Clone Information

BLAST Search Result

Clone Name	bastl08b07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Ma...	34	0.15
2	TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)	33	0.33
3	CEBPB_MOUSE (P28033) CCAAT/enhancer-binding protein beta (C/EBP ...	33	0.33
4	CEBPB_RAT (P21272) CCAAT/enhancer-binding protein beta (C/EBP be...	33	0.33
5	MSC3_ASHGO (Q74ZL3) Meiotic sister-chromatid recombination prote...	33	0.43
6	APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa...	32	0.56
7	GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4) (End...	32	0.73
8	NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p...	32	0.95
9	NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4...	32	0.95
10	SELV_HUMAN (P59797) Selenoprotein V	32	0.95
11	ODO2_HUMAN (P36957) Dihydrolipoyllysine-residue succinyltransfer...	32	0.95
12	TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)	32	0.95
13	MOT8_MOUSE (O70324) Monocarboxylate transporter 8 (MCT 8) (X-lin...	32	0.95
14	ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-...	31	1.2
15	VTP3_TTV1V (P19275) Viral protein TPX	31	1.6
16	AAAT_RABIT (O19105) Neutral amino acid transporter B(0) (ATB(0))...	31	1.6
17	PININ_MOUSE (O35691) Pinin	30	2.1
18	CNTP1_RAT (P97846) Contactin-associated protein 1 precursor (Cas...	30	2.8
19	PRAX_MOUSE (O55103) Periaxin	30	2.8
20	FTSK_SALTI (Q8Z814) DNA translocase ftsK	30	2.8
21	SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ...	30	2.8
22	DPOL_TUHV2 (Q9YUS2) DNA polymerase (EC 2.7.7.7)	30	2.8
23	DPOL_TUHV1 (Q9YUS3) DNA polymerase (EC 2.7.7.7)	30	2.8
24	MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-lin...	30	2.8
25	IER2_HUMAN (Q9BTL4) Immediate early response gene 2 protein (Pro...	30	3.6
26	EGR1_MOUSE (P08046) Early growth response protein 1 (EGR-1) (Kro...	30	3.6
27	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	30	3.6
28	ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ...	30	3.6
29	ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein ...	30	3.6
30	EGR1_RAT (P08154) Early growth response protein 1 (EGR-1) (Krox-...	30	3.6
31	NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-...	30	3.6
32	EGR1_HUMAN (P18146) Early growth response protein 1 (EGR-1) (Kro...	30	3.6
33	NUCM_CAEEL (Q93873) Probable NADH-ubiquinone oxidoreductase 49 k...	30	3.6
34	DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3...	30	3.6
35	CK016_HUMAN (Q9NQ32) Protein C11orf16	30	3.6
36	GR65_HUMAN (Q9BQQ3) Golgi reassembly-stacking protein 1 (Golgi r...	30	3.6
37	KGUA_STRKA (Q8GAU4) Guanylate kinase (EC 2.7.4.8) (GMP kinase)	30	3.6
38	YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear pro...	30	3.6
39	PCOC1_RAT (O08628) Procollagen C-endopeptidase enhancer 1 precur...	29	4.7
40	WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...	29	4.7
41	CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor	29	4.7
42	YN03_CAEEL (Q03607) Hypothetical protein T23G5.3	29	4.7
43	EGR1_POEGU (O73693) Early growth response protein 1 (EGR-1) (Zin...	29	4.7
44	BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless h...	29	4.7
45	ZAR1_HUMAN (Q86SH2) Zygote arrest 1 (Oocyte-specific maternal ef...	29	6.2
46	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	29	6.2
47	CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cycli...	29	6.2
48	TRA2_CAEBR (Q17307) Sex-determining transformer protein 2 precur...	29	6.2
49	GNDS_HUMAN (Q12967) Ral guanine nucleotide dissociation stimulat...	29	6.2
50	MMP25_HUMAN (Q9NPA2) Matrix metalloproteinase-25 precursor (EC 3...	29	6.2
51	CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor	29	6.2
52	SYP_STRCO (Q9KYR6) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline...	29	6.2
53	SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot...	29	6.2
54	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	29	6.2
55	TRA1_CAEBR (Q17308) Sex-determining transformer protein 1	29	6.2
56	TRYU_DROME (P42279) Trypsin eta precursor (EC 3.4.21.4)	29	6.2
57	IE68_EHV4 (P18346) Immediate-early protein IE68 (ORF4) (Fragment)	28	8.1
58	FLNA_MOUSE (Q8BTM8) Filamin-A (Alpha-filamin) (Filamin-1) (Endot...	28	8.1
59	DPOLM_HUMAN (Q9NP87) DNA polymerase mu (EC 2.7.7.7) (Pol Mu)	28	8.1
60	PCOC1_MOUSE (Q61398) Procollagen C-endopeptidase enhancer 1 prec...	28	8.1
61	SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)	28	8.1
62	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	28	8.1
63	ETS6_DROME (P29776) DNA-binding protein D-ETS-6	28	8.1
64	POLG_BOVEV (P12915) Genome polyprotein [Contains: Coat protein V...	28	8.1
65	IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASP...	28	8.1
66	SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)	28	8.1
67	CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa...	28	8.1
68	GRC3_CRYNE (Q5KI47) Protein GRC3	28	8.1

>LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29) (L-31)
           (Galactoside-binding protein) (GALBP)
          Length = 249

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPVP--YDLPRVDPVEIPT--------AEPASGPHTR 381
           PPGA   +  P   +     Y G P P  Y  P   P   P+        A PA+GP+  
Sbjct: 49  PPGAYPGQAPPGAYHGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSAPGAYPATGPY-- 106

Query: 382 GLPVAPVVDPVRLPV 426
           G P  P++ P  LP+
Sbjct: 107 GAPAGPLIVPYNLPL 121

to top

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 28/90 (31%), Positives = 38/90 (42%)
 Frame = +1

Query: 145  SGAVQIRRAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLP 324
            S A + RRA + A A    +  +  R   PP  P    AP  D++       PP P    
Sbjct: 2680 SRARRHRRARSLARATQASATTQGWR---PPALP-DTVAPVTDFARPPAPPKPPEPAPHA 2735

Query: 325  RVDPVEIPTAEPASGPHTRGLPVAPVVDPV 414
             V  V +P    A+G  +  LP+ PV  PV
Sbjct: 2736 LVSGVPLPLGPQAAGQASPALPIDPVPPPV 2765

to top

>CEBPB_MOUSE (P28033) CCAAT/enhancer-binding protein beta (C/EBP beta)|
           (Interleukin-6-dependent-binding protein) (IL-6DBP)
           (Liver-enriched transcriptional activator) (LAP)
           (AGP/EBP)
          Length = 296

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDP 411
           PP A  P E  N  Y    +  G       PR      P AEPA G H R +  +P ++P
Sbjct: 15  PPAAFRPMEVANFYYEPDCLAYGAKAARAAPRA-----PAAEPAIGEHERAIDFSPYLEP 69

Query: 412 V 414
           +
Sbjct: 70  L 70

to top

>CEBPB_RAT (P21272) CCAAT/enhancer-binding protein beta (C/EBP beta)|
           (Interleukin-6-dependent-binding protein) (IL-6DBP)
           (Liver-enriched transcriptional activator) (LAP)
           (Silencer factor B) (SF-B) (C/EBP-related protein 2)
          Length = 297

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDP 411
           PP A  P E  N  Y    +  G       PR      P AEPA G H R +  +P ++P
Sbjct: 15  PPAAFRPMEVANFYYEPDCLAYGAKAARAAPRA-----PAAEPAIGEHERAIDFSPYLEP 69

Query: 412 V 414
           +
Sbjct: 70  L 70

to top

>MSC3_ASHGO (Q74ZL3) Meiotic sister-chromatid recombination protein 3|
          Length = 751

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = +1

Query: 235 PGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEI-------PTAEPASGPHTRGLPV 393
           P   +  +    ++      D PP+P D+P VDP+++       PT EPA GP    +  
Sbjct: 520 PRRSISSQGHKAEHEHVFTDDIPPLP-DIPLVDPMQVKPKDVPLPTVEPALGP--TDVSP 576

Query: 394 APVVDP 411
           A V DP
Sbjct: 577 ARVADP 582

to top

>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor|
           (45/47 kDa antigen) (Fibronectin attachment protein)
           (FAP-A)
          Length = 381

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +1

Query: 166 RAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEI 345
           +A A A A +G       RR++P  AP P  AP      A     PP P D P   P   
Sbjct: 71  QAGAPAPAPNGQQRPPRRRRMIPTRAPPPAGAPPNGAPPAAPNGAPPPPVD-PNAPPP-- 127

Query: 346 PTAEPASG--PHTRGLP 390
           P A+P +G  P++  LP
Sbjct: 128 PPADPNAGRIPNSYVLP 144

to top

>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 2   PASSNSSSTFPLPLATTYPTPILAPSAAPRP 94
           P+ S S +  P P  T  PTP L P+A P P
Sbjct: 419 PSPSASRTPTPTPTPTASPTPTLTPTATPTP 449



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 2   PASSNSSSTFPLPLATTYPTPILAPSAAPRPRI 100
           P+ S S S  P P A+  PTP   P+A+P P +
Sbjct: 409 PSPSVSPSPSPSPSASRTPTPTPTPTASPTPTL 441

to top

>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +1

Query: 232  PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAP 399
            PP A      P L   +A   + PP P   PR DP   P     +G  + G P AP
Sbjct: 1028 PPAAAAAAVGPPL-CRLAFEDESPPAPSRWPRSDPESQPLLGGGAGGPSAGAPTAP 1082

to top

>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +1

Query: 232  PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAP 399
            PP A      P L   +A   + PP P   PR DP   P     +G  + G P AP
Sbjct: 1028 PPAAAAAAVGPPL-CRLAFEDESPPAPSRWPRSDPESQPLLGGGAGGPSAGAPTAP 1082

to top

>SELV_HUMAN (P59797) Selenoprotein V|
          Length = 346

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +1

Query: 244 PVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           P P + P L  + AL      VP   P   P  +PT  P   P     P   +  PVR+P
Sbjct: 64  PAPAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTPVPTPARTLTPPVRVP 123

to top

>ODO2_HUMAN (P36957) Dihydrolipoyllysine-residue succinyltransferase component|
           of 2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (EC 2.3.1.61) (Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex) (E2) (E2
          Length = 453

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +1

Query: 142 RSGAVQIRRAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDL 321
           ++GA   +   AEA AA     +     + PP AP+P + P +  S +    G PV    
Sbjct: 145 KTGAAPAKAKPAEAPAAAAPKAEPTAAAVPPPAAPIPTQMPPVP-SPSQPPSGKPVSAVK 203

Query: 322 PRVDPVEIPTAEPASGPHTR 381
           P V P   P A+  +G   R
Sbjct: 204 PTVAP---PLADAGAGKGLR 220

to top

>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
 Frame = +1

Query: 169 AMAEAEAADG----------------GSWQEMMRRILPPGAPVPEEAPN--LDYSIALVY 294
           A AEAEAA+                 G  +   +   PP  P P   P    +YSI L  
Sbjct: 323 AAAEAEAAEAAAAAGEAGPDGAPAAPGEEKAPAKEPTPPKEPTPPPPPPPPFEYSIDLPP 382

Query: 295 DGPPVPY------DLPRVDPVEIPTAEPASGPHTRG 384
           +G  VPY        P  +P  +P AE  + P   G
Sbjct: 383 EGAEVPYVKNYEPPPPGSEPEPVPAAEGEAAPAAEG 418

to top

>MOT8_MOUSE (O70324) Monocarboxylate transporter 8 (MCT 8) (X-linked|
           PEST-containing transporter)
          Length = 565

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 24/81 (29%), Positives = 31/81 (38%)
 Frame = +1

Query: 181 AEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEP 360
           +E A+G   +       P  +PVPE  P             P P   P  +PV +P  EP
Sbjct: 8   SEEAEGPCQEANQEYQEPVCSPVPEPEPE------------PEPEPEPDPEPVPVPPPEP 55

Query: 361 ASGPHTRGLPVAPVVDPVRLP 423
              P  + LP     DP  LP
Sbjct: 56  QPEPEPQPLP-----DPAPLP 71

to top

>ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Tyrosine|
           kinase non-receptor protein 2)
          Length = 1036

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/64 (35%), Positives = 28/64 (43%)
 Frame = +1

Query: 208 QEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGL 387
           QE MR++  PG+P P  +P  D       D P VP   PRV     PT      PH +  
Sbjct: 712 QECMRQLQAPGSPAPSPSPGGD-------DKPQVP---PRVPIPPRPTR-----PHVQLS 756

Query: 388 PVAP 399
           P  P
Sbjct: 757 PAPP 760

to top

>VTP3_TTV1V (P19275) Viral protein TPX|
          Length = 474

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIA-LVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVD 408
           P   P P   P   Y I  +V+D  P P   P   P   PT  P   P     P  P   
Sbjct: 354 PTPTPTPTPTPTPTYDITYVVFDVTPSPTPTPTPTPTPTPTPTPTPTPTPTPTP-TPTPT 412

Query: 409 PVRLP 423
           P   P
Sbjct: 413 PTPTP 417



 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIA-LVYDGPPVPYDLPRVDPVEIPTAEPAS 366
           P   P P   P   Y I  +++D  P P   P   P   PT  P S
Sbjct: 423 PTPTPTPTPTPTPTYDITYVIFDVTPSPTPTPTPTPTPTPTPTPTS 468

to top

>AAAT_RABIT (O19105) Neutral amino acid transporter B(0) (ATB(0))|
           (Sodium-dependent neutral amino acid transporter type 2)
          Length = 541

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
 Frame = +1

Query: 109 GVLTGKGASF*RSGAVQIRRAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIAL 288
           G+LT    +F  S +      M +      G  + + R +LP GA V  +   L   +A 
Sbjct: 340 GILTPLAMAFGTSSSSATLPLMMKCVEERNGVAKHISRFVLPIGATVNMDGAALFQCVAA 399

Query: 289 VYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLP------VAPVVDPVRLPVSRIA 438
           V+        L  V  + I     AS     G+P      +A +++ V LPVS I+
Sbjct: 400 VFIAQLNRQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVSLPVSEIS 455

to top

>PININ_MOUSE (O35691) Pinin|
          Length = 725

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 304 PVPYDLPRVDPVEIPTAEPASGPHTRGLPV---APVVDPVRLPVS 429
           P P   P+  P  +P ++P S PH++  PV    P+  P  LP++
Sbjct: 472 PEPVAQPQPPPQPLPQSQPHSQPHSQPQPVLQSQPLCQPETLPLA 516

to top

>CNTP1_RAT (P97846) Contactin-associated protein 1 precursor (Caspr) (Caspr1)|
            (Neurexin 4) (Neurexin IV) (p190) (Paranodin)
          Length = 1381

