ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08b12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 482 bits (243), Expect = e-133 Identities = 369/411 (89%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 54 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 113 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 114 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 173 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 174 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 233 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 234 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 293 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 294 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 353 Query: 320 gtatgcatgggagctcctcacccaggtctacaaattgcccactgatagaatttatgcaac 379 | ||| |||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 354 atttgcctgggagctcctcacccaggtgtacaaattgcctaccgatagaatttatgcgac 413 Query: 380 atactttggtggtgatgagaaagctggtctcgctcccgacactgagtcgaa 430 ||||||||||||||||||||| ||| || ||||| || || |||||||| Sbjct: 414 ttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaa 464
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 482 bits (243), Expect = e-133 Identities = 369/411 (89%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 200 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 259 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 260 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 319 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 320 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 379 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 380 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 439 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 440 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 499 Query: 320 gtatgcatgggagctcctcacccaggtctacaaattgcccactgatagaatttatgcaac 379 | ||| |||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 500 atttgcctgggagctcctcacccaggtgtacaaattgcctaccgatagaatttatgcgac 559 Query: 380 atactttggtggtgatgagaaagctggtctcgctcccgacactgagtcgaa 430 ||||||||||||||||||||| ||| || ||||| || || |||||||| Sbjct: 560 ttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaa 610
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 410 bits (207), Expect = e-111 Identities = 297/327 (90%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 155130 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 155189 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 155190 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 155249 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 155250 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 155309 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 155310 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 155369 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 155370 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 155429 Query: 320 gtatgcatgggagctcctcacccaggt 346 | ||| |||||||||||||||||||| Sbjct: 155430 atttgcctgggagctcctcacccaggt 155456
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 410 bits (207), Expect = e-111 Identities = 297/327 (90%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 46557 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 46616 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 46617 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 46676 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 46677 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 46736 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 46737 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 46796 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 46797 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 46856 Query: 320 gtatgcatgggagctcctcacccaggt 346 | ||| |||||||||||||||||||| Sbjct: 46857 atttgcctgggagctcctcacccaggt 46883 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 342 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 401 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 47813 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 47872 Query: 402 gctggtctcgctcccgacactgagtcgaa 430 ||| || ||||| || || |||||||| Sbjct: 47873 tttggacttgctcctgatacggagtcgaa 47901
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 410 bits (207), Expect = e-111 Identities = 297/327 (90%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5283359 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5283418 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 5283419 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5283478 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5283479 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5283538 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5283539 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5283598 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 5283599 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 5283658 Query: 320 gtatgcatgggagctcctcacccaggt 346 | ||| |||||||||||||||||||| Sbjct: 5283659 atttgcctgggagctcctcacccaggt 5283685 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 342 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 401 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 5284615 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 5284674 Query: 402 gctggtctcgctcccgacactgagtcgaa 430 ||| || ||||| || || |||||||| Sbjct: 5284675 tttggacttgctcctgatacggagtcgaa 5284703
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 410 bits (207), Expect = e-111 Identities = 297/327 (90%) Strand = Plus / Plus Query: 20 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 79 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5284146 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5284205 Query: 80 ccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 5284206 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5284265 Query: 140 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 199 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5284266 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5284325 Query: 200 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 259 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5284326 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5284385 Query: 260 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 319 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 5284386 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 5284445 Query: 320 gtatgcatgggagctcctcacccaggt 346 | ||| |||||||||||||||||||| Sbjct: 5284446 atttgcctgggagctcctcacccaggt 5284472 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 342 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 401 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 5285402 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 5285461 Query: 402 gctggtctcgctcccgacactgagtcgaa 430 ||| || ||||| || || |||||||| Sbjct: 5285462 tttggacttgctcctgatacggagtcgaa 5285490
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 369 bits (186), Expect = 5e-99 Identities = 318/362 (87%) Strand = Plus / Plus Query: 48 tggccgtcgagccccgtggtacccgtcgacgaccccacgctcttgttcgccaacgccggg 107 ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| || Sbjct: 228 tggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgga 287 Query: 108 atgagccagttcaagcccgtattcctcggcaccgcctccccggactcacagcttggccgc 167 |||| |||||||||||| || ||||||||||| || | |||||||| | ||| |||||| Sbjct: 288 atgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccgc 347 Query: 168 ctgagccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgacctt 227 ||| ||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 348 ctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacctc 407 Query: 228 gacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtcc 287 |||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 408 gacgacgtggggaatgacacctaccaccataccttcttcgagatgcttgggaactggtct 467 Query: 288 ttcggagactacttcaaggagggggccatcgggtatgcatgggagctcctcacccaggtc 347 ||||| ||||| |||||||||| ||||||| | | || |||||||| ||||||||||| Sbjct: 468 ttcggggactatttcaaggaggaggccatcagatgggcctgggagcttctcacccaggta 527 Query: 348 tacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaagctggt 407 || ||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||||| Sbjct: 528 tataaattgcccaccgatagaatttatgccacatactttggtggtgatgtgaaatctggt 587 Query: 408 ct 409 || Sbjct: 588 ct 589
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 153 bits (77), Expect = 6e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacgatgtgggcaa 368 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||||| |||||||||||||| ||||||||| | || |||||||| ||||| |||||||| Sbjct: 369 ggacagctaccaccacaccttcttcgagatgatgggcaactggtctttcggcgactactt 428 Query: 302 caaggagggggccatcg 318 |||| ||| |||||||| Sbjct: 429 caagaaggaggccatcg 445
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 133 bits (67), Expect = 5e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 184 acacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaagg 243 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgtggggcgcg 2170997 Query: 244 acacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagacta 298 | || ||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2170996 atacctaccaccacacctttttcgagatgctcggcaactggtcgttcggcgacta 2170942
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 1350687 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 1350686 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 1350627 Query: 303 aag 305 ||| Sbjct: 1350626 aag 1350624 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 74 cgacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcc 124 ||||||||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct: 1350855 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 1350805
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 282 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 283 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 342 Query: 303 aag 305 ||| Sbjct: 343 aag 345 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 74 cgacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcc 124 ||||||||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct: 114 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 164
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 209 cggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcga 268 |||||||||||||||||| || || |||||| | |||||||||||||||||||| ||||| Sbjct: 1925776 cggcaagcacaacgacctggaggaggtggggcacgacacgtaccaccacaccttcttcga 1925717 Query: 269 gatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatg 328 |||||| || |||||| |||||| ||||||||||||| | ||||||| ||| || || Sbjct: 1925716 gatgctgggcaactggagcttcggcgactacttcaaggccgaggccatccggtgggcgtg 1925657 Query: 329 ggagctcctc 338 |||||||||| Sbjct: 1925656 ggagctcctc 1925647
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| |||||||||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggcaa 263 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| |||||| ||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 264 ggatgtgtaccatcacacgttcttcgagatgctgggcaactggtcgtttggcgactactt 323 Query: 302 caag 305 |||| Sbjct: 324 caag 327
>ref|NM_001031056.1| Gallus gallus alanyl-tRNA synthetase like (AARSL), mRNA Length = 3367 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 273 ctcgggaactggtccttcggagactacttcaaggagg 309 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 gggatgagccagttcaagcccgtattcctcggcac 139 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>emb|AJ720883.1| Gallus gallus mRNA for hypothetical protein, clone 28n18 Length = 3367 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 273 ctcgggaactggtccttcggagactacttcaaggagg 309 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 gggatgagccagttcaagcccgtattcctcggcac 139 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 492 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 493 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 552 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 326 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 385 Query: 135 ggcaccgc 142 |||||||| Sbjct: 386 ggcaccgc 393
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 353 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 354 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 413 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 187 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 246 Query: 135 ggcaccgc 142 |||||||| Sbjct: 247 ggcaccgc 254
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 493 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || ||||| ||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 494 ggatgtctatcaccataccttctttgaaatgctgggaaactggtccttcggtgactactt 553 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 327 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 386 Query: 135 ggcaccgc 142 |||||||| Sbjct: 387 ggcaccgc 394
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 3348 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 3347 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 3288 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 3514 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 3455 Query: 135 ggcaccgc 142 |||||||| Sbjct: 3454 ggcaccgc 3447
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 24554 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 24555 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 24614 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 24388 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 24447 Query: 135 ggcaccgc 142 |||||||| Sbjct: 24448 ggcaccgc 24455
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 334 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 335 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 394 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 168 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 227 Query: 135 ggcaccgc 142 |||||||| Sbjct: 228 ggcaccgc 235
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 19510 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 19509 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 19450 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 19676 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 19617 Query: 135 ggcaccgc 142 |||||||| Sbjct: 19616 ggcaccgc 19609
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 1852 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 1851 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 1792 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 75 gacgaccccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctc 134 ||||| |||||||| ||||||||||||||||| |||| |||||||||||| | || || Sbjct: 2018 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 1959 Query: 135 ggcaccgc 142 |||||||| Sbjct: 1958 ggcaccgc 1951
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 93.7 bits (47), Expect = 4e-16 Identities = 131/159 (82%) Strand = Plus / Plus Query: 192 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 251 ||||||||||| || || || ||||| |||||||| |||||||| || |||||||| ||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggcaaggacacctac 330 Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 ||||| ||||||||||| ||||| || |||||||| || || || ||||||||| ||| | Sbjct: 331 caccatacctttttcgaaatgctgggcaactggtcgtttggcgattacttcaagaaggag 390 Query: 312 gccatcgggtatgcatgggagctcctcacccaggtctac 350 || || | | || |||||||| |||||| |||||||| Sbjct: 391 gctattgagatggcttgggagctgctcaccaaggtctac 429
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 87.7 bits (44), Expect = 3e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 207 ggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttc 266 |||||||||||||| || |||||||| || || ||||| | || |||||||| || ||| Sbjct: 244 ggcggcaagcacaatgatcttgacgatgttggcaaggatagctatcaccacacattcttc 303 Query: 267 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgca 326 |||||| | || |||||||| ||||| |||||||||||| ||| |||||| ||| | Sbjct: 304 gagatgttgggtaactggtctttcggcgactacttcaagaaggaggccatttcatattct 363 Query: 327 tgggagctcctcacccaggtctac 350 ||||||||||||||| |||||||| Sbjct: 364 tgggagctcctcaccaaggtctac 387 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 97 ccaacgccgggatgagccagttcaagcccgtattcctcggcaccg 141 ||||||| || |||| ||||||||||||| | ||||||||||||| Sbjct: 134 ccaacgctggcatgaaccagttcaagcccatcttcctcggcaccg 178
>gb|AC125476.30| Medicago truncatula clone mth2-10e13, complete sequence Length = 153919 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 177 gcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtg 236 |||||||| | ||||||||| ||||| || || || |||||||| || ||||| |||||| Sbjct: 107106 gcctgcaatatccagaagtgtatccgagcaggtggtaagcacaatgatcttgatgacgtg 107165 Query: 237 gggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagac 296 ||||| ||||| ||||| ||||| || || |||||||| || ||||||||||| || || Sbjct: 107166 gggaaagacacttaccatcacactttctttgagatgcttggtaactggtcctttggcgat 107225 Query: 297 tacttcaa 304 |||||||| Sbjct: 107226 tacttcaa 107233 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 369 atttatgcaacatactttggtggtgatgagaaagctggtct 409 ||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 107578 atttatgttacatattttggtggtgatgagaaaactggtct 107618 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 369 atttatgcaacatactttggtggtgatgagaaagctggtct 409 |||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 86971 atttatgccacatattttggcggtgatgagaaggctggtct 87011
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 192 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 251 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 291 Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 292 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 346 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Plus Query: 81 cccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||| || ||||| ||||||||||| |||| ||||| ||||||| | ||||| ||||| Sbjct: 121 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 179
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 192 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 251 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 553132 Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 553131 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 553077 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Minus Query: 81 cccacgctcttgttcgccaacgccgggatgagccagttcaagcccgtattcctcggcac 139 ||||| || ||||| ||||||||||| |||| ||||| ||||||| | ||||| ||||| Sbjct: 553302 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 553244
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| |||||||||||||| || |||||||| ||||| ||||| || |||||||| || Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggcaa 304 Query: 242 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 301 ||| || || |||||||| || |||||||| || ||||||||| ||||| ||||| Sbjct: 305 ggatgtctatcatcacaccttctttgagatgctgggctcctggtcctttggagattactt 364 Query: 302 caagga 307 |||||| Sbjct: 365 caagga 370
>ref|XM_687602.1| PREDICTED: Danio rerio similar to LOC443692 protein (LOC564258), mRNA Length = 2922 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 248 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 250 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 309 Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 310 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 367
>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22, complete sequence Length = 221392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 248 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 45416 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 45357 Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 45356 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 45299
>emb|CR769772.26| Zebrafish DNA sequence from clone CH211-12H2 in linkage group 2, complete sequence Length = 212945 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 248 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 132537 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 132596 Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 132597 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 132654
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 260 |||||||||||||||||||||||||| || |||| || | | || |||||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggctacaccgcgcgccaccacacc 841571 Query: 261 tttttcgagatgctcgggaactggtccttcggagactacttcaag 305 || ||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 841572 ttcttcgagatgctgggcaactggtcgttcggcgactacttcaag 841616
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||| ||||| || || ||||| |||||||||||||| ||||| | ||| |||||| Sbjct: 181866 aagcacaatgacctggatgatgtgggaaaggacacgtaccatcacacatattttgagatg 181807 Query: 273 ctcgggaactggtccttcggagactacttcaaggagg 309 | ||||| ||||| || |||||||||||||| |||| Sbjct: 181806 atggggaattggtcgtttggagactacttcaaagagg 181770
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 216 cacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctc 275 |||||||||||||||||||| || |||||||| |||||||| || || || || ||||| Sbjct: 510 cacaacgaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgctt 569 Query: 276 gggaactggtccttcggagactacttcaagg 306 || |||||||| ||||| || || ||||||| Sbjct: 570 ggaaactggtcattcggcgattatttcaagg 600
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 242 ggacacgtaccaccacacctttttcgagatg 272 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||||||| |||||||||||||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 182 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 241 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 242 ggacacgtaccaccacacctttttcgagatg 272 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 306 ga 307 || Sbjct: 652 ga 653
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 306 ga 307 || Sbjct: 652 ga 653
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 656 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 657 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 716 Query: 306 ga 307 || Sbjct: 717 ga 718
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 665 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 666 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 725 Query: 306 ga 307 || Sbjct: 726 ga 727
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 644 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 645 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 704 Query: 306 ga 307 || Sbjct: 705 ga 706
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 326 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 385 Query: 306 ga 307 || Sbjct: 386 ga 387
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 467 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 468 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 527 Query: 306 ga 307 || Sbjct: 528 ga 529
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 657 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 658 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 717 Query: 306 ga 307 || Sbjct: 718 ga 719
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||| ||||||||||| || || ||||| |||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacctggatgatgtgggcaaggac 273 Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||||| || |||||||| || |||||| || ||||| || |||||| Sbjct: 274 gtctaccaccacaccttctttgagatgctgggctcctggtcttttggagattatttcaag 333 Query: 306 ga 307 || Sbjct: 334 ga 335
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||||| || || Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggcaaagat 649 Query: 246 acgtaccaccacacctttttcgagatgct 274 |||||||||||||| || |||||||| Sbjct: 650 gtctaccaccacaccttctttgagatgct 678
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 80754 Query: 246 acgtaccaccacacctttttcgagatgct 274 ||||||||||| || || |||||||| Sbjct: 80755 gtctaccaccacactttctttgagatgct 80783
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 166570 Query: 246 acgtaccaccacacctttttcgagatgct 274 ||||||||||| || || |||||||| Sbjct: 166571 gtctaccaccacactttctttgagatgct 166599
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 296393 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 296334
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 89540 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 89481
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggaggg 310 |||||||||||| ||||| |||||||| |||||||| ||||| ||||| |||||| ||| Sbjct: 1996654 ccaccacaccttcttcgaaatgctcggcaactggtcgttcggcgactatttcaagaagga 1996713 Query: 311 ggccatcg 318 ||||||| Sbjct: 1996714 cgccatcg 1996721
>ref|XM_821287.1| Trypanosoma brucei TREU927 clone RPCI93-3D8 alanyl-tRNA synthetase (Tb927.6.700) partial mRNA Length = 2901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 250 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 309
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 ||||||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1821452 caccacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1821507 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacct 1821426
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 246 acgtaccaccacacctttttcgagatgc 273 ||||||||||| || || ||||||| Sbjct: 326 gtctaccaccacactttctttgagatgc 353
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||||||| | ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 5207769 acgtaccaccacaccatgttcgaaatgctgggcaactggtcattcggtgactacttcaag 5207710
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 299 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 20443459 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 20443409
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 299 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 85883 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 85833
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 60.0 bits (30), Expect = 6e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 ||||| ||||| |||||||||||||| || | |||||||| |||||||||||| ||| | Sbjct: 232656 caccataccttcttcgagatgctcggcaatttctccttcggcgactacttcaagaaggag 232715 Query: 312 gccatcgggtatgcatgggagctcctcacc 341 ||||| | | ||| |||||| |||||||| Sbjct: 232716 gccattgcctttgcctgggagttcctcacc 232745 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 239 ||||||||||| | || ||||| || |||||||||||||| || |||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacctggagaacgtgggg 232643
>ref|NM_186912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4203 Score = 60.0 bits (30), Expect = 6e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 276 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 335 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 256 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 315 Query: 336 ctcacccaggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgat 395 | || |||||||| ||||| ||||||||||| || ||||| || || |||||| Sbjct: 316 ttgactaaggtctacgaattggaggttgatagaatttttgtgacatatttcggaggtgat 375 Query: 396 gagaaa 401 |||||| Sbjct: 376 gagaaa 381
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| ||||||||||| ||||||| |||||||| ||||| |||||| Sbjct: 2184119 caccacaccttcttcgagatgctggggaacttctccttcggcgactatttcaag 2184066
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 253 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 312 Query: 273 ctcgggaactggtccttcggagactacttcaaggagggggccatcg 318 | || |||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 313 ttgggtaactggtccttcggtgactacttcaagaaggaggctatcg 358
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 232 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacct 3553655 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 90 ttgttcgccaacgccgggatgagccagttcaagcccgtattcctcgg 136 |||||| ||||||||||||||| |||||||||| ||| |||||||| Sbjct: 3553776 ttgttcaccaacgccgggatgaaccagttcaaggacgttttcctcgg 3553730 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgg 277 ||||||||||| |||||||||||||| Sbjct: 3553629 caccacaccttcttcgagatgctcgg 3553604
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 213 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 272 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 527098 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 527039 Query: 273 ctcgggaactggtccttcggagactacttcaaggagggggccatcg 318 | || |||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 527038 ttgggtaactggtccttcggtgactacttcaagaaggaggctatcg 526993
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacct 1704487
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||||||| | |||||||||||||||||||||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacct 4336088 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 306 |||||||| || ||||||||| | ||||||| |||||||| ||||||||||||| Sbjct: 4336062 caccacacgttcttcgagatgatggggaacttctccttcggcgactacttcaagg 4336008
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 208 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 267 ||||||||||||||||||| || || || || | ||||| || || || ||| | |||| Sbjct: 1322150 gcggcaagcacaacgacctcgaagaggtaggccatgacacctatcatcataccatgttcg 1322209 Query: 268 agatgctcgggaactggtccttcggagactacttcaag 305 |||||||||| |||||||| ||||| || ||||||||| Sbjct: 1322210 agatgctcggcaactggtcgttcggcgattacttcaag 1322247 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 77 cgaccccacgctcttgttcgccaacgccgggatgagccagttcaag 122 ||||||||||||| ||||| |||| ||||| |||| ||||||||| Sbjct: 1322034 cgaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 232 ||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacga 2140815 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 12 ttcatcgacttcttcaagtccaag 35 |||||||||||||||||||||||| Sbjct: 2141020 ttcatcgacttcttcaagtccaag 2140997 Score = 46.1 bits (23), Expect = 0.094 Identities = 47/55 (85%) Strand = Plus / Minus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 309 |||||||| ||||||||||| || |||| |||||| |||||||||||||||| Sbjct: 2140792 cacaccttcttcgagatgctgggcaacttcagcttcggcgactacttcaaggagg 2140738
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 222 gaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaac 281 |||||||||||||| || |||||||| |||||||| || || || || ||||| || ||| Sbjct: 731829 gaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgcttggaaac 731770 Query: 282 tggtccttcggagactacttcaagg 306 ||||| ||||| || || ||||||| Sbjct: 731769 tggtcattcggcgattatttcaagg 731745
>gb|BC073734.1| Xenopus laevis hypothetical protein LOC443692, mRNA (cDNA clone IMAGE:5085483), partial cds Length = 4625 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||| || |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 428 cacaccttctttgagatgcttgggaactggtccttcggggattactttaagga 480
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1420501 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1420553 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaa 220 |||||||||||||||||||| Sbjct: 1420447 cgcgccggcggcaagcacaa 1420466
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 308 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 166283 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 166227 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 ||||||||||||||||| |||||||| Sbjct: 166334 cgcgccggcggcaagcataacgacct 166309
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 308 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 2291 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 2347 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 ||||||||||||||||| |||||||| Sbjct: 2240 cgcgccggcggcaagcataacgacct 2265
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 260 |||||||||||||||||||||||||| || |||| || | | || |||||| ||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacctggaaaacgtcggctacaccgcgcgccaccatacc 3072283 Query: 261 tttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 3072282 tttttcgagatgctgggcaactggagctttggcgactacttcaag 3072238
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1947109 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1947161 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacct 1947080 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gcgccggcggcaagcacaac 221 |||||||||||||||||||| Sbjct: 1809835 gcgccggcggcaagcacaac 1809816
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 9685 ccaccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 9629 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 192 aagtgcatccgcgccggcggcaagcacaacgacct 226 |||||| | |||||||||||||||||||||||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacct 9710
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 257 cacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccat 316 |||||| ||| |||||||||| |||| |||||||| |||||||||||||| | |||||| Sbjct: 671126 caccttcttccagatgctcggcaacttctccttcggcgactacttcaaggaagaggccat 671067 Query: 317 c 317 | Sbjct: 671066 c 671066
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 gaactggtccttcggagactacttcaaggagg 309 ||||||||||||||| |||||||||||||||| Sbjct: 130999 gaactggtccttcggggactacttcaaggagg 130968
>gb|AE011806.1| Xanthomonas axonopodis pv. citri str. 306, section 184 of 469 of the complete genome Length = 10294 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggaggg 310 |||||| ||||| ||||| |||||||| |||||||| || || |||||||||||| ||| Sbjct: 3094 ccaccataccttcttcgaaatgctcggcaactggtcgtttggcgactacttcaagaagga 3153 Query: 311 ggccatcg 318 ||||||| Sbjct: 3154 cgccatcg 3161
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 ||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 3880179 caccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 3880234 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacga 223 ||||||||||||||||||||||| Sbjct: 3880128 cgcgccggcggcaagcacaacga 3880150
>gb|AY017381.1| Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 171 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 230 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 231 gacgtggg 238 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AF332359.1|AF332359 Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 171 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 230 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 231 gacgtggg 238 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagacta 298 ||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 173098 cacacttttttcgagatgctcggtaactggtcgttcggtgacta 173141
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 gaactggtccttcggagactacttcaaggagg 309 ||||||||||||||| |||||||||||||||| Sbjct: 1471975 gaactggtccttcggggactacttcaaggagg 1471944
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 276 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 335 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 8975648 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 8975589
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 276 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 335 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 101805 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 101746
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||||| || | |||||||||||||||||||||||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacct 25591
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 276 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 335 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 27091 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 27032
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 99777 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 99778 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 99837 Query: 303 aagg 306 |||| Sbjct: 99838 aagg 99841
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 258 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 308 ||||| |||||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 1500 accttcttcgagatgctcggcaacttctccttcggcgactatttcaaggag 1550 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacct 1468
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 303 aag 305 ||| Sbjct: 428 aag 430
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 303 aag 305 ||| Sbjct: 428 aag 430
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgaccttgacgacgt 235 |||||||||||||||||||||||||| ||| |||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgt 160203
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| ||| Sbjct: 3141773 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaagaaggac 3141714 Query: 312 gccatcg 318 ||||||| Sbjct: 3141713 gccatcg 3141707
>gb|AE012274.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 182 of 460 of the complete genome Length = 10188 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 351 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 405
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||| |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 615240 ccaccacacttttttcgagatgctgggcaactggagctttggcgactacttcaag 615186
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 423 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 424 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 483 Query: 303 aag 305 ||| Sbjct: 484 aag 486
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 364 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 365 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 424 Query: 303 aag 305 ||| Sbjct: 425 aag 427
>gb|AF399933.1|AF399933 Xanthomonas campestris RecA gene cluster, complete sequence Length = 3061 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 2913 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 2967
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 3038023 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 3037969
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 9248
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||||||| | |||||||| ||||||||||||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacct 4160978 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgct 274 |||||||||||| ||||||||||| Sbjct: 4160953 ccaccacaccttcttcgagatgct 4160930
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 76 acgaccccacgctcttgttcgccaacgccgggatgagccagttcaag 122 |||| ||||||||||| ||| |||||||||| |||| |||||||||| Sbjct: 3572278 acgatcccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| ||| Sbjct: 3149081 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaagaaggac 3149022 Query: 312 gccatcg 318 ||||||| Sbjct: 3149021 gccatcg 3149015
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 12626
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 469 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 470 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 529 Query: 303 aag 305 ||| Sbjct: 530 aag 532
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| || |||||||||||||| |||| || ||||| |||||||||||| Sbjct: 1524992 caccacacgttcttcgagatgctcggcaacttctcgttcggcgactacttcaag 1525045 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 ||||| |||||||||||||||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacct 1524966
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacct 906220
>ref|XM_742102.1| Aspergillus fumigatus Af293 alanyl-tRNA synthetase (Afu8g03880) partial mRNA Length = 3036 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 248 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||||||| Sbjct: 385 cagaagtgcattcgtgctggcggaaaacacaatgatttggacgacgtgggaaaggacagt 444 Query: 249 taccaccacacctttttcgagatgct 274 |||||||| || || ||||||||||| Sbjct: 445 taccaccatactttcttcgagatgct 470
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaa 220 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacct 3479180
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 208 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 267 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 845829 gcggcaagcacaatgaccttgaagaagtaggacatgatacctaccatcacaccatgttcg 845770 Query: 268 agatgctcgggaactggtccttcggagactacttcaag 305 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 845769 aaatgctgggtaactggtcgttcggtgattacttcaag 845732
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacct 273266
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacct 289243
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacct 194250
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacct 2422289 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cgccggcggcaagcacaacg 222 |||||||||||||||||||| Sbjct: 464923 cgccggcggcaagcacaacg 464904
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgaccttgacgacgtggg 238 ||||||||||||||||||||||| || ||| ||||||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgtggg 1319521
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacct 4276009
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacct 583659
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacct 6318181 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 257 cacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 308 |||||| |||||||||||||| |||| || ||||| ||||| ||||||||| Sbjct: 6318150 caccttcttcgagatgctcggcaacttctcgttcggcgactatttcaaggag 6318099
