| |||||||| Sbjct: 2709124 gctgccgcagcggcgggggccgcag 2709148
>gb|BT003550.1| Drosophila melanogaster RE01835 full insert cDNA Length = 3993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gcatccgcggctgccgcagcggcgg 318 ||||||||||||||| ||||||||| Sbjct: 1441 gcatccgcggctgccacagcggcgg 1417
>ref|NM_177401.4| Homo sapiens midnolin (MIDN), mRNA Length = 3812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 1045 gcagcggcggcggccgcagcg 1025
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agtggaaggccggcgacctgg 351 ||||||||||||||||||||| Sbjct: 25620 agtggaaggccggcgacctgg 25600
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggcggtggcggcgctgcggct 246 ||||||||||||||||||||| Sbjct: 1749646 ggcggtggcggcgctgcggct 1749666
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 69743 cgccgccgcctgccgccgccg 69763
>ref|XM_219327.3| PREDICTED: Rattus norvegicus similar to homeodomain protein (LOC293537), mRNA Length = 2526 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccg 324 ||||| ||||||||||||||||||| Sbjct: 1367 gcggcggccgcagcggcggcggccg 1343
>gb|AC004221.2|AC004221 Homo sapiens DNA from chromosome 19, cosmid R29144 (LLNLR-252D12) and overlapping PCR product, complete sequence Length = 42805 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 29083 gcagcggcggcggccgcagcg 29063
>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0030G18 Length = 167557 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcag 332 ||||||||||||||||||||| Sbjct: 50772 gcggcggcggccgcagcgcag 50752
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 87418 cgccgccgcctgccgccgccg 87438
>gb|AY703686.1| Chyphotes mellipes abdominal-A (abd-A) gene, exon 1 and partial cds Length = 594 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 atccgcggctgccgcagcggcggcggccg 324 |||||||||||| |||||||| ||||||| Sbjct: 129 atccgcggctgcagcagcggccgcggccg 157
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 19730 cgccgccgcctgccgccgccg 19750
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgccgccgcctgccgccgccg 79 ||||||||||||||||||||| Sbjct: 169242 cgccgccgcctgccgccgccg 169262
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 cccctcgccgccgcctgccgccgcc 78 ||||||||||||||| ||||||||| Sbjct: 56835 cccctcgccgccgccggccgccgcc 56859
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 cccctcgccgccgcctgccgccgcc 78 ||||||||||||||| ||||||||| Sbjct: 4091 cccctcgccgccgccggccgccgcc 4115
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagg 108 ||||||||||||||||||||| Sbjct: 98075 gaagggaagaggagggggagg 98055
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ccgccgcctgccgccgccgttgaag 85 |||||||||||||||||||| |||| Sbjct: 150505 ccgccgcctgccgccgccgtcgaag 150529
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 47 tcctcttcccctcgccgccgcctgccgccgccg 79 |||||||| ||||||||||||| |||||||||| Sbjct: 4511 tcctcttcgcctcgccgccgcc-gccgccgccg 4542
>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1224_G08 Length = 113496 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 gcggcggcggccgcagcgcag 332 ||||||||||||||||||||| Sbjct: 103264 gcggcggcggccgcagcgcag 103244
>dbj|AK119907.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-F08, full insert sequence Length = 1346 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 877 gcagcggcggcggccgcagcg 897
>gb|AC004551.1|AC004551 Homo sapiens 12q24.1 PAC RPCI1-71H24 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 162346 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tgaagggaagaggagggggag 107 ||||||||||||||||||||| Sbjct: 128914 tgaagggaagaggagggggag 128894
>dbj|AK103806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033146N17, full insert sequence Length = 1613 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 gcggcggcggccgcagcgcag 332 ||||||||||||||||||||| Sbjct: 341 gcggcggcggccgcagcgcag 361
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 3358 gcggctgcagcagcggcggcggcagcagc 3386
>dbj|AK070807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069P08, full insert sequence Length = 1312 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 47 tcctcttcccctcgccgccgcctgccgccgccg 79 |||||||| ||||||||||||| |||||||||| Sbjct: 35 tcctcttcgcctcgccgccgcc-gccgccgccg 66
>gb|AY103800.1| Zea mays PCO084138 mRNA sequence Length = 1079 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 gctgccgcagcggcggcggccgcag 327 |||||||| |||||||||||||||| Sbjct: 50 gctgccgcggcggcggcggccgcag 74
>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete sequence Length = 235928 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 gcatccgcggctgccgcagcggcgg 318 ||||||||||||||| ||||||||| Sbjct: 84206 gcatccgcggctgccacagcggcgg 84230
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcagc 328 |||||||| |||||||||||||| ||||| Sbjct: 88003 gcggctgcagcagcggcggcggcagcagc 87975
>gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603, complete sequence Length = 45617 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggagg 108 ||||||||||||||||||||| Sbjct: 21619 gaagggaagaggagggggagg 21599
>emb|AL954389.5| Mouse DNA sequence from clone RP23-321F18 on chromosome X, complete sequence Length = 25193 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 15269 gcagcggcggcggccgcagcg 15249
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 47 tcctcttcccctcgccgccgcctgccgccgccg 79 |||||||| ||||||||||||| |||||||||| Sbjct: 185995 tcctcttcgcctcgccgccgcc-gccgccgccg 186026
>dbj|D70849.1|MUSZIC3P2 Mouse mRNA for Zic3 protein, complete cds Length = 3509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gcagcggcggcggccgcagcg 329 ||||||||||||||||||||| Sbjct: 693 gcagcggcggcggccgcagcg 673
>dbj|AB042983.1| 'Flavobacterium' lutescens ORF1, ORF2, pcd, ORF4 genes, partial and complete cds Length = 6357 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 tccgcggctgccgcagcggcggcggccgc 325 |||||||||||||||||||| | |||||| Sbjct: 1332 tccgcggctgccgcagcggctgtggccgc 1304
>gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196532 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agagaagaagagaataatga 28 |||||||||||||||||||| Sbjct: 58012 agagaagaagagaataatga 57993
>ref|XM_635916.1| Dictyostelium discoideum hypothetical protein (DDB0218263), partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agaagagaataatgaatata 33 |||||||||||||||||||| Sbjct: 84 agaagagaataatgaatata 103
>ref|XM_512361.1| PREDICTED: Pan troglodytes DNA (cytosine-5-)-methyltransferase 1 (LOC455696), mRNA Length = 6597 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 5455 gaggagggggaggacgacaa 5474
>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete sequence Length = 185965 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 105245 aagggaagaggagggggagg 105226
>ref|NM_185137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2834 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ggctgccgcagcggcggcggccgc 325 ||||||||||||| |||||||||| Sbjct: 45 ggctgccgcagcgccggcggccgc 68
>ref|NM_187570.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 58 cctcgccgccgcccgccgccgccg 35
>ref|XM_466225.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cagcggcggcggccgcagcg 329 |||||||||||||||||||| Sbjct: 380 cagcggcggcggccgcagcg 399
>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence Length = 218917 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 85187 aagggaagaggagggggagg 85206
>ref|NM_192396.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 162 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tcgccgccgcctgccgccgc 77 |||||||||||||||||||| Sbjct: 73 tcgccgccgcctgccgccgc 54
>gb|AC166770.7| Mus musculus chromosome 1, clone RP23-205P24, complete sequence Length = 213942 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aagaagagaataatgaatat 32 |||||||||||||||||||| Sbjct: 95213 aagaagagaataatgaatat 95232
>ref|XM_473321.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 ggctgccgcagcggcggcggccgcagcg 329 |||||| |||||||||||||| |||||| Sbjct: 762 ggctgctgcagcggcggcggctgcagcg 735
>ref|XM_472361.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggcc 323 |||||||| ||||||||||||||| Sbjct: 250 gcggctgcggcagcggcggcggcc 227
>gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete sequence Length = 89468 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcctgctgctgccggta 165 |||||||||||||||||||| Sbjct: 600 gcggcctgctgctgccggta 619
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence Length = 203655 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 28313 aagggaagaggagggggagg 28294
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 52 ttcccctcgccgccgcctgccgccgccg 79 ||||||||||||||||| |||||||||| Sbjct: 46215 ttcccctcgccgccgcc-gccgccgccg 46241
>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete sequence Length = 235237 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cccctcgccgccgcctgccgccgc 77 ||||||||||||||| |||||||| Sbjct: 80573 cccctcgccgccgcccgccgccgc 80596
>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence Length = 187883 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggccgcag 327 ||||| || ||||||||||||||||||| Sbjct: 162223 gcggcggcagcagcggcggcggccgcag 162196
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 52 ttcccctcgccgccgcctgccgccgccg 79 ||||||||||||||||| |||||||||| Sbjct: 151168 ttcccctcgccgccgcc-gccgccgccg 151142
>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence Length = 163116 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ctgccgcagcggcggcggcc 323 |||||||||||||||||||| Sbjct: 26140 ctgccgcagcggcggcggcc 26159
>ref|XM_592483.2| PREDICTED: Bos taurus similar to insulin receptor substrate 4 (LOC514607), mRNA Length = 5439 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 ccgcggctgccgcagcggcggcggccgc 325 ||||||| || ||||||||||||||||| Sbjct: 371 ccgcggcggctgcagcggcggcggccgc 398
>ref|XM_359984.1| Magnaporthe grisea 70-15 hypothetical protein (MG05359.4) partial mRNA Length = 2442 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 gccgcagcggcggcggccgcagcg 329 ||||||||||||||||| |||||| Sbjct: 1463 gccgcagcggcggcggcggcagcg 1486
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gcgcggcgcatccgcggctg 306 |||||||||||||||||||| Sbjct: 2217471 gcgcggcgcatccgcggctg 2217490
>ref|NM_009820.2| Mus musculus runt related transcription factor 2 (Runx2), mRNA Length = 5695 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggccgcag 327 ||||| || ||||||||||||||||||| Sbjct: 466 gcggcggcagcagcggcggcggccgcag 493
>ref|NM_031166.1| Mus musculus inhibitor of DNA binding 4 (Id4), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cgcggctgccgcagcggcggcggc 322 |||||| ||||||||||||||||| Sbjct: 215 cgcggccgccgcagcggcggcggc 192
>gb|BC055734.1| Mus musculus hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:66996 IMAGE:6810355), complete cds Length = 2888 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 |||||||| |||||||||||||||||| Sbjct: 61 gacctggtcttcgccaagatgaagggct 88
>ref|XM_324197.1| Neurospora crassa OR74A hypothetical protein (NCU04841.1) partial mRNA Length = 2238 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 2012 gctgccgcagcggcggcggc 1993
>gb|BC037107.1| Mus musculus adenylate cyclase 2, mRNA (cDNA clone MGC:47193 IMAGE:5367175), complete cds Length = 3980 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 cccctcgccgccgcctgccgccgc 77 ||||||||||||||| |||||||| Sbjct: 90 cccctcgccgccgcccgccgccgc 67
>gb|BC000733.2| Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa, mRNA (cDNA clone MGC:2053 IMAGE:3504640), complete cds Length = 1119 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 94 gaggagggggaggacgacaa 113
>ref|XM_955307.1| Neurospora crassa OR74A hypothetical protein (NCU04841.1) partial mRNA Length = 2238 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 2012 gctgccgcagcggcggcggc 1993
>ref|XM_955792.1| Neurospora crassa OR74A hypothetical protein (NCU06705.1) partial mRNA Length = 2040 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 1928 gctgccgcagcggcggcggc 1909
>ref|XM_326990.1| Neurospora crassa OR74A hypothetical protein (NCU06705.1) partial mRNA Length = 2040 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 1928 gctgccgcagcggcggcggc 1909
>ref|NM_013886.4| Mus musculus hepatoma-derived growth factor, related protein 3 (Hdgfrp3), mRNA Length = 5868 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 |||||||| |||||||||||||||||| Sbjct: 474 gacctggtcttcgccaagatgaagggct 501
>gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-251N15, complete sequence Length = 141783 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcagcggcggcggccgcagc 328 |||||||||||||||||||| Sbjct: 89354 gcagcggcggcggccgcagc 89373
>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete sequence Length = 180727 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 50429 agggaagaggagggggagga 50448
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 |||||||| |||||||||||||||||| Sbjct: 125769 gacctggtcttcgccaagatgaagggct 125796
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gagaagaagagaataatgaa 29 |||||||||||||||||||| Sbjct: 94056 gagaagaagagaataatgaa 94075
>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence Length = 176949 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 27106 agggaagaggagggggagga 27125
>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence Length = 205869 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 200997 aagggaagaggagggggagg 201016
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aaggccggcgacctggtgct 355 |||||||||||||||||||| Sbjct: 221410 aaggccggcgacctggtgct 221429
>ref|XM_387728.1| Gibberella zeae PH-1 chromosome 4 predicted protein (FG07552.1) partial mRNA Length = 2748 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaagaggagggggaggacga 112 |||||||||||||||||||| Sbjct: 2653 gaagaggagggggaggacga 2672
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 170129 agggaagaggagggggagga 170148
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cgcggctgccgcagcggcggcggc 322 |||||| ||||||||||||||||| Sbjct: 90613 cgcggccgccgcagcggcggcggc 90590
>ref|XM_814671.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506825.219) partial mRNA Length = 2100 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaagaggagggggaggacga 112 |||||||||||||||||||| Sbjct: 772 gaagaggagggggaggacga 791