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 2    PASSNSSSTFPLPLATTYPTPILAPSAAPRPR 97
            P S  + +  P P  T  PTP  AP++ P PR
Sbjct: 1336 PPSGPAQAPAPTPAPTQVPTPAPAPASGPGPR 1367

to top

>PRAX_MOUSE (O55103) Periaxin|
          Length = 1391

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 17/99 (17%)
 Frame = +1

Query: 163 RRAMAEAEAADGGSWQEMMRRILPPGAP----------VPEEAPNLD-------YSIALV 291
           R+A AEAEAA G  +      ++ P  P          VP+  P+ +       +   L 
Sbjct: 215 RKAKAEAEAATGAGFTAPQIELVGPRLPSAEVGVPQVSVPKGTPSTEAASGFALHLPTLG 274

Query: 292 YDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVD 408
              P  P   P    +++P  E  + P    LP  P +D
Sbjct: 275 LGAPAAPAVEPPATGIQVPQVELPTLPSLPTLPTLPCLD 313

to top

>FTSK_SALTI (Q8Z814) DNA translocase ftsK|
          Length = 1343

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = +1

Query: 175 AEAEAAD--GGSWQEMMRRILPPGAPVPEEAPNLDYSI--ALVYDGPPVPYDLPRVDPVE 342
           AEAE A     S Q+      P GA  P    +LD+S    LV +GP  P   P V P  
Sbjct: 661 AEAELARQFAASQQQRYSGEQPAGAQ-PFSLDDLDFSPMKVLVDEGPHEPLFTPGVMPES 719

Query: 343 IPTAEPASGPHTRGLPVAP 399
            P  +P +       PVAP
Sbjct: 720 TPVQQPVAPQPQYQQPVAP 738

to top

>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 229 LPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPT--AEPASGPHTRGLPVAPV 402
           LPPGAP P   P    S  ++Y  PP P   P +DP    T      +G    G+P AP 
Sbjct: 577 LPPGAPPPPPPPP-PGSAGMMYAPPPPP--PPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633

Query: 403 VDP 411
             P
Sbjct: 634 PPP 636

to top

>DPOL_TUHV2 (Q9YUS2) DNA polymerase (EC 2.7.7.7)|
          Length = 1171

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +1

Query: 259 APNLDYSIALVYDGPPVPYDLPRVD--PVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           A NL YS  L  D P  P   P     P E P A P+   H  G+P A    P R P
Sbjct: 633 AHNLCYSTWL-RDDPGTPARPPETPARPPETPAAGPSGAAHAGGVPGATFRTPFRTP 688

to top

>DPOL_TUHV1 (Q9YUS3) DNA polymerase (EC 2.7.7.7)|
          Length = 1171

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +1

Query: 259 APNLDYSIALVYDGPPVPYDLPRVD--PVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           A NL YS  L  D P  P   P     P E P A P+   H  G+P A    P R P
Sbjct: 633 AHNLCYSTWL-RDDPGTPARPPETPARPPETPAAGPSGAAHAGGVPGATFRTPFRTP 688

to top

>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked|
           PEST-containing transporter) (MCT 7)
          Length = 613

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
 Frame = +1

Query: 175 AEAEAADGGSWQEM-MRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPT 351
           ++A     G WQE    +  P G+P PE  P  +                P  +PV +P 
Sbjct: 79  SQASEEAKGPWQEADQEQQEPVGSPEPESEPEPE----------------PEPEPVPVPP 122

Query: 352 AEPASGPHTRGLPVAPVVDPVRLP 423
            EP   P        P+ DP  LP
Sbjct: 123 PEPQPEPQ-------PLPDPAPLP 139

to top

>IER2_HUMAN (Q9BTL4) Immediate early response gene 2 protein (Protein ETR101)|
          Length = 223

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +1

Query: 145 SGAVQIRRAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLP 324
           +G V  ++A  E +  + G+  E+  R+ PP A      PNL   +   + G      L 
Sbjct: 133 AGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARVLQRRFSG------LL 186

Query: 325 RVDPVEIPTAEPA 363
              P   PTA PA
Sbjct: 187 NCSPAAPPTAPPA 199

to top

>EGR1_MOUSE (P08046) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A)
          Length = 533

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 2   PASSNSSSTFPLPLATTYPTPILAPSAAPRP 94
           PA+S+ SS +P P+AT+YP+P      +P P
Sbjct: 432 PAASSLSS-YPSPVATSYPSPATTSFPSPVP 461

to top

>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
 Frame = +1

Query: 145 SGAVQIRRAMAEAEAADGGSWQEMMRR----ILPPGAP---VPEEAPNLDYSIALVYDGP 303
           SG    R++ +E + ADG +     R+    + P  AP    P+ A       A   +  
Sbjct: 60  SGITLTRKSTSEVKKADGSTVTVETRKKRVVVRPDDAPRAEAPKPAEPAPAPAAAPAEAK 119

Query: 304 PVPYDLPRVDPVEIPTAEPASGPHTRGLP-VAPVVDPVRLPVSR 432
           P P   P+V+    P  EP   P     P   P   P   P  R
Sbjct: 120 PEPKPEPKVEAKPEPKPEPKPEPKVEAKPEPKPEPKPAAAPAPR 163

to top

>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/65 (26%), Positives = 23/65 (35%)
 Frame = +1

Query: 232  PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDP 411
            PP  P P   P L          PP P   P +     P   P   P    +P+  +  P
Sbjct: 2046 PPPPPPPPPPPPLP-------TAPPQPASAPAIPASAPPITSPTIAPAQPSVPLTQLSMP 2098

Query: 412  VRLPV 426
            + LP+
Sbjct: 2099 MELPI 2103

to top

>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = +1

Query: 232  PPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDP 411
            PP  P P   P L  +       PP P   P +     P   P   P    +P+  +  P
Sbjct: 2039 PPPPPPPPPPPPLPAA-------PPQPASTPAIPASAPPITSPTIAPAQPSVPLTQLSMP 2091

Query: 412  VRLPV 426
            + LP+
Sbjct: 2092 MELPI 2096

to top

>EGR1_RAT (P08154) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A)
          Length = 508

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 5   ASSNSSSTFPLPLATTYPTPILAPSAAPRP 94
           ++++S S++P P+AT+YP+P      +P P
Sbjct: 407 SAASSLSSYPSPVATSYPSPATTSFPSPVP 436

to top

>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 160  IRRAMAEAEAADGGSWQEMMRRILPPGAPVPE 255
            I++AM+  EAA  G  + ++ R LP G+P PE
Sbjct: 1313 IKQAMSVREAAVSGPMEGLICRTLPKGSPHPE 1344

to top

>EGR1_HUMAN (P18146) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A) (Transcription factor
           ETR103) (Zinc finger protein 225) (AT225)
          Length = 543

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 10/28 (35%), Positives = 21/28 (75%)
 Frame = +2

Query: 5   ASSNSSSTFPLPLATTYPTPILAPSAAP 88
           ++++S S++P P+AT+YP+P+     +P
Sbjct: 434 SATSSLSSYPSPVATSYPSPVTTSYPSP 461

to top

>NUCM_CAEEL (Q93873) Probable NADH-ubiquinone oxidoreductase 49 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-49KD) (CI-49KD)
          Length = 482

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 229 LPPGAP-VPEEAPNLDYSIALVYDGPPVPY 315
           +PPGA  VP EAP  ++ + LV DG   PY
Sbjct: 410 VPPGATYVPIEAPKGEFGVYLVADGTGKPY 439

to top

>DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC|
           3.1.3.16) (Dual specificity protein phosphatase hVH-5)
          Length = 625

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
 Frame = +1

Query: 142 RSGAVQIRRAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPP-VPYD 318
           RS ++ I+ A A +   DG            PG P P EAP L        D P      
Sbjct: 392 RSFSLDIKSAYAPSRRPDG------------PGPPDPGEAPKL-----CKLDSPSGAALG 434

Query: 319 LPRVDPVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           L    P + P A P + P  R  P  P   P R P
Sbjct: 435 LSSPSP-DSPDAAPEARPRPRRRPRPPAGSPARSP 468

to top

>CK016_HUMAN (Q9NQ32) Protein C11orf16|
          Length = 404

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 392 WRRWSTRSASPCPGSPG 442
           WR W      PCPG PG
Sbjct: 386 WRYWKRNGPEPCPGKPG 402

to top

>GR65_HUMAN (Q9BQQ3) Golgi reassembly-stacking protein 1 (Golgi|
           reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi
           peripheral membrane protein p65) (Golgi phosphoprotein
           5) (GOLPH5)
          Length = 439

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
 Frame = +1

Query: 229 LPPGAPVPEEAPNL-------DYSIALVY-DGPPVPYDLPRVDPVEIPTAEPASGPHTRG 384
           LPPG P PE++P+L       DY  AL+   G  +   LP          +P   PH   
Sbjct: 231 LPPG-PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFME 289

Query: 385 LPVAP------VVDPVRLPVSRIA 438
            P+ P      V+DP  L VS I+
Sbjct: 290 TPLQPPPPVQRVMDPGFLDVSGIS 313

to top

>KGUA_STRKA (Q8GAU4) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 205

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 148 GAVQIRRAMAEAEAA--DGGSWQEMMRRILPPGAPVPE 255
           GA Q+R +MA+A        SW+E++RR+   G   PE
Sbjct: 118 GARQVRESMADAHLVFLAPPSWEELVRRLTGRGTEAPE 155

to top

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +1

Query: 226 ILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASG-PHTRGLPVAPV 402
           +LPP  P P   P L  SI       P P   P V P  +PT+ P  G P +      PV
Sbjct: 501 VLPPSLPPPVMPPALPTSI-------PPPGMPPPVMPPSLPTSVPPPGMPPSLSSGPPPV 553

