ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08c08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 3 aagctggacacctacgccatggagcgggtggcgctgctccgcacctccggccgccgcctc 62 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 32080827 aagctggacacctgcgccatggagcgggtggcgctgctccgcaactccggccgccgcctc 32080886 Query: 63 ctccagcgctgcggcaggcccaggcccctcgt 94 ||||| |||||| || ||||||||||| |||| Sbjct: 32080887 ctccaccgctgccgccggcccaggcccgtcgt 32080918 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 204 ctgcactccgcggggcggtactggccgctcaccgcgcccggcctcgcgaggcgcctctcc 263 ||||||| ||| |||||||||||||||| | ||||||| || ||| ||||||||||| Sbjct: 32081019 ctgcactgcgccgggcggtactggccgcacgccgcgcctcgcttcgtccggcgcctctcc 32081078 Query: 264 gtccccgccgtctccacctcgccctcccctgtgcccag 301 | ||| ||||| ||||| |||||||| || |||||||| Sbjct: 32081079 gcccctgccgtgtccacgtcgccctcacccgtgcccag 32081116 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 315 gtccatgagtatgcggcaacgctaggctttgaaaaggtatctgaaca 361 |||||||||||||| |||| | |||| ||||| |||||||||||||| Sbjct: 32081494 gtccatgagtatgctgcaaagttagggtttgagaaggtatctgaaca 32081540 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 30401308 gccgccgcctcctccagcgc 30401289
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0486G03 Length = 146713 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 3 aagctggacacctacgccatggagcgggtggcgctgctccgcacctccggccgccgcctc 62 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 17483 aagctggacacctgcgccatggagcgggtggcgctgctccgcaactccggccgccgcctc 17542 Query: 63 ctccagcgctgcggcaggcccaggcccctcgt 94 ||||| |||||| || ||||||||||| |||| Sbjct: 17543 ctccaccgctgccgccggcccaggcccgtcgt 17574 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 204 ctgcactccgcggggcggtactggccgctcaccgcgcccggcctcgcgaggcgcctctcc 263 ||||||| ||| |||||||||||||||| | ||||||| || ||| ||||||||||| Sbjct: 17675 ctgcactgcgccgggcggtactggccgcacgccgcgcctcgcttcgtccggcgcctctcc 17734 Query: 264 gtccccgccgtctccacctcgccctcccctgtgcccag 301 | ||| ||||| ||||| |||||||| || |||||||| Sbjct: 17735 gcccctgccgtgtccacgtcgccctcacccgtgcccag 17772 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 315 gtccatgagtatgcggcaacgctaggctttgaaaaggtatctgaaca 361 |||||||||||||| |||| | |||| ||||| |||||||||||||| Sbjct: 18150 gtccatgagtatgctgcaaagttagggtttgagaaggtatctgaaca 18196
>ref|XM_478923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1532 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 cgcgcctcctggccgcggccgcg 194 ||||||||||||||||||||||| Sbjct: 473 cgcgcctcctggccgcggccgcg 495
>gb|AE009332.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 102 of 187 of the complete sequence Length = 10029 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 232 tcaccgcgcccggcctcgcgagg 254 ||||||||||||||||||||||| Sbjct: 4184 tcaccgcgcccggcctcgcgagg 4162
>gb|AE008282.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 86 of 187 of the complete sequence Length = 10339 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 232 tcaccgcgcccggcctcgcgagg 254 ||||||||||||||||||||||| Sbjct: 7441 tcaccgcgcccggcctcgcgagg 7463
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 ccgcctcctccagcgctgcggca 78 ||||||||||||||||||||||| Sbjct: 247136 ccgcctcctccagcgctgcggca 247158
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 cgcgcctcctggccgcggccgcg 194 ||||||||||||||||||||||| Sbjct: 23831516 cgcgcctcctggccgcggccgcg 23831538 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 ccacctcgccctcccctgtgcc 298 |||||||||||||||||||||| Sbjct: 17383467 ccacctcgccctcccctgtgcc 17383488 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 3477288 ccgccgtctccacctcgccc 3477269
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 cgcgcctcctggccgcggccgcg 194 ||||||||||||||||||||||| Sbjct: 20016 cgcgcctcctggccgcggccgcg 20038
>dbj|AK107187.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H10, full insert sequence Length = 1532 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 cgcgcctcctggccgcggccgcg 194 ||||||||||||||||||||||| Sbjct: 473 cgcgcctcctggccgcggccgcg 495
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcgctgcggcaggcccaggc 87 |||||||||||||||||||||| Sbjct: 1883306 cagcgctgcggcaggcccaggc 1883327
>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172105 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 tgcccagcgacaccgacgatgt 316 |||||||||||||||||||||| Sbjct: 11894 tgcccagcgacaccgacgatgt 11915
