ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl08b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 904 0.0
2gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 305 8e-80
3gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 301 1e-78
4gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 222 9e-55
5gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 204 2e-49
6gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 204 2e-49
7ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 202 8e-49
8dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 1e-44
10gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 188 1e-44
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
12emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 186 5e-44
13gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 176 5e-41
14ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 172 7e-40
15gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 135 2e-28
16gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 135 2e-28
17gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 117 4e-23
18gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 115 1e-22
19ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 84 5e-13
20ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 84 5e-13
21gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 84 5e-13
22dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
23dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
24gb|AY103567.1| Zea mays PCO116252 mRNA sequence 80 8e-12
25ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
26dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 m... 58 3e-05
27dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
28gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 54 5e-04
29gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
31dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
32dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
34gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.45
35ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 1.8
36gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-car... 42 1.8
37emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 1.8
38gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.0
39gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
40gb|BC049093.1| Mus musculus wingless-related MMTV integration si... 40 7.0
41gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.0
42gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.0
43gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.0
44gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.0
45gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 7.0
46emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 7.0
47gb|AC122039.4| Mus musculus BAC clone RP24-432H3 from chromosome... 40 7.0
48ref|NM_009527.2| Mus musculus wingless-related MMTV integration ... 40 7.0
49gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosom... 40 7.0
50gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.0
51gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 40 7.0
52ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG119... 40 7.0
53emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.0
54emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 7.0
55gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 40 7.0
56dbj|AK004683.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 7.0
57gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.0
58dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.0
59ref|XM_342723.2| PREDICTED: Rattus norvegicus wingless-related M... 40 7.0
60dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.0
61dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
62gb|BC057586.1| Mus musculus wingless-related MMTV integration si... 40 7.0
63gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.0
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.0
65dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.0
66gb|M89801.1|MUSWNTVIIA Mouse Wnt-7a mRNA, complete cds 40 7.0

>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  904 bits (456), Expect = 0.0
 Identities = 508/520 (97%), Gaps = 4/520 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60
           |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4   acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60

                                                                       
Query: 61  gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 120
            |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 61  -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119

                                                                       
Query: 121 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179

                                                                       
Query: 181 caccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 240
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 239

                                                                       
Query: 241 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 299

                                                                       
Query: 301 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 359

                                                                       
Query: 361 cgtcaccttcgactggtcggtggacaagctgggggtgccggacgccatcatcgtcaagaa 420
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 360 cgtcaccttcgactggtcggtggacaagctgggggtgccgggggccatcatcgtcaagaa 419

                                                                       
Query: 421 caaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 479

                                                   
Query: 481 caccatcgtcttcgtcgccaactcatgggtctacccgcag 520
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caccatcgtcttcgtcgccaactcatgggtctacccgcag 519



to top

>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  305 bits (154), Expect = 8e-80
 Identities = 336/397 (84%), Gaps = 6/397 (1%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173

                                                                       
Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 174 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 233

                                                                       
Query: 242 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 301
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 234 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 293

                                                                       
Query: 302 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 361
           |||||||||||      ||||| ||||||||   | || |||||||||  |||||||| |
Sbjct: 294 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 347

                                                                       
Query: 362 gtcaccttcgactggtcggtggacaagctgggggtgccggacgccatcatcgtcaagaac 421
           ||||| |||||||||  |||||| |||||||| |||||||  ||| || |||||||||||
Sbjct: 348 gtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtcgtcaagaac 407

                                                                       
Query: 422 aaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggc 481
           ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 408 aaccacgccgccgagttcttcctcaagacaatcaccctcgacgacgtgcccggccgcggc 467

                                                
Query: 482 accatcgtcttcgtcgccaactcatgggtctacccgc 518
            || ||  ||||||||||||||| |||||||||||||
Sbjct: 468 gccgtcaacttcgtcgccaactcctgggtctacccgc 504



to top

>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  301 bits (152), Expect = 1e-78
 Identities = 334/395 (84%), Gaps = 6/395 (1%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111

                                                                       
Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 112 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 171

                                                                       
Query: 242 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 301
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 172 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 231

                                                                       
Query: 302 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 361
           |||||||||||      ||||| ||||||||   | || |||||||||  |||||||| |
Sbjct: 232 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 285

                                                                       
Query: 362 gtcaccttcgactggtcggtggacaagctgggggtgccggacgccatcatcgtcaagaac 421
           ||||| |||||||||  |||||| |||||||| |||||||  ||| || |||||||||||
Sbjct: 286 gtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtcgtcaagