ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11... 32 0.47
2IPO11_HUMAN (Q9UI26) Importin-11 (Imp11) (Ran-binding protein 11... 32 0.47
3CAPK_STAAU (P39860) Protein capK 28 5.2

>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +1

Query: 292 VTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 393
           V Q+L  A S D ++ K AEE LKQ++ Q  PGF
Sbjct: 10  VLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGF 41



to top

>IPO11_HUMAN (Q9UI26) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +1

Query: 292 VTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 393
           V Q+L  A S D ++ K AEE LKQ++ Q  PGF
Sbjct: 10  VLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGF 41



to top

>CAPK_STAAU (P39860) Protein capK|
          Length = 449

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 292 VTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 393
           + Q+++SA  ADG   K+  + L +FQ + L G+
Sbjct: 183 LNQLMISAYHADGENLKYYIKKLNKFQPETLDGY 216


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,005,841
Number of Sequences: 219361
Number of extensions: 572619
Number of successful extensions: 1071
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top