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 tgcccagcgacaccgacgatgt 316 |||||||||||||||||||||| Sbjct: 54388 tgcccagcgacaccgacgatgt 54409
>ref|NM_132589.2| Drosophila melanogaster CG15727-RA (CG15727), mRNA Length = 1165 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 tgcccagcgacaccgacgatgt 316 |||||||||||||||||||||| Sbjct: 346 tgcccagcgacaccgacgatgt 367
>gb|AY071046.1| Drosophila melanogaster RE13534 full length cDNA Length = 1183 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 tgcccagcgacaccgacgatgt 316 |||||||||||||||||||||| Sbjct: 346 tgcccagcgacaccgacgatgt 367
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 ccacctcgccctcccctgtgcc 298 |||||||||||||||||||||| Sbjct: 51691 ccacctcgccctcccctgtgcc 51712
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 cgccgccacctcctccgcgccg 119 |||||||||||||||||||||| Sbjct: 358386 cgccgccacctcctccgcgccg 358365
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 tgcccagcgacaccgacgatgt 316 |||||||||||||||||||||| Sbjct: 5234 tgcccagcgacaccgacgatgt 5213
>ref|XM_512776.1| PREDICTED: Pan troglodytes LOC456158 (LOC456158), mRNA Length = 2166 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cccgccgccacctcctccgcgccgc 120 ||||||| ||||||||||||||||| Sbjct: 351 cccgccgacacctcctccgcgccgc 375
>ref|XM_480397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 855 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgcgtcgccgct 129 |||||||||||||||| ||||||| |||||||| Sbjct: 401 ccgccgccacctcctcggcgccgc-tcgccgct 370
>ref|NM_196703.1| Oryza sativa (japonica cultivar-group) putative putative glucosyltransferase (OSJNBa0046P18.12), mRNA Length = 1512 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cgcccggcggctcgtcgcgcc 177 ||||||||||||||||||||| Sbjct: 1427 cgcccggcggctcgtcgcgcc 1447
>ref|XM_428778.1| PREDICTED: Gallus gallus similar to Terminal deoxynucleotidyltransferase interacting factor 1 (LOC431225), partial mRNA Length = 336 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 cggccgcgccgctgcacctgc 207 ||||||||||||||||||||| Sbjct: 50 cggccgcgccgctgcacctgc 30
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gccgccacctcctccgcgccg 119 ||||||||||||||||||||| Sbjct: 3239867 gccgccacctcctccgcgccg 3239847
>ref|XM_548677.2| PREDICTED: Canis familiaris similar to obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (LOC491556), mRNA Length = 4996 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ggccgccgcctcctccagcgc 71 ||||||||||||||||||||| Sbjct: 1824 ggccgccgcctcctccagcgc 1804
>emb|AL162274.17| Human DNA sequence from clone RP11-45A17 on chromosome 10 Contains the BNIP3 gene for BCL2/adenovirus E1B 19kD-interacting protein 3, the 5' end of a novel gene, possible ortholog of mouse RIKEN cDNA 6330417G02 geneand CpG islands, complete sequence Length = 148891 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 gtctccacctcgccctcccctgtgc 297 ||||||||||||||||||| ||||| Sbjct: 3487 gtctccacctcgccctcccgtgtgc 3463
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccacctcgccctcccctgtgc 297 ||||||||||||||||||||| Sbjct: 104794 ccacctcgccctcccctgtgc 104774
>emb|AL607072.15| Mouse DNA sequence from clone RP23-81E16 on chromosome 11 Contains the 3' end of the Ssh2 gene for slingshot homolog 2 (Drosophila), the Coro6 gene for coronin actin binding protein 6, a novel gene, the Git1 gene for G protein-coupled receptor kinase-interactor 1 and the 3' end of a novel gene, complete sequence Length = 90029 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 gctgctccgcacctccggccgccgcctcc 63 |||||||||| ||||| |||||||||||| Sbjct: 71392 gctgctccgcgcctcccgccgccgcctcc 71364
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccacctcgccctcccctgtgc 297 ||||||||||||||||||||| Sbjct: 32817 ccacctcgccctcccctgtgc 32797
>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence Length = 237498 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 gctgctccgcacctccggccgccgcctcc 63 |||||||||| ||||| |||||||||||| Sbjct: 39291 gctgctccgcgcctcccgccgccgcctcc 39319
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 gcccgccgccacctcctccgcgccg 119 ||||||||||||||||||| ||||| Sbjct: 5956 gcccgccgccacctcctccccgccg 5932
>emb|BX647339.1|HSM807483 Homo sapiens mRNA; cDNA DKFZp779L1016 (from clone DKFZp779L1016) Length = 2198 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gtctccacctcgccctcccctgtgc 297 ||||||||||||||||||| ||||| Sbjct: 265 gtctccacctcgccctcccgtgtgc 289
>dbj|AK125699.1| Homo sapiens cDNA FLJ43711 fis, clone TESOP2003273 Length = 2138 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gtctccacctcgccctcccctgtgc 297 ||||||||||||||||||| ||||| Sbjct: 806 gtctccacctcgccctcccgtgtgc 830
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ctccggccgccgcctcctcca 67 ||||||||||||||||||||| Sbjct: 97463 ctccggccgccgcctcctcca 97443
>emb|BX934027.2| Gallus gallus finished cDNA, clone ChEST54d17 Length = 1028 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 cggccgcgccgctgcacctgc 207 ||||||||||||||||||||| Sbjct: 183 cggccgcgccgctgcacctgc 163
>emb|BX934009.2| Gallus gallus finished cDNA, clone ChEST58m18 Length = 1031 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 cggccgcgccgctgcacctgc 207 ||||||||||||||||||||| Sbjct: 181 cggccgcgccgctgcacctgc 161
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccacctcgccctcccctgtgc 297 ||||||||||||||||||||| Sbjct: 30629086 ccacctcgccctcccctgtgc 30629066
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 gctgctccgcacctccggccgccgcctcc 63 ||||||| ||||||||||||||| ||||| Sbjct: 11168510 gctgctcagcacctccggccgccacctcc 11168482 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||| ||||||||||||||| Sbjct: 18402006 ccgccgcctcctcctccgcgccgc 18401983 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 cgtgcccgccgccacctcctccgcgccg 119 ||||||| ||||||||||||||||||| Sbjct: 2585336 cgtgccccacgccacctcctccgcgccg 2585309
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgcccggcggctcgtcgcgcc 177 ||||||||||||||||||||| Sbjct: 15379982 cgcccggcggctcgtcgcgcc 15379962 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 15980827 ccgccgcctcctccagcgct 15980846
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctccggccgccgcctcctcca 67 ||||||||||||||||||||| Sbjct: 6332195 ctccggccgccgcctcctcca 6332215 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gcctcctggccgcggccgcgccgc 198 |||||||| ||||||||||||||| Sbjct: 16929107 gcctcctgtccgcggccgcgccgc 16929130
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 97 ccgccgccacctcctccgcgccgcgtcgccgct 129 |||||||||||||||| ||||||| |||||||| Sbjct: 4876316 ccgccgccacctcctcggcgccgc-tcgccgct 4876347 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||||||| ||||||| Sbjct: 3424290 ccgccgccacctcctcggcgccgc 3424267
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccacctcgccctcccctgtgc 297 ||||||||||||||||||||| Sbjct: 25828156 ccacctcgccctcccctgtgc 25828176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cgccgccacctcctccgcgc 117 |||||||||||||||||||| Sbjct: 15520422 cgccgccacctcctccgcgc 15520441
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 gcccgccgccacctcctccgcgccg 119 ||||||||||||||||||| ||||| Sbjct: 39451514 gcccgccgccacctcctccccgccg 39451490
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgcccggcggctcgtcgcgcc 177 ||||||||||||||||||||| Sbjct: 97345 cgcccggcggctcgtcgcgcc 97325
>gb|AC008755.8| Homo sapiens chromosome 19 clone CTD-3026N16, complete sequence Length = 203912 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cccgccgccacctcctccgcgccgc 120 ||||||| ||||||||||||||||| Sbjct: 48410 cccgccgacacctcctccgcgccgc 48434
>gb|AC144788.3| Ornithorhynchus anatinus clone OA_Bb-63M19, complete sequence Length = 122867 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cctccggccgccgcctcctcc 66 ||||||||||||||||||||| Sbjct: 106562 cctccggccgccgcctcctcc 106542
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 gcccgccgccacctcctccgcgccg 119 ||||||||||||||||||| ||||| Sbjct: 26528 gcccgccgccacctcctccccgccg 26504
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctccggccgccgcctcctcca 67 ||||||||||||||||||||| Sbjct: 64474 ctccggccgccgcctcctcca 64494
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccacctcgccctcccctgtgc 297 ||||||||||||||||||||| Sbjct: 110360 ccacctcgccctcccctgtgc 110380
>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete sequences Length = 185079 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 aggcccaggcccctcgtgccc 98 ||||||||||||||||||||| Sbjct: 120317 aggcccaggcccctcgtgccc 120337
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 97 ccgccgccacctcctccgcgccgcgtcgccgct 129 |||||||||||||||| ||||||| |||||||| Sbjct: 35570 ccgccgccacctcctcggcgccgc-tcgccgct 35601
