ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476665.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.089
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
3dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
4ref|XM_469022.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.35
5gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.35
7gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 44 0.35
8gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
11gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
12dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13ref|NM_033224.3| Homo sapiens purine-rich element binding protei... 40 5.5
14ref|XM_524343.1| PREDICTED: Pan troglodytes similar to KIAA2034 ... 40 5.5
15ref|NM_193002.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
16ref|XM_472305.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
17gb|AY702706.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 5.5
18ref|NM_024729.2| Homo sapiens myosin, heavy polypeptide 14 (MYH1... 40 5.5
19gb|AC004854.3| Homo sapiens PAC clone RP4-673M15 from 7, complet... 40 5.5
20ref|NM_001006217.1| Gallus gallus phosphorylase kinase, gamma 1 ... 40 5.5
21gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome... 40 5.5
22emb|AL359672.19| Human DNA sequence from clone RP11-208C17 on ch... 40 5.5
23gb|AY165122.1| Homo sapiens myosin heavy chain (MYH14) mRNA, com... 40 5.5
24gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
25gb|AY341248.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 5.5
26ref|XM_781202.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.5
27emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 5.5
28emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
29emb|AJ720589.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.5
30gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome... 40 5.5
31gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, compl... 40 5.5
32dbj|AK125082.1| Homo sapiens cDNA FLJ43092 fis, clone COLON20025... 40 5.5
33gb|AY039216.1| Homo sapiens Pur-beta (PURB) mRNA, complete cds 40 5.5
34gb|AF336292.1| Swine hepatitis E virus isolate NLSW28 structural... 40 5.5
35gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.5
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
39gb|BC047792.1| Homo sapiens, clone IMAGE:6471309, mRNA 40 5.5
40dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
41dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
42gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
43gb|BC101737.1| Homo sapiens purine-rich element binding protein ... 40 5.5
44gb|BC101735.1| Homo sapiens purine-rich element binding protein ... 40 5.5
45gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, compl... 40 5.5 
>ref|XM_476665.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3330

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 338 gacgtcgacgggcgcctttcgagctgggacg 368
           ||||| ||||||||||| |||||||||||||
Sbjct: 130 gacgtggacgggcgcctctcgagctgggacg 160
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 338     gacgtcgacgggcgcctttcgagctgggacg 368
               ||||| ||||||||||| |||||||||||||
Sbjct: 2793654 gacgtggacgggcgcctctcgagctgggacg 2793624
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1364A02
          Length = 137933

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 338   gacgtcgacgggcgcctttcgagctgggacg 368
             ||||| ||||||||||| |||||||||||||
Sbjct: 97215 gacgtggacgggcgcctctcgagctgggacg 97185
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>ref|XM_469022.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1766

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 297 aggaggcggcggcgctgcggga 318
           ||||||||||||||||||||||
Sbjct: 197 aggaggcggcggcgctgcggga 218
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>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17
             map near S16403, complete sequence
          Length = 172238

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 297   aggaggcggcggcgctgcggga 318
             ||||||||||||||||||||||
Sbjct: 94499 aggaggcggcggcgctgcggga 94520
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 297      aggaggcggcggcgctgcggga 318
                ||||||||||||||||||||||
Sbjct: 24978096 aggaggcggcggcgctgcggga 24978117



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 297     aggaggcggcggcgctgcggga 318
               ||||||||||||||||||||||
Sbjct: 2369789 aggaggcggcggcgctgcggga 2369810
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence,
            complete sequence
          Length = 170020

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 297  aggaggcggcggcgctgcggga 318
            ||||||||||||||||||||||
Sbjct: 9903 aggaggcggcggcgctgcggga 9924
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>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0083D24, complete sequence
          Length = 150503

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 297   aggaggcggcggcgctgcggga 318
             ||||||||||||||||||||||
Sbjct: 86631 aggaggcggcggcgctgcggga 86652
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 297      aggaggcggcggcgctgcggga 318
                ||||||||||||||||||||||
Sbjct: 25069371 aggaggcggcggcgctgcggga 25069392