Query: 403 VDPVRL 420
           + P  L
Sbjct: 554 LPPPAL 559

to top

>PCOC1_RAT (O08628) Procollagen C-endopeptidase enhancer 1 precursor|
           (Procollagen COOH-terminal proteinase enhancer 1)
           (Procollagen C-proteinase enhancer 1) (PCPE-1) (Type I
           procollagen COOH-terminal proteinase enhancer) (Type 1
           procollagen C-proteinase e
          Length = 468

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 298 GPPV-PYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           GP V P   P+V PVE P   PA    T+  PVAP    +  P
Sbjct: 304 GPKVKPPSKPKVQPVEKPEGSPA----TQATPVAPDAPSITCP 342

to top

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 24/74 (32%), Positives = 30/74 (40%)
 Frame = +1

Query: 202 SWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTR 381
           S Q +M   L   AP P +          V +GP +P  LP +   + PTA P       
Sbjct: 631 SQQSVMLGSLADAAPSPAQC----VCSPPVSEGPVLPQSLPSLGAYQQPTAAP------- 679

Query: 382 GLPVAPVVDPVRLP 423
           GLPV  V  P   P
Sbjct: 680 GLPVGSVPAPACPP 693

to top

>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPV---PYDLPRVDPVEIPTAEPASGP 372
           PPG P P   P L  + A  YDG  V   P  +  + P   P A  A GP
Sbjct: 61  PPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGASGAPGP 110

to top

>YN03_CAEEL (Q03607) Hypothetical protein T23G5.3|
          Length = 262

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
 Frame = +1

Query: 235 PGAPVP-------EEAPNLDYSIALVYDGPPVPYDLPRV----DPVEIPTAEPASGPHTR 381
           P  P+P       E  P +  ++ L    PP P  LP +    D V+IP  +P +G +++
Sbjct: 114 PSTPIPNQILTQKENVPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMRKPPTGRNSK 173

Query: 382 GLPVAPVVDPVRLP 423
            +  +   D + LP
Sbjct: 174 KIKTS--ADSISLP 185

to top

>EGR1_POEGU (O73693) Early growth response protein 1 (EGR-1) (Zinc finger|
           protein ZENK) (Fragment)
          Length = 193

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +2

Query: 8   SSNSSSTFPLPLATTYPTPILAPSAAPRP 94
           SS+ ++++P  + TTYP+P+    ++P P
Sbjct: 98  SSSVTTSYPSSITTTYPSPVRTAYSSPAP 126

to top

>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +1

Query: 235  PGAPVPEEAPNLDYSIAL---VYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVV 405
            PG P   +AP    S A+   V  G P P    +   V IP + P+S P+T  +P  P +
Sbjct: 944  PGIPPNHKAPLTMASPAMLGNVESGGPPPPTASQPASVNIPGSLPSSTPYT--MPPEPTL 1001

Query: 406  --DPVRLPVSRIAR 441
              +P+ + +SR+++
Sbjct: 1002 SQNPLSIMMSRMSK 1015

to top

>ZAR1_HUMAN (Q86SH2) Zygote arrest 1 (Oocyte-specific maternal effect factor)|
          Length = 424

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 169 AMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDY 276
           A  + + A GGSWQ+  R  LP  +P    A +L +
Sbjct: 28  AATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLSF 63

to top

>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/67 (31%), Positives = 26/67 (38%)
 Frame = +1

Query: 229 LPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVD 408
           +PP    P  AP +  S A     PPVP   P   P   P+  P S P       +P   
Sbjct: 185 VPPSPAPPSPAPPVPPSPAPPSPAPPVP---PSPAPPSPPSPAPPSPPSPAPPSPSPPAP 241

Query: 409 PVRLPVS 429
           P  +P S
Sbjct: 242 PSPVPPS 248

to top

>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent|
           kinase inhibitor p57) (p57KIP2)
          Length = 316

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 32  PLPLATTYPTPILAPSAAPRP 94
           P P +T  P P+LAP+ AP P
Sbjct: 142 PAPASTPPPVPVLAPAPAPAP 162

to top

>TRA2_CAEBR (Q17307) Sex-determining transformer protein 2 precursor (Cb-Tra-2A)|
          Length = 1497

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 220  RRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPAS 366
            R++       PE++PN +  I LVY  PP  +++P++     P  +P S
Sbjct: 1329 RQVEQVSREAPEDSPNREPRI-LVYQRPPRLHEIPQISHGRNPLHDPPS 1376

to top

>GNDS_HUMAN (Q12967) Ral guanine nucleotide dissociation stimulator (RalGEF)|
           (RalGDS)
          Length = 914

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +1

Query: 241 APVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDP 411
           +PVP   P  +  +AL     P P   P  +P   PT  P S      L VAP   P
Sbjct: 262 SPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGS-----ELEVAPAPAP 313

to top

>MMP25_HUMAN (Q9NPA2) Matrix metalloproteinase-25 precursor (EC 3.4.24.-)|
           (MMP-25) (Membrane-type matrix metalloproteinase 6)
           (MT-MMP 6) (Membrane-type-6 matrix metalloproteinase)
           (MT6-MMP) (Leukolysin)
          Length = 562

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 301 PPVPYDLPRVDPVEIPTAEPASGPHTRGLPV 393
           P  PYD P   P+  P   PAS  H+   P+
Sbjct: 283 PQTPYDKPTRKPLAPPPQPPASPTHSPSFPI 313

to top

>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPV---PYDLPRVDPVEIPTAEPASGP 372
           PPG P P   P L  + A  YDG  V   P  +  + P   P A  A GP
Sbjct: 61  PPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGP 110

to top

>SYP_STRCO (Q9KYR6) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA|
           ligase) (ProRS)
          Length = 567

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/71 (28%), Positives = 28/71 (39%)
 Frame = +1

Query: 166 RAMAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEI 345
           R +A    A GGS  E        G     + PN DY+     +   + + L  VD  ++
Sbjct: 199 RIVAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDYAA----NTEAITFRLTPVDATDV 254

Query: 346 PTAEPASGPHT 378
           P AE    P T
Sbjct: 255 PAAEDIPTPDT 265

to top

>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3259

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
 Frame = +1

Query: 235  PGAPVPEEAPNLDYSIALVYDGP------PVPYDLPRVDPVEIPTAEPASGPHTRGLP 390
            P AP P    + + S A   D P      PVP  +P   P  +  A+PA  P    +P
Sbjct: 2186 PSAPKPSITKSPEPSAATSRDSPQPPAPQPVPEKIPEPKPEPVRAAKPAQPPLALQMP 2243

to top

>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 292 YDGPPVPYDLPRVDPVEIPTAEP 360
           YD P  PYDLP   P ++P  +P
Sbjct: 349 YDAPYPPYDLPYHTPYDVPYFDP 371



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133  SF*RSGAVQIRRAMA-EAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPV 309
            +F    AV + R M  +A A         +R +     P PE  P        V  GPP 
Sbjct: 2456 AFIHKQAVLLARGMTLQATALQQQPLSAALRSLPAEKPPAPEAQPTS------VGTGPPA 2509

Query: 310  PYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDPV 414
               L R  P  +  A  A  P    LP+ PV  PV
Sbjct: 2510 KPVLLRATPKPLAPAPLAKAPR---LPIKPVAAPV 2541

to top

>TRA1_CAEBR (Q17308) Sex-determining transformer protein 1|
          Length = 1165

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 337 VEIPTAEPASGPHTRGLPVAPVVD--PVRLPVSRIARCGE 450
           ++IPT+ PA+ P     PVAPV    PV  P S +A   E
Sbjct: 610 MDIPTSVPAAVPVAPVAPVAPVAPAAPVAPPASSLAEATE 649

to top

>TRYU_DROME (P42279) Trypsin eta precursor (EC 3.4.21.4)|
          Length = 262

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +1

Query: 247 VPEEAPN---LDYSIALVYDGPPVPYD-LPRVDPVEIPTAEPASG 369
           +P E  N   +D  IALV   PP+P D    ++ +EI + +PA G
Sbjct: 107 IPHELYNSSTMDNDIALVVVDPPLPLDSFSTMEAIEIASEQPAVG 151

to top

>IE68_EHV4 (P18346) Immediate-early protein IE68 (ORF4) (Fragment)|
          Length = 273

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +1

Query: 214 MMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTR-GLP 390
           M +R  P  +P+    P+L  S      G P P    R+D V +P   P    H   GLP
Sbjct: 5   MSQRGAPSTSPI---IPSLSPSSG----GNPSPRSSQRIDSVRVPARLPGGSDHPEYGLP 57

Query: 391 VAP 399
           ++P
Sbjct: 58  LSP 60

to top

>FLNA_MOUSE (Q8BTM8) Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial|
            actin-binding protein) (Actin-binding protein 280)
            (ABP-280) (Nonmuscle filamin)
          Length = 2646

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 22/85 (25%)
 Frame = +1

Query: 196  GGSWQEMMRRILPPGAPVP-------------------EEAPNLDYSIALVYDGPPV--- 309
            GG  +   + + P GA VP                   EE P   Y + + YDG PV   
Sbjct: 998  GGQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVPREEGP---YEVEVTYDGVPVPGS 1054

Query: 310  PYDLPRVDPVEIPTAEPASGPHTRG 384
            P+ L  V P + P+   A GP  +G
Sbjct: 1055 PFPLEAVAPTK-PSKVKAFGPGLQG 1078

to top

>DPOLM_HUMAN (Q9NP87) DNA polymerase mu (EC 2.7.7.7) (Pol Mu)|
          Length = 494