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 97 ccgccgccacctcctccgcgccgcgtcgccgct 129 |||||||||||||||| ||||||| |||||||| Sbjct: 81110 ccgccgccacctcctcggcgccgc-tcgccgct 81141
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 aggcccaggcccctcgtgccc 98 ||||||||||||||||||||| Sbjct: 24503 aggcccaggcccctcgtgccc 24523
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cgcccggcggctcgtcgcgcc 177 ||||||||||||||||||||| Sbjct: 15388223 cgcccggcggctcgtcgcgcc 15388203 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 15989068 ccgccgcctcctccagcgct 15989087
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 gctgctccgcacctccggccgccgcctcc 63 ||||||| ||||||||||||||| ||||| Sbjct: 11168181 gctgctcagcacctccggccgccacctcc 11168153 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||| ||||||||||||||| Sbjct: 18328232 ccgccgcctcctcctccgcgccgc 18328209 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 cgtgcccgccgccacctcctccgcgccg 119 ||||||| ||||||||||||||||||| Sbjct: 2585280 cgtgccccacgccacctcctccgcgccg 2585253
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 gctgctccgcacctccggccgccgcctcc 63 ||||||| ||||||||||||||| ||||| Sbjct: 17663 gctgctcagcacctccggccgccacctcc 17691
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108805 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 gctgctccgcacctccggccgccgcctcc 63 ||||||| ||||||||||||||| ||||| Sbjct: 88148 gctgctcagcacctccggccgccacctcc 88176
>gb|AY886764.1| Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3 (BNIP3) gene, complete cds Length = 18186 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gtctccacctcgccctcccctgtgc 297 ||||||||||||||||||| ||||| Sbjct: 14377 gtctccacctcgccctcccgtgtgc 14401
>dbj|AP001479.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f94F12, telomere region, complete sequence Length = 38936 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 aggcccaggcccctcgtgccc 98 ||||||||||||||||||||| Sbjct: 15227 aggcccaggcccctcgtgccc 15247
>ref|NM_001348.1| Homo sapiens death-associated protein kinase 3 (DAPK3), mRNA Length = 2105 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1096 cggccgccgcctcctccagc 1077
>ref|XM_512278.1| PREDICTED: Pan troglodytes death-associated protein kinase 3 (LOC455594), mRNA Length = 2613 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 2251 cggccgccgcctcctccagc 2232
>ref|XM_467603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 692 gccgccgcctcctccagcgc 673
>ref|XM_506952.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.24 mRNA Length = 1710 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 1189 gccgccgcctcctccagcgc 1170
>ref|NM_196786.1| Oryza sativa (japonica cultivar-group) putative glycine-rich protein (OSJNBa0068N06.35), mRNA Length = 558 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 101 ccgccgcctcctccagcgct 82
>ref|NM_186442.2| Oryza sativa (japonica cultivar-group), mRNA Length = 631 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 180 ccgccgtctccacctcgccc 161
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gtccccgccgtctccacctc 283 |||||||||||||||||||| Sbjct: 33139 gtccccgccgtctccacctc 33158
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence Length = 163517 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ctcgtcgcccggcggctcgt 171 |||||||||||||||||||| Sbjct: 33524 ctcgtcgcccggcggctcgt 33543
>gb|BC004181.2| Homo sapiens RNA binding motif protein 10, transcript variant 1, mRNA (cDNA clone MGC:2794 IMAGE:2961094), complete cds Length = 3409 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 176 tgcccgccgccacctcctcc 157
>gb|BC001442.2| Homo sapiens ring finger protein 126, transcript variant 1, mRNA (cDNA clone MGC:1022 IMAGE:3138961), complete cds Length = 1431 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 83 ccgccgccacctactccgcgccgc 60
>gb|BC008733.2| Homo sapiens RNA binding motif protein 10, transcript variant 1, mRNA (cDNA clone MGC:997 IMAGE:3163064), complete cds Length = 3414 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 208 tgcccgccgccacctcctcc 189
>gb|BC003089.1| Homo sapiens RNA binding motif protein 10, transcript variant 2, mRNA (cDNA clone MGC:1132 IMAGE:3536058), complete cds Length = 3143 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 162 tgcccgccgccacctcctcc 143
>ref|XM_864471.1| PREDICTED: Bos taurus similar to leucine-rich repeats and calponin homology (CH) domain containing 3 (LOC613550), mRNA Length = 492 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 172 ccgccgcctcctccagcgct 153