>ref|XM_815899.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508175.114) partial mRNA Length = 2088 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaagaggagggggaggacga 112 |||||||||||||||||||| Sbjct: 772 gaagaggagggggaggacga 791
>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete sequence Length = 215829 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 177381 aagggaagaggagggggagg 177400
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 162096 agggaagaggagggggagga 162115
>gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 complete sequence Length = 60145 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcctgctgctgccggta 165 |||||||||||||||||||| Sbjct: 600 gcggcctgctgctgccggta 619
>ref|XM_722499.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00890) partial mRNA Length = 1311 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 aaagagaagaagagaataatgaat 30 ||||| |||||||||||||||||| Sbjct: 761 aaagaaaagaagagaataatgaat 784
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 gacctggtgctcgccaagatgaagggct 372 |||||||| |||||||||||||||||| Sbjct: 22119 gacctggtcttcgccaagatgaagggct 22146
>gb|AC120540.6| Mus musculus chromosome 12, clone RP23-460P20, complete sequence Length = 172662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gaagggaagaggagggggag 107 |||||||||||||||||||| Sbjct: 44008 gaagggaagaggagggggag 43989
>gb|BC062339.1| Homo sapiens alkB, alkylation repair homolog 5 (E. coli), mRNA (cDNA clone MGC:71143 IMAGE:6339184), complete cds Length = 2992 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggcc 323 |||||||| ||||||||||||||| Sbjct: 379 gcggctgcggcagcggcggcggcc 356
>emb|AL591363.4| Human DNA sequence from clone RP11-45P22 on chromosome 10 Contains a peptidylprolyl isomerase A (cyclophilin A) (CYPA, CYPH) (PPIA) pseudogene and a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (KCIP-1) (YWHAZ) pseudogene, complete sequence Length = 115806 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ccaagatgaagggcttcccc 377 |||||||||||||||||||| Sbjct: 108509 ccaagatgaagggcttcccc 108528
>ref|XM_783588.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box protein G1B (Forkhead-related protein FKHL1) (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) (LOC583688), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 1058 gctgccgcagcggcggcggc 1039
>ref|XM_499829.1| Yarrowia lipolytica CLIB122, YALI0A06974g predicted mRNA Length = 1119 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 gtggaaggccggcgacctggtgct 355 ||||||||||||||| |||||||| Sbjct: 981 gtggaaggccggcgatctggtgct 1004
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cagcggcggcggccgcagcg 329 |||||||||||||||||||| Sbjct: 3111747 cagcggcggcggccgcagcg 3111728
>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2 novel genes, complete sequence Length = 144792 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 90219 aagggaagaggagggggagg 90200
>emb|AL162494.10| Human DNA sequence from clone RP11-417I19 on chromosome 13, complete sequence Length = 77808 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gagaataatgaatatactgt 37 |||||||||||||||||||| Sbjct: 59042 gagaataatgaatatactgt 59061
>emb|X16134.1|DMABDBP3 Drosophila Abd-B P3 mRNA Length = 3885 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ctgccgcagcggcggcggcc 323 |||||||||||||||||||| Sbjct: 1612 ctgccgcagcggcggcggcc 1631
>emb|X56465.1|HSZNF Human znf6 mRNA for zinc finger transcription factor Length = 3455 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gccgccgcctgccgccgccg 79 |||||||||||||||||||| Sbjct: 658 gccgccgcctgccgccgccg 639
>emb|X54046.1|OSPCNAGEN Rice (O. sativa) gene for proliferating cell nuclear antigen (PCNA) Length = 4556 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcttcccctcgccgccgcct 69 |||||||||||||||||||| Sbjct: 1477 tcttcccctcgccgccgcct 1496
>emb|X51663.1|DMABDBCLA D.melanogaster RNA for Abd-B gene, classA Length = 4771 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ctgccgcagcggcggcggcc 323 |||||||||||||||||||| Sbjct: 2470 ctgccgcagcggcggcggcc 2489
>emb|X15080.1|DMBX189B Drosophila pH189 mRNA of distal BX-C region (bithorax complex) coding for homeoprotein (confering r element function) Length = 2389 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ctgccgcagcggcggcggcc 323 |||||||||||||||||||| Sbjct: 1264 ctgccgcagcggcggcggcc 1283
>emb|CR457134.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0412D for gene EIF3S4, eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa; complete cds, incl. stopcodon Length = 963 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 52 gaggagggggaggacgacaa 71