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 297     aggaggcggcggcgctgcggga 318
               ||||||||||||||||||||||
Sbjct: 2369899 aggaggcggcggcgctgcggga 2369920
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 297      aggaggcggcggcgctgcggg 317
                |||||||||||||||||||||
Sbjct: 28797178 aggaggcggcggcgctgcggg 28797198
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 328     cgcgctggtggacgtcgacgggcgc 352
               |||||||||||||| ||||||||||
Sbjct: 1001952 cgcgctggtggacgacgacgggcgc 1001976
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 297    aggaggcggcggcgctgcggg 317
              |||||||||||||||||||||
Sbjct: 104953 aggaggcggcggcgctgcggg 104973
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>ref|NM_033224.3| Homo sapiens purine-rich element binding protein B (PURB), mRNA
          Length = 9074

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 cggcggtgggccgtgcgggt 398
           ||||||||||||||||||||
Sbjct: 49  cggcggtgggccgtgcgggt 68
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>ref|XM_524343.1| PREDICTED: Pan troglodytes similar to KIAA2034 protein (LOC468959),
           mRNA
          Length = 5805

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 181 gaggcggcggcgctgcggga 200
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>ref|NM_193002.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  ggaggcggcggcgctgcggg 317
            ||||||||||||||||||||
Sbjct: 1125 ggaggcggcggcgctgcggg 1144
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>ref|XM_472305.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 291 agcaaaaggaggcggcggcgctgc 314
           |||| |||||||||||||||||||
Sbjct: 633 agcagaaggaggcggcggcgctgc 656
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>gb|AY702706.1| Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 9
             (CYP2C9) gene, complete cds
          Length = 60723

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    catagtgggtggggaaggag 94
             ||||||||||||||||||||
Sbjct: 25544 catagtgggtggggaaggag 25525
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>ref|NM_024729.2| Homo sapiens myosin, heavy polypeptide 14 (MYH14), mRNA
          Length = 6786

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 243 gaggcggcggcgctgcggga 262
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>gb|AC004854.3| Homo sapiens PAC clone RP4-673M15 from 7, complete sequence
          Length = 98697

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   cggcggtgggccgtgcgggt 398
             ||||||||||||||||||||
Sbjct: 35363 cggcggtgggccgtgcgggt 35382
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>ref|NM_001006217.1| Gallus gallus phosphorylase kinase, gamma 1 (muscle) (PHKG1), mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 24  gaggcggcggcgctgcggga 43
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>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence
          Length = 159308

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tagtgggtggggaaggagat 96
             ||||||||||||||||||||
Sbjct: 69781 tagtgggtggggaaggagat 69762
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>emb|AL359672.19| Human DNA sequence from clone RP11-208C17 on chromosome 10 Contains the
             CYP2C9 gene for cytochrome P450 family 2 subfamily C
             polypeptide 9, a mitochondrial NADH dehydrogenase 4
             (MTND4) pseudogene, a pseudogene similar to part of
             cytochrome P450 family 2 subfamily C, a novel pseudogene
             and the CYP2C8 gene for cytochrome P450 family 2 subfamily
             C polypeptide 8, complete sequence
          Length = 143181

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    catagtgggtggggaaggag 94
             ||||||||||||||||||||
Sbjct: 25607 catagtgggtggggaaggag 25588
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>gb|AY165122.1| Homo sapiens myosin heavy chain (MYH14) mRNA, complete cds
          Length = 6786

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 243 gaggcggcggcgctgcggga 262
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>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    gaggcggcggcgctgcggga 318
              ||||||||||||||||||||
Sbjct: 140718 gaggcggcggcgctgcggga 140737
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>gb|AY341248.1| Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 9
             (CYP2C9) gene, complete cds
          Length = 53526

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    catagtgggtggggaaggag 94
             ||||||||||||||||||||
Sbjct: 18347 catagtgggtggggaaggag 18328
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>ref|XM_781202.1| PREDICTED: Strongylocentrotus purpuratus similar to piwi like
           homolog 1 (LOC581188), partial mRNA
          Length = 1436

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  gggaaggagatccatggcac 105
           ||||||||||||||||||||
Sbjct: 595 gggaaggagatccatggcac 614
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>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tgcgcttgcgggagcgacta 27
              ||||||||||||||||||||
Sbjct: 203551 tgcgcttgcgggagcgacta 203532
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>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
              complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    agcaaaaggaggcggcggcgctgc 314
              |||| |||||||||||||||||||
Sbjct: 100787 agcagaaggaggcggcggcgctgc 100810
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>emb|AJ720589.1| Gallus gallus mRNA for hypothetical protein, clone 20n15
          Length = 1311