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacctccggccgccgcctcc 63 |||||||||||||||||||| Sbjct: 58075 cacctccggccgccgcctcc 58056
>ref|NM_194460.1| Homo sapiens ring finger protein 126 (RNF126), transcript variant 2, mRNA Length = 1658 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 104 ccgccgccacctactccgcgccgc 81
>ref|NM_017876.3| Homo sapiens ring finger protein 126 (RNF126), transcript variant 1, mRNA Length = 1457 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 104 ccgccgccacctactccgcgccgc 81
>ref|NM_152856.1| Homo sapiens RNA binding motif protein 10 (RBM10), transcript variant 2, mRNA Length = 3190 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 209 tgcccgccgccacctcctcc 190
>ref|NM_005676.3| Homo sapiens RNA binding motif protein 10 (RBM10), transcript variant 1, mRNA Length = 3415 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 209 tgcccgccgccacctcctcc 190
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggccgcggccgcgccgctgc 201 |||||||||||||||||||| Sbjct: 76876 ggccgcggccgcgccgctgc 76857
>gb|AY554029.1| Oryza sativa (japonica cultivar-group) clone R4057 Hox16 (hox16) mRNA, complete cds Length = 1199 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 543 gccgccgcctcctccagcgc 524
>gb|AY559045.1| Oryza sativa homeodomain leucine zipper protein 16 (hox16) mRNA, complete cds Length = 1472 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 778 gccgccgcctcctccagcgc 759
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 cgccacctcctccgcgccgcgtcgccgc 128 ||||||| ||||||||||||| |||||| Sbjct: 17671976 cgccaccgcctccgcgccgcgccgccgc 17672003
>ref|XM_849352.1| PREDICTED: Canis familiaris similar to CG5765-PA (LOC611657), mRNA Length = 912 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctccgcgccgcgtcgccg 127 |||||||||||||||||||| Sbjct: 726 tcctccgcgccgcgtcgccg 745 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctccgcgccgcgtcgccg 127 |||||||||||||||||||| Sbjct: 684 tcctccgcgccgcgtcgccg 703 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctccgcgccgcgtcgccg 127 |||||||||||||||||||| Sbjct: 642 tcctccgcgccgcgtcgccg 661 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctccgcgccgcgtcgccg 127 |||||||||||||||||||| Sbjct: 558 tcctccgcgccgcgtcgccg 577 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctccgcgccgcgtcgccg 127 |||||||||||||||||||| Sbjct: 474 tcctccgcgccgcgtcgccg 493
>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence Length = 153028 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 26086 tgcccgccgccacctcctcc 26067
>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete sequence Length = 136916 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 cgccacctcctccgcgccgcgtcgccgc 128 ||||||| ||||||||||||| |||||| Sbjct: 112031 cgccaccgcctccgcgccgcgccgccgc 112004
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gccgcggccgcgccgctgca 202 |||||||||||||||||||| Sbjct: 181914 gccgcggccgcgccgctgca 181895
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN gene for regucalcin (senescence marker protein-30) (RC, SMP30), the gene for neuronal protein 17.3 (P17.3), the RBM10 gene for RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122), an inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1 gene for ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for PCTAIRE protein kinase 1 and five CpG islands, complete sequence Length = 145456 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 70485 tgcccgccgccacctcctcc 70466
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cgcggccgcgccgctgcacc 204 |||||||||||||||||||| Sbjct: 1311736 cgcggccgcgccgctgcacc 1311755
>gb|AE008751.1| Salmonella typhimurium LT2, section 55 of 220 of the complete genome Length = 20753 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 5056 cgcggggcggtactggccgc 5075
>emb|X52094.1|STFLGFG Salmonella typhimurium flgF and flgG genes for putative (FlgF) and known (FlgG) flagellar basal-body rod proteins Length = 1687 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 625 cgcggggcggtactggccgc 644
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 1619956 tgcccgccgccacctcctcc 1619937
>emb|BX537969.1|HSM806098 Homo sapiens mRNA; cDNA DKFZp686E2459 (from clone DKFZp686E2459); complete cds Length = 3408 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 174 tgcccgccgccacctcctcc 155