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 208 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 267 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 909185 gcggcaagcacaatgaccttgaagaagtaggacacgatacctaccatcacaccatgttcg 909126 Query: 268 agatgctcgggaactggtccttcggagactacttcaag 305 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 909125 aaatgctgggtaactggtcgttcggtgattacttcaag 909088
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>ref|NM_103905.2| Arabidopsis thaliana ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ nucleic acid binding AT1G50200 (ALATS) mRNA, complete cds Length = 3397 Score = 50.1 bits (25), Expect = 0.006 Identities = 127/161 (78%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665 Query: 306 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 365 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 666 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 725 Query: 366 agaatttatgcaacatactttggtggtgatgagaaagctgg 406 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 726 cgaatctacgctacatattttggcggtgatgagaaagctgg 766
>ref|XM_960604.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 50.1 bits (25), Expect = 0.006 Identities = 100/125 (80%) Strand = Plus / Plus Query: 192 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 251 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 |||||||| || || |||||| | || |||||||| || || || ||||| ||| ||| | Sbjct: 142 caccacactttctttgagatgttgggcaactggtcttttggcgattactttaagaaggag 201 Query: 312 gccat 316 ||||| Sbjct: 202 gccat 206
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 239 |||||||||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacctggagaacgtgggg 164048
>ref|XM_331764.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 50.1 bits (25), Expect = 0.006 Identities = 100/125 (80%) Strand = Plus / Plus Query: 192 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 251 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 311 |||||||| || || |||||| | || |||||||| || || || ||||| ||| ||| | Sbjct: 142 caccacactttctttgagatgttgggcaactggtcttttggcgattactttaagaaggag 201 Query: 312 gccat 316 ||||| Sbjct: 202 gccat 206
>ref|NM_001605.1| Homo sapiens alanyl-tRNA synthetase (AARS), mRNA Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|BT008807.1| Arabidopsis thaliana At1g50200 gene, complete cds Length = 2868 Score = 50.1 bits (25), Expect = 0.006 Identities = 127/161 (78%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 292 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 351 Query: 306 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 365 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 352 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 411 Query: 366 agaatttatgcaacatactttggtggtgatgagaaagctgg 406 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 412 cgaatctacgctacatattttggcggtgatgagaaagctgg 452
>ref|XM_961372.1| PREDICTED: Tribolium castaneum similar to CG13391-PA, isoform A (LOC654931), mRNA Length = 2898 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 ||||||||||| |||||||| ||| | || |||||||| || || |||||||||||| Sbjct: 277 taccaccacacttttttcgaaatgatgggcaactggtcgtttggtgactacttcaag 333
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 74 cgacgaccccacgctcttgttcgccaacgccgggatgagccagttcaag 122 ||||||||| ||||| ||||| | ||||||||||||| |||||||||| Sbjct: 598556 cgacgacccgacgctgctgttcacgaacgccgggatgaaccagttcaag 598508 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacga 223 ||||||||||||||||||||||| Sbjct: 598444 cgcgccggcggcaagcacaacga 598422
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 285 tccttcggagactacttcaaggagggggccatcgggtatgcatgggagctcctcacc 341 |||||||| |||||||||||||| || |||||| ||| || |||||||| |||||| Sbjct: 63493 tccttcggcgactacttcaaggaaggcgccatcacgtacgcctgggagctgctcacc 63437
>gb|BT008649.1| Arabidopsis thaliana clone RAFL09-78-D07 (R19577) At1g50200 mRNA, complete sequence Length = 3295 Score = 50.1 bits (25), Expect = 0.006 Identities = 127/161 (78%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 446 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 505 Query: 306 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 365 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 506 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 565 Query: 366 agaatttatgcaacatactttggtggtgatgagaaagctgg 406 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 566 cgaatctacgctacatattttggcggtgatgagaaagctgg 606
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 135115 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 135174 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 135175 gtctatcatcacaccttcttcgagatgct 135203
>dbj|AK222824.1| Homo sapiens mRNA for alanyl-tRNA synthetase variant, clone: HEP06614 Length = 3372 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 321 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 380 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 381 gtctatcatcacaccttcttcgagatgct 409
>gb|BT002526.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3172 Score = 50.1 bits (25), Expect = 0.006 Identities = 127/161 (78%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 431 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 490 Query: 306 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 365 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 491 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 550 Query: 366 agaatttatgcaacatactttggtggtgatgagaaagctgg 406 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 551 cgaatctacgctacatattttggcggtgatgagaaagctgg 591
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Minus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 178362 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 178303 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 178302 gtctatcatcacaccttcttcgagatgct 178274
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218
>ref|XM_308772.2| Anopheles gambiae str. PEST ENSANGP00000007670 (ENSANGG00000005781), partial mRNA Length = 2082 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 250 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 306
>ref|XM_308773.2| Anopheles gambiae str. PEST ENSANGP00000024244 (ENSANGG00000005781), partial mRNA Length = 2916 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 249 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 241 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 297
>gb|BC011451.1| Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334 IMAGE:3450606), complete cds Length = 3298 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 256 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 315 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 316 gtctatcatcacaccttcttcgagatgct 344
>dbj|D32050.1|HUMATS Homo sapiens mRNA for alanyl-tRNA synthetase, complete cds Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 186 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 245 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 246 acgtaccaccacacctttttcgagatgct 274 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 258 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 317 ||||||||||||||| | || |||||||| || || || ||||||||||||| ||| ||| Sbjct: 1109499 acctttttcgagatgttgggtaactggtcgttgggcgattacttcaaggaggaggcaatc 1109440 Query: 318 g 318 | Sbjct: 1109439 g 1109439
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 207 ggcggcaagcacaacgaccttgacgacgtggg 238 ||||||||||||||||||||||| ||||||| Sbjct: 2398244 ggcggcaagcacaacgaccttgaaaacgtggg 2398275 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 ||||||||| || || || ||||| || |||| |||||||| |||||||||||||| Sbjct: 2398288 ccaccacacgttctttgaaatgctgggcaacttttccttcggcgactacttcaagga 2398344
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 79244 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 79303 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 360 actgatagaatttatgcaacatactttggtggtgatgagaaagctgg 406 |||||| |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 79663 actgatcgaatctacgctacatattttggcggtgatgagaaagctgg 79709