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/67 (28%), Positives = 26/67 (38%)
 Frame = +1

Query: 172 MAEAEAADGGSWQEMMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPT 351
           M E  A +  SWQE      PPG   P    ++ +    +  G PVP +        +  
Sbjct: 71  MEETSAEEAVSWQERRMAAAPPGC-TPPALLDISWLTESLGAGQPVPVECRH----RLEV 125

Query: 352 AEPASGP 372
           A P  GP
Sbjct: 126 AGPRKGP 132

to top

>PCOC1_MOUSE (Q61398) Procollagen C-endopeptidase enhancer 1 precursor|
           (Procollagen COOH-terminal proteinase enhancer 1)
           (Procollagen C-proteinase enhancer 1) (PCPE-1) (Type I
           procollagen COOH-terminal proteinase enhancer) (Type 1
           procollagen C-proteinase
          Length = 468

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 298 GPPV-PYDLPRVDPVEIPTAEPASGPHTRGLPVAPVVDPVRLP 423
           GP V P   P+  P E P A PA    T+  PVAP    +  P
Sbjct: 304 GPKVKPPTKPKSQPAETPEASPA----TQATPVAPAAPSITCP 342

to top

>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)|
          Length = 618

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +1

Query: 193 DGGSWQE-MMRRILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASG 369
           D  SW E M+  +  P  P+P   P L+ S +    G    +DLP       P+ + +S 
Sbjct: 94  DLSSWVESMLSELNAPPPPLPPAPPQLNASTSSTVTGGGGYFDLP-------PSVDSSSS 146

Query: 370 PHTRGLPVAPVVDPVRLPVSRI 435
            +     ++P V P  L    +
Sbjct: 147 TYALRPIISPPVAPADLSADSV 168

to top

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/69 (27%), Positives = 25/69 (36%)
 Frame = +1

Query: 223 RILPPGAPVPEEAPNLDYSIALVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPV 402
           R   P  P P   P            P  P  LP   P  +P   PA+ P     P+AP 
Sbjct: 411 RTSTPPVPTPPSLP------------PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458

Query: 403 VDPVRLPVS 429
           + P  +P +
Sbjct: 459 L-PAGMPAA 466

to top

>ETS6_DROME (P29776) DNA-binding protein D-ETS-6|
          Length = 475

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  PLPLATTYPTPILAPSAAPRPR 97
           PLPLAT  P  + +P  AP PR
Sbjct: 110 PLPLATPTPPAVSSPHQAPSPR 131

to top

>POLG_BOVEV (P12915) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2174

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = +1

Query: 229 LPPGAPVPEEAPNLDY------SIALVYDGPPVPYDLP 324
           +PPGAPVP    +  +      S+    DGPP  + +P
Sbjct: 704 VPPGAPVPSNQDSFQWQSGCNPSVFADTDGPPAQFSVP 741

to top

>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 828

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 130 ASF*RSGAVQIRRAMAEAEAADG--GSWQEMMRRILPPGAPVPEEAP 264
           AS  RS A   RR++  A  +     SWQ + R  +PP +P P  AP
Sbjct: 319 ASDRRSDAGSYRRSLGSAGPSGTLPRSWQPVSRIPMPPSSPQPRGAP 365

to top

>SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)|
          Length = 535

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
 Frame = +1

Query: 241 APVPEEAPNLDYSIA------LVYDGPPVPYDLPRVDPVEIPTAEPASGPHTRGLPVAPV 402
           AP+PE  P+   +I+      +     P P   P   P   PT  P   P  +     PV
Sbjct: 446 APIPEPKPSPSPTISPQPSPTISIPVTPAPVPKPSPSPTPKPTVPPQISPTPQPSNTVPV 505

Query: 403 VDPVRLP 423
           + P   P
Sbjct: 506 IPPPENP 512

to top

>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
 Frame = +1

Query: 232 PPGAPVPEEAPNLDYSIALVYDGPPVPYDL----PRVDPVEIPTAEPASGPHTRGLPVAP 399
           PPG P P++ P            PP P+      P   P+ +       GP   G P AP
Sbjct: 303 PPGPPPPQQGPP-----------PPGPFPPRPPGPLGPPLGLAPPPHMQGPPPGGPPPAP 351

Query: 400 VVDPVRLP 423
            V+P   P
Sbjct: 352 HVNPAFFP 359

to top

>GRC3_CRYNE (Q5KI47) Protein GRC3|
          Length = 744

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 5   ASSNSSSTFPLPLATTYPTPILAPSAAPRP 94
           A S S S+FP+   T++P P+++P++   P
Sbjct: 213 ALSPSMSSFPVYAPTSHPLPVISPASTQAP 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,735,474
Number of Sequences: 219361
Number of extensions: 677918
Number of successful extensions: 3990
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 3210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3898
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result