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccgcggccgcgccgctgcac 203 |||||||||||||||||||| Sbjct: 137896 ccgcggccgcgccgctgcac 137915
>dbj|AK097643.1| Homo sapiens cDNA FLJ40324 fis, clone TESTI2031006, highly similar to Homo sapiens mRNA for ZIP-kinase Length = 2118 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1111 cggccgccgcctcctccagc 1092
>gb|AC011488.7| Homo sapiens chromosome 19 clone CTB-171N13, complete sequence Length = 134308 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 109034 cggccgccgcctcctccagc 109053
>emb|CR613869.1| full-length cDNA clone CS0DC028YA13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1596 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 86 ccgccgccacctactccgcgccgc 63
>dbj|AK093792.1| Homo sapiens cDNA FLJ36473 fis, clone THYMU2016840, highly similar to Homo sapiens mRNA for ZIP-kinase Length = 2067 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1053 cggccgccgcctcctccagc 1034
>dbj|AK091795.1| Homo sapiens cDNA FLJ34476 fis, clone HLUNG2003778 Length = 2026 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 1054 tgcccgccgccacctcctcc 1073
>dbj|AK074799.1| Homo sapiens cDNA FLJ90318 fis, clone NT2RP2001529, highly similar to Homo sapiens mRNA for ZIP-kinase Length = 2079 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1072 cggccgccgcctcctccagc 1053
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 152351 ccgccgcctcctccagcgct 152370
>dbj|AK027590.1| Homo sapiens cDNA FLJ14684 fis, clone NT2RP2004933, highly similar to Homo sapiens mRNA for ZIP-kinase Length = 2224 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1217 cggccgccgcctcctccagc 1198
>dbj|AK000962.1| Homo sapiens cDNA FLJ10100 fis, clone HEMBA1002469, moderately similar to DXS8237E PROTEIN Length = 1451 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 191 tgcccgccgccacctcctcc 172
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ccgcgccgctgcacctgcac 209 |||||||||||||||||||| Sbjct: 1643935 ccgcgccgctgcacctgcac 1643916
>ref|NM_138100.2| Drosophila melanogaster CG4707-RA (CG4707), mRNA Length = 2244 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ctcgtcgcccggcggctcgt 171 |||||||||||||||||||| Sbjct: 1761 ctcgtcgcccggcggctcgt 1742
>dbj|D50912.1| Homo sapiens mRNA for KIAA0122 gene, partial cds Length = 3244 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 74 tgcccgccgccacctcctcc 55
>gb|AC104530.2| Homo sapiens chromosome 19 clone LLNL-FOS_25H9, complete sequence Length = 22752 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 5914 tgcccgccgccacctcctcc 5933
>ref|XM_939777.1| PREDICTED: Homo sapiens similar to leucine rich repeat neuronal 6C (LOC650691), mRNA Length = 1996 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 724 tgcccgccgccacctcctcc 705
>ref|XM_928228.1| PREDICTED: Homo sapiens similar to leucine rich repeat neuronal 6C (LOC645191), mRNA Length = 1996 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 724 tgcccgccgccacctcctcc 705
>gb|AY051772.1| Drosophila melanogaster LD29879 full length cDNA Length = 2226 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ctcgtcgcccggcggctcgt 171 |||||||||||||||||||| Sbjct: 1723 ctcgtcgcccggcggctcgt 1704
>gb|AC004152.1|AC004152 Homo sapiens chromosome 19, fosmid 37308, complete sequence Length = 37635 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 36251 tgcccgccgccacctcctcc 36270
>gb|AY335738.1| Synthetic construct Homo sapiens death-associated protein kinase 3 (DAPK3) mRNA, partial cds Length = 1365 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1003 cggccgccgcctcctccagc 984
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggccgcggccgcgccgctgc 201 |||||||||||||||||||| Sbjct: 25201606 ggccgcggccgcgccgctgc 25201587 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gtccccgccgtctccacctc 283 |||||||||||||||||||| Sbjct: 12865803 gtccccgccgtctccacctc 12865822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 cgccacctcctccgcgccgcgtcgccgc 128 ||||||| ||||||||||||| |||||| Sbjct: 17665517 cgccaccgcctccgcgccgcgccgccgc 17665544
>dbj|AB190989.1| Sphingomonas paucimobilis desB gene for gallate dioxygenase, complete cds Length = 3874 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccggcggctcgtcgcgcc 177 |||||||||||||||||||| Sbjct: 694 gcccggcggctcgtcgcgcc 713
>gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, region 60D-60D, BAC clone BACR11C07, complete sequence Length = 171151 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ctcgtcgcccggcggctcgt 171 |||||||||||||||||||| Sbjct: 140573 ctcgtcgcccggcggctcgt 140592
>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214432 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctccggccgccgcctcctcc 66 |||||||||||||||||||| Sbjct: 45670 ctccggccgccgcctcctcc 45651
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctccggccgccgcctcctcc 66 |||||||||||||||||||| Sbjct: 169766 ctccggccgccgcctcctcc 169747
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 7346114 cggccgccgcctcctccagc 7346095 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccccgccgtctccacctcgc 285 |||||||||||||||||||| Sbjct: 5005690 ccccgccgtctccacctcgc 5005709
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 179 cctggccgcggccgcgccgctgcacctg 206 ||||| ||||||||||||||||| |||| Sbjct: 2165190 cctgggcgcggccgcgccgctgctcctg 2165163 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggccgcgccgctgcacctgc 207 |||||||||||||||||||| Sbjct: 302962 ggccgcgccgctgcacctgc 302943
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 1737271 cgcggggcggtactggccgc 1737252
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cctcctggccgcggccgcgccgct 199 ||||||||||||||||||| |||| Sbjct: 7566203 cctcctggccgcggccgcggcgct 7566180
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gcctcctggccgcggccgcgccgc 198 |||||||| ||||||||||||||| Sbjct: 58920 gcctcctgtccgcggccgcgccgc 58943
>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633D04 Length = 159636 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cgccgccacctcctccgcgc 117 |||||||||||||||||||| Sbjct: 9755 cgccgccacctcctccgcgc 9774
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 117108 ccgccgtctccacctcgccc 117089
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 15238 ccgccgtctccacctcgccc 15219
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 82168 gccgccgcctcctccagcgc 82149
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 7356 gccgccgcctcctccagcgc 7337
>dbj|AK121664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066G06, full insert sequence Length = 811 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcctcctccagcgct 72 |||||||||||||||||||| Sbjct: 138 ccgccgcctcctccagcgct 119
>dbj|AK119592.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D05, full insert sequence Length = 1710 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 1189 gccgccgcctcctccagcgc 1170
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||||||| ||||||| Sbjct: 57709 ccgccgccacctcctcggcgccgc 57686
>dbj|AK000559.1| Homo sapiens cDNA FLJ20552 fis, clone KAT11732 Length = 1362 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 61 ccgccgccacctactccgcgccgc 38
>emb|AJ243806.1|CRE243806 Chlamydomonas reinhardtii dhc1 gene for 1-alpha dynein heavy chain Length = 23204 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 17161 gccgccgcctcctccagcgc 17142
>gb|U89234.1|U89234 Apaloderma vittatum 12S ribosomal RNA, mitochondrial gene Length = 951 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 ccgccgtctccacctcgccctccc 291 |||||||||||| ||||||||||| Sbjct: 642 ccgccgtctccagctcgccctccc 665
>dbj|AK107096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H07, full insert sequence Length = 1903 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 174 ccgccgtctccacctcgccc 155
>dbj|AK068378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146K16, full insert sequence Length = 1689 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gcctcctggccgcggccgcgccgc 198 |||||||| ||||||||||||||| Sbjct: 112 gcctcctgtccgcggccgcgccgc 89
>dbj|AK067008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093K13, full insert sequence Length = 2586 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cgccgccacctcctccgcgc 117 |||||||||||||||||||| Sbjct: 175 cgccgccacctcctccgcgc 194
>dbj|AK064748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E11, full insert sequence Length = 1174 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gtccccgccgtctccacctc 283 |||||||||||||||||||| Sbjct: 948 gtccccgccgtctccacctc 967
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacctccggccgccgcctcc 63 |||||||||||||||||||| Sbjct: 70247 cacctccggccgccgcctcc 70228