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgctcgggaact 282 |||||| |||||||||||||||||||| |||| Sbjct: 594177 ccaccatacctttttcgagatgctcggcaact 594146 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 594316 ccaacgccgggatgaaccagttcaag 594291
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 48.1 bits (24), Expect = 0.024 Identities = 54/64 (84%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggcc 314 ||||||||||| || |||||||| |||| || ||||| |||||||||||| | | |||| Sbjct: 2833012 cacaccttttttgaaatgctcggcaacttctctttcggcgactacttcaagaaagaggcc 2833071 Query: 315 atcg 318 |||| Sbjct: 2833072 atcg 2833075 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||||| ||| | |||||||||||||| || |||||||| Sbjct: 2832944 cccagaaatgcgtgcgcgccggcggcaaacataacgacct 2832983
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 48.1 bits (24), Expect = 0.024 Identities = 99/124 (79%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 242 ||||| ||||||||||| || ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcgatgatgtgggcaaa 243634 Query: 243 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 302 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 243635 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 243694 Query: 303 aagg 306 |||| Sbjct: 243695 aagg 243698
>emb|Z22673.1|ATTRNASYA A.thaliana tRNA synthetase Length = 3357 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 246 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Minus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| |||||||||||||| |||| || || || |||||||||||| Sbjct: 2329820 cacaccttcttcgagatgctcggcaacttctcgtttggggactacttcaag 2329770
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||| ||| | |||||||||||||||||||| ||||| Sbjct: 4825319 ccagaaatgcgtgcgcgccggcggcaagcacaatgacct 4825281
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Minus Query: 73 tcgacgaccccacgctcttgttcgccaacgccgggatgagccagttc 119 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 2872545 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 2872499
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Minus Query: 73 tcgacgaccccacgctcttgttcgccaacgccgggatgagccagttc 119 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 26352 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 26306
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 caccacacctttttcgagatgct 274 ||||||||||||||||||||||| Sbjct: 1411903 caccacacctttttcgagatgct 1411925
>emb|Y08363.1|TTALAS T.thermophilus alaS gene Length = 3267 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Plus Query: 267 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 317 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 336 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 386
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Minus Query: 259 cctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 317 |||| ||| ||||||| || |||| |||||||| ||||||||||||||| ||||||| Sbjct: 2426009 ccttcttccagatgctgggcaacttctccttcggcgactacttcaaggagaaggccatc 2425951
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Minus Query: 73 tcgacgaccccacgctcttgttcgccaacgccgggatgagccagttc 119 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 103364 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 103318
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Minus Query: 267 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 317 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 1714490 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 1714440 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ttcctcggcaccgcctccccggac 152 ||||||||| |||||||||||||| Sbjct: 933005 ttcctcggctccgcctccccggac 932982
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Minus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||| ||||||||||| || |||| || ||||| |||||||||||| Sbjct: 2510135 cacaccttcttcgagatgctgggcaacttttcgttcggcgactacttcaag 2510085
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 188 ccagaagtgcatccgcgccggcggcaagcacaacgacct 226 |||||| ||| | ||||| |||||||||||||||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacct 1732564
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Minus Query: 267 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 317 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 1404042 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 1403992
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2795393 ccaacgccgggatgaaccagttcaag 2795368
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 3104360 ccaacgccgggatgaaccagttcaag 3104335
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gccggcggcaagcacaacgaccttga 229 |||||||||||||| ||||||||||| Sbjct: 1440642 gccggcggcaagcataacgaccttga 1440667
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2980285 ccaacgccgggatgaaccagttcaag 2980260
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2819915 ccaacgccgggatgaaccagttcaag 2819890
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||| ||||| Sbjct: 921057 cgcgccggcggcaagcacaatgacct 921082
>gb|AY994192.1| Cloning vector pSJS1472, complete sequence Length = 9582 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 5270 ccaacgccgggatgaaccagttcaag 5295
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 195 tgcatccgcgccggcggcaagcacaacgac 224 ||||||||||| || ||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2820549 ccaacgccgggatgaaccagttcaag 2820524
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaa 280 ||||||||||||||| |||||||| ||||| Sbjct: 935207 ccaccacaccttttttgagatgctggggaa 935236
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 ||||||||||||||||| |||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacct 47221 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 251 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||||||| ||||| |||||||| || | ||||| || ||||| |||||||| Sbjct: 47246 ccaccacaccttcttcgaaatgctcggcaatttttcctttggcgactatttcaagga 47302
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 201 cgcgccggcggcaagcacaacgacct 226 |||||||||||||||||||| ||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacct 3251666
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 224 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 286
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 257 cacctttttcgagatgctcgggaact 282 |||||||||||| ||||||||||||| Sbjct: 3369972 cacctttttcgaaatgctcgggaact 3369947
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 264 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 321 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 27465279 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 27465222
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 305 |||||||||||||| || ||||| ||||| | |||||||| || ||||||||| Sbjct: 340612 caccacaccttttttgaaatgctggggaatttttccttcggcgattacttcaag 340559
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2790027 ccaacgccgggatgaaccagttcaag 2790002
>ref|XM_215718.3| PREDICTED: Rattus norvegicus protein kinase C-like 2 (Prkcl2), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 ggccgcctgagccgcgcctgca 183 |||||||||||||||||||||| Sbjct: 186 ggccgcctgagccgcgcctgca 207
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 224 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 10552
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 264 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 321 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 34837 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 34780
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Minus Query: 264 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 321 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 84348 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 84291
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 257 cacctttttcgagatgctcgggaact 282 |||||||||||| ||||||||||||| Sbjct: 927055 cacctttttcgaaatgctcgggaact 927080
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 3613113 ccaacgccgggatgaaccagttcaag 3613088
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 3545821 ccaacgccgggatgaaccagttcaag 3545796
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2675665 ccaacgccgggatgaaccagttcaag 2675640
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 224 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 281