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 24  gaggcggcggcgctgcggga 43
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>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence
          Length = 209118

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    agtgggtggggaaggagatc 97
             ||||||||||||||||||||
Sbjct: 49022 agtgggtggggaaggagatc 49041
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>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence
          Length = 110184

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   gaggcggcggcgctgcggga 318
             ||||||||||||||||||||
Sbjct: 48522 gaggcggcggcgctgcggga 48503
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>dbj|AK125082.1| Homo sapiens cDNA FLJ43092 fis, clone COLON2002520, moderately
           similar to Myosin heavy chain, nonmuscle type B
          Length = 3130

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gaggcggcggcgctgcggga 318
           ||||||||||||||||||||
Sbjct: 322 gaggcggcggcgctgcggga 341
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>gb|AY039216.1| Homo sapiens Pur-beta (PURB) mRNA, complete cds
          Length = 1091

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 cggcggtgggccgtgcgggt 398
           ||||||||||||||||||||
Sbjct: 49  cggcggtgggccgtgcgggt 68
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>gb|AF336292.1| Swine hepatitis E virus isolate NLSW28 structural protein gene,
           partial cds
          Length = 476

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 262 ggtcgtgagctcggctgtgccagcggcg 289
           |||||||||||||||||| ||| |||||
Sbjct: 182 ggtcgtgagctcggctgtcccatcggcg 155
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     ggaggcggcggcgctgcggg 317
               ||||||||||||||||||||
Sbjct: 5061248 ggaggcggcggcgctgcggg 5061229



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 383     ggtgggccgtgcgggtgggccggc 406
               |||||||||||||| |||||||||
Sbjct: 2069676 ggtgggccgtgcggatgggccggc 2069653
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 291      agcaaaaggaggcggcggcgctgc 314
                |||| |||||||||||||||||||
Sbjct: 19318955 agcagaaggaggcggcggcgctgc 19318978
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      gaggcggcggcgctgcggga 318
                ||||||||||||||||||||
Sbjct: 20833657 gaggcggcggcgctgcggga 20833676
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 298      ggaggcggcggcgctgcggg 317
                ||||||||||||||||||||
Sbjct: 22495172 ggaggcggcggcgctgcggg 22495153
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>gb|BC047792.1| Homo sapiens, clone IMAGE:6471309, mRNA
          Length = 1475

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 cggcggtgggccgtgcgggt 398
           ||||||||||||||||||||
Sbjct: 361 cggcggtgggccgtgcgggt 342
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>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1097D05
          Length = 144879

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   ggaggcggcggcgctgcggg 317
             ||||||||||||||||||||
Sbjct: 10909 ggaggcggcggcgctgcggg 10890
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>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672C09
          Length = 145655

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    ggaggcggcggcgctgcggg 317
              ||||||||||||||||||||
Sbjct: 119310 ggaggcggcggcgctgcggg 119291
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      gaggcggcggcgctgcggga 318
                ||||||||||||||||||||
Sbjct: 21143892 gaggcggcggcgctgcggga 21143911
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>gb|BC101737.1| Homo sapiens purine-rich element binding protein B, mRNA (cDNA
           clone MGC:126786 IMAGE:8069243), complete cds
          Length = 989

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 cggcggtgggccgtgcgggt 398
           ||||||||||||||||||||
Sbjct: 55  cggcggtgggccgtgcgggt 74
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>gb|BC101735.1| Homo sapiens purine-rich element binding protein B, mRNA (cDNA
           clone MGC:126784 IMAGE:8069241), complete cds
          Length = 989

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 cggcggtgggccgtgcgggt 398
           ||||||||||||||||||||
Sbjct: 55  cggcggtgggccgtgcgggt 74
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>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence
          Length = 226568

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tagtgggtggggaaggagat 96
              ||||||||||||||||||||
Sbjct: 186210 tagtgggtggggaaggagat 186191


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,207,336
Number of Sequences: 3902068
Number of extensions: 2207336
Number of successful extensions: 51795
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50899
Number of HSP's gapped (non-prelim): 896
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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