>dbj|AK063108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D04, full insert sequence Length = 625 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cgccgccacctcctccgcgc 117 |||||||||||||||||||| Sbjct: 123 cgccgccacctcctccgcgc 142
>dbj|AK059382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G04, full insert sequence Length = 631 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccgccgtctccacctcgccc 287 |||||||||||||||||||| Sbjct: 180 ccgccgtctccacctcgccc 161
>dbj|AK058364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F09, full insert sequence Length = 1363 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcctcctccagcgc 71 |||||||||||||||||||| Sbjct: 692 gccgccgcctcctccagcgc 673
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 1809304 cgcggggcggtactggccgc 1809285
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ctcgtcgcccggcggctcgt 171 |||||||||||||||||||| Sbjct: 228626 ctcgtcgcccggcggctcgt 228645
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 1241658 cgcggggcggtactggccgc 1241677
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacctccggccgccgcctcc 63 |||||||||||||||||||| Sbjct: 57945 cacctccggccgccgcctcc 57926
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 gctggacacctacgccatggagcg 28 |||||||||||||| ||||||||| Sbjct: 715971 gctggacacctacgacatggagcg 715994
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacctccggccgccgcctcc 63 |||||||||||||||||||| Sbjct: 57959 cacctccggccgccgcctcc 57940
>gb|U94812.1|ANU94812 Apaloderma narina 12S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence Length = 969 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 ccgccgtctccacctcgccctccc 291 |||||||||||| ||||||||||| Sbjct: 637 ccgccgtctccagctcgccctccc 660
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggccgcggccgcgccgctgc 201 |||||||||||||||||||| Sbjct: 25520264 ggccgcggccgcgccgctgc 25520245 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gtccccgccgtctccacctc 283 |||||||||||||||||||| Sbjct: 12946010 gtccccgccgtctccacctc 12946029
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 cgtgcccgccgccacctcctccgcgccg 119 ||||||| ||||||||||||||||||| Sbjct: 82673 cgtgccccacgccacctcctccgcgccg 82700
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||| ||||||||||||||| Sbjct: 53905 ccgccgcctcctcctccgcgccgc 53882
>gb|AC004156.1|AC004156 Homo sapiens chromosome 19, cosmid R33586, complete sequence Length = 41702 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 18541 ccgccgccacctactccgcgccgc 18564
>gb|BC025374.1| Homo sapiens ring finger protein 126, mRNA (cDNA clone MGC:23713 IMAGE:4093350), complete cds Length = 1322 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||||||| ||||||||||| Sbjct: 37 ccgccgccacctactccgcgccgc 14
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgcggggcggtactggccgc 231 |||||||||||||||||||| Sbjct: 118879 cgcggggcggtactggccgc 118898
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ccgccgccacctcctccgcgccgc 120 ||||| |||||||||||||||||| Sbjct: 715784 ccgccaccacctcctccgcgccgc 715761
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacctccggccgccgcctcc 63 |||||||||||||||||||| Sbjct: 70247 cacctccggccgccgcctcc 70228
>emb|AL137421.1|HSM802123 Homo sapiens mRNA; cDNA DKFZp434P072 (from clone DKFZp434P072); partial cds Length = 3301 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgcccgccgccacctcctcc 113 |||||||||||||||||||| Sbjct: 165 tgcccgccgccacctcctcc 146
>dbj|AB007144.1| Homo sapiens mRNA for ZIP-kinase, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1096 cggccgccgcctcctccagc 1077
>dbj|AB022341.1| Homo sapiens mRNA for ZIP kinase, complete cds Length = 2055 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cggccgccgcctcctccagc 69 |||||||||||||||||||| Sbjct: 1048 cggccgccgcctcctccagc 1029
>dbj|AB011676.1| Sus scrofa gene for desmin, partial cds Length = 704 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccgccgccacctcctccgcgccgc 120 |||||||| ||||||||||||||| Sbjct: 103 ccgccgcctcctcctccgcgccgc 126 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,707,790 Number of Sequences: 3902068 Number of extensions: 2707790 Number of successful extensions: 131173 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126941 Number of HSP's gapped (non-prelim): 4230 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