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgacct 226 ||||| |||||||||||||||||||| Sbjct: 20725 cgcgcgggcggcaagcacaacgacct 20750
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 2982983 ccaacgccgggatgaaccagttcaag 2982958
>gb|J01581.1|ECOALAS E. coli alaS gene coding for alanyl-tRNA synthetase Length = 3010 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 97 ccaacgccgggatgagccagttcaag 122 ||||||||||||||| |||||||||| Sbjct: 359 ccaacgccgggatgaaccagttcaag 384
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 1.5 Identities = 60/73 (82%) Strand = Plus / Plus Query: 268 agatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgcat 327 ||||||| ||||| | |||||||| |||||||||||| | | |||||| ||| |||| Sbjct: 1284334 agatgctggggaatttctccttcggtgactacttcaagaacgaggccattcagtacgcat 1284393 Query: 328 gggagctcctcac 340 |||||||| |||| Sbjct: 1284394 gggagctcgtcac 1284406
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 255 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||| ||||||||||| || |||| || ||||| || ||||||||||| Sbjct: 1194160 cacaccttcttcgagatgctgggcaacttctcgttcggcgattacttcaagga 1194108 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 cggcggcaagcacaacgaccttga 229 |||||| ||||||||||||||||| Sbjct: 1194209 cggcggaaagcacaacgaccttga 1194186
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 285 tccttcggagactacttcaaggagggggccatc 317 |||||||| |||||||||||||| || |||||| Sbjct: 8175844 tccttcggcgactacttcaaggaaggcgccatc 8175876 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gtcgcacacgccatggccgt 54 |||||||||||||||||||| Sbjct: 1033181 gtcgcacacgccatggccgt 1033162
>dbj|AK183233.1| Mus musculus cDNA, clone:Y0G0125D01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 190 agaagtgcatccgcgccggcggcaagcacaacgacct 226 |||| |||||||| || || ||||||||||||||||| Sbjct: 182 agaaatgcatccgagctgggggcaagcacaacgacct 218
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 285 tccttcggagactacttcaaggagggggccatc 317 |||||||| |||||||||||||| || |||||| Sbjct: 3857368 tccttcggcgactacttcaaggaaggcgccatc 3857336
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||||| ||| | ||||| |||||||||||||| ||||| Sbjct: 2161380 cccagaaatgcgtgcgcgcaggcggcaagcacaatgacct 2161341
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 tccttcggagactacttcaaggag 308 |||||||| ||||||||||||||| Sbjct: 1112987 tccttcggcgactacttcaaggag 1113010
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ccacacctttttcgagatgc 273 |||||||||||||||||||| Sbjct: 3540550 ccacacctttttcgagatgc 3540569
>ref|XM_532155.2| PREDICTED: Canis familiaris similar to alanyl-tRNA synthetase like (LOC474920), mRNA Length = 2958 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 93 ttcgccaacgccgggatgagccagttcaagcc 124 |||| ||||||||| |||| |||||||||||| Sbjct: 220 ttcgtcaacgccggcatgaaccagttcaagcc 251
>gb|AE004140.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 48 of 251 of the complete chromosome Length = 10836 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 199 tccgcgccggcggcaagcacaacgacct 226 ||||||| ||||| |||||||||||||| Sbjct: 6993 tccgcgcgggcggtaagcacaacgacct 7020
>ref|XM_970534.1| PREDICTED: Tribolium castaneum similar to CG4633-PA (LOC664536), mRNA Length = 3135 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 189 cagaagtgcatccgcgccggcggcaagcacaacgac 224 |||||||||||||| | ||| ||||| ||||||||| Sbjct: 412 cagaagtgcatccgagtcggaggcaaacacaacgac 447
>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 6/7 Length = 326301 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgac 224 ||||| |||||||||||||||||| Sbjct: 67816 cgcgcaggcggcaagcacaacgac 67839
>gb|DQ417138.1| Ictalurus punctatus clone SBBD12B alanyl-tRNA synthetase-like mRNA, partial cds Length = 349 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 aacacccagaagtgcatccg 202 |||||||||||||||||||| Sbjct: 283 aacacccagaagtgcatccg 302
>gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 gagatgctcgggaactggtccttcggagactacttcaagg 306 |||||||| || ||||||||||| || || |||||||||| Sbjct: 21779 gagatgctgggcaactggtcctttggggattacttcaagg 21818
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ccaccacacctttttcgagatgct 274 |||||||||||| ||||||||||| Sbjct: 1600518 ccaccacaccttcttcgagatgct 1600495
>gb|DQ388475.1| Heliothis armigera cypovirus 14 segment 3, complete sequence Length = 3918 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atagaatttatgcaacatac 383 |||||||||||||||||||| Sbjct: 2479 atagaatttatgcaacatac 2498
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 187 cccagaagtgcatccgcgccggcggcaagcacaacgacct 226 ||||||||||| | || ||||| |||||||| |||||||| Sbjct: 1680298 cccagaagtgcgttcgggccggaggcaagcataacgacct 1680259
>gb|AF389454.1|AF389454 Lymantria dispar cypovirus 14 segment 3, complete sequence Length = 3921 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atagaatttatgcaacatac 383 |||||||||||||||||||| Sbjct: 2482 atagaatttatgcaacatac 2501
>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region, complete sequence Length = 145356 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tggtggtgatgagaaagctg 405 |||||||||||||||||||| Sbjct: 32113 tggtggtgatgagaaagctg 32094
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tggtggtgatgagaaagctg 405 |||||||||||||||||||| Sbjct: 144462 tggtggtgatgagaaagctg 144443
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence Length = 182617 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tggtggtgatgagaaagctg 405 |||||||||||||||||||| Sbjct: 149522 tggtggtgatgagaaagctg 149503
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 acctttttcgagatgctcgggaactggt 285 ||||| ||||||||||| |||||||||| Sbjct: 17919688 accttcttcgagatgcttgggaactggt 17919715
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cacacctttttcgagatgct 274 |||||||||||||||||||| Sbjct: 393730 cacacctttttcgagatgct 393749
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 252 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 307 |||||||| |||||||| ||||| || |||| || ||||| || ||||||||||| Sbjct: 1599694 caccacacatttttcgaaatgctgggcaacttctcgttcggcgattacttcaagga 1599639
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 acctttttcgagatgctcgggaactggt 285 ||||| ||||||||||| |||||||||| Sbjct: 39523 accttcttcgagatgcttgggaactggt 39550
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 acctttttcgagatgctcgggaactggt 285 ||||| ||||||||||| |||||||||| Sbjct: 166810 accttcttcgagatgcttgggaactggt 166837
>gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18 of 83 of the complete sequence Length = 166593 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 gagatgctcgggaactggtccttcggagactacttcaagg 306 |||||||| || ||||||||||| || || |||||||||| Sbjct: 35109 gagatgctgggcaactggtcctttggggattacttcaagg 35148
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cgcgccggcggcaagcacaacgac 224 ||||| |||||||||||||||||| Sbjct: 1204836 cgcgcaggcggcaagcacaacgac 1204859
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 192 aagtgcatccgcgccggcggcaagcacaacga 223 |||||| | ||||| ||||||||||||||||| Sbjct: 5355554 aagtgcgtgcgcgcaggcggcaagcacaacga 5355523
>gb|L78074.1|VIBRECX Vibrio cholerae recX gene, complete cds, alanyl-tRNA syntehtase (alaS) gene, 5' end of cds Length = 2102 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 199 tccgcgccggcggcaagcacaacgacct 226 ||||||| ||||| |||||||||||||| Sbjct: 953 tccgcgcgggcggtaagcacaacgacct 980
>emb|AL731831.17| Mouse DNA sequence from clone RP23-105O13 on chromosome 2, complete sequence Length = 218818 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ctcctcacccaggtctacaa 352 |||||||||||||||||||| Sbjct: 127546 ctcctcacccaggtctacaa 127527
>dbj|AB070956.1| Streptomyces avermitilis peptide-7 biosynthetic gene cluster Length = 54101 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gtcgcacacgccatggccgt 54 |||||||||||||||||||| Sbjct: 45013 gtcgcacacgccatggccgt 44994 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,761,041 Number of Sequences: 3902068 Number of extensions: 2761041 Number of successful extensions: 51341 Number of sequences better than 10.0: 227 Number of HSP's better than 10.0 without gapping: 224 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 47823 Number of HSP's gapped (non-prelim): 3483 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