>emb|AL683873.14| Mouse DNA sequence from clone RP23-119G22 on chromosome 13 Contains part of a novel gene, complete sequence Length = 104602 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctagctggttgctgggaga 263 |||||||||||||||||||| Sbjct: 83417 gctagctggttgctgggaga 83398
>gb|AC164436.2| Mus musculus BAC clone RP23-134C5 from chromosome 14, complete sequence Length = 220260 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aagggaagaggagggggagg 108 |||||||||||||||||||| Sbjct: 6447 aagggaagaggagggggagg 6428
>emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmid contig 7F4 Length = 115416 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 86445 gctgccgcagcggcggcggc 86464
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 ggctgccgcagcggcggcggccgcagcg 329 |||||| |||||||||||||| |||||| Sbjct: 11672 ggctgctgcagcggcggcggctgcagcg 11645
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcggctgccgcagcggcggcggcc 323 |||||||| ||||||||||||||| Sbjct: 133072 gcggctgcggcagcggcggcggcc 133095
>emb|AL596386.16| Mouse DNA sequence from clone RP23-331I21 on chromosome 11 Contains the 3' end of the Myo15 gene for myosin XV, a novel gene, eleven ubiquitin pseudogenes, four poly A binding protein, cytoplasmic 4 (Pabpc4) pseudogenes and a CpG island, complete sequence Length = 201663 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggctgccgcagcggcggcggcc 323 ||||| |||||||||||||||||| Sbjct: 54601 gcggcggccgcagcggcggcggcc 54578
>emb|AL604029.12| Mouse DNA sequence from clone RP23-155J3 on chromosome 11 Contains an H3 histone family 3A (H3f3a) pseudogene, the Zfp179 gene for zinc finger protein 179, the gene for the possible ortholog of H. sapiens microfibrillar-associated protein 4 (MFAP4) (1110007F23Rik), the Mapk7 gene for mitogen-activated kinase 7, a novel gene (3110043A19Rik), the Eppb9 gene for endothelial precursor protein B9, the Epn2 gene for epsin 2, a novel gene and three CpG islands, complete sequence Length = 204653 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 23617 agggaagaggagggggagga 23636
>gb|BT007572.1| Synthetic construct Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa mRNA, partial cds Length = 963 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 52 gaggagggggaggacgacaa 71
>gb|BT006889.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 52 gaggagggggaggacgacaa 71
>emb|AL833381.1|HSM804694 Homo sapiens mRNA; cDNA DKFZp667L2214 (from clone DKFZp667L2214) Length = 3780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tgtaagtaaaattcctcttc 54 |||||||||||||||||||| Sbjct: 1575 tgtaagtaaaattcctcttc 1556
>gb|AC012537.12| Homo sapiens chromosome 8, clone RP11-115A18, complete sequence Length = 157030 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 31065 agggaagaggagggggagga 31046
>gb|AY236073.2| Klebsiella pneumoniae strain 11978 insertion sequence IS1999, complete sequence Length = 6138 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcctgctgctgccggta 165 |||||||||||||||||||| Sbjct: 671 gcggcctgctgctgccggta 652
>gb|AC022182.8| Homo sapiens chromosome 8, clone RP11-174G1, complete sequence Length = 172420 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agggaagaggagggggagga 109 |||||||||||||||||||| Sbjct: 49096 agggaagaggagggggagga 49115
>dbj|AB069968.1| Oryza sativa (japonica cultivar-group) OsCLC-2 gene for chloride channel, paritial cds Length = 6803 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cagcggcggcggccgcagcg 329 |||||||||||||||||||| Sbjct: 602 cagcggcggcggccgcagcg 621
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctcgccgccgcctgccgccgccg 79 ||||||||||||| |||||||||| Sbjct: 36827 cctcgccgccgcccgccgccgccg 36804
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgccgcagcggcggcggc 322 |||||||||||||||||||| Sbjct: 89855 gctgccgcagcggcggcggc 89836
>emb|CR616432.1| full-length cDNA clone CS0DC023YC13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1079 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 86 gaggagggggaggacgacaa 105
>emb|CR613864.1| full-length cDNA clone CS0DF026YE01 of Fetal brain of Homo sapiens (human) Length = 1774 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 86 gaggagggggaggacgacaa 105
>emb|CR611551.1| full-length cDNA clone CS0DC016YD01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaggagggggaggacgacaa 115 |||||||||||||||||||| Sbjct: 82 gaggagggggaggacgacaa 101 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,271,377 Number of Sequences: 3902068 Number of extensions: 5271377 Number of successful extensions: 183508 Number of sequences better than 10.0: 395 Number of HSP's better than 10.0 without gapping: 408 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 174467 Number of HSP's gapped (non-prelim): 9061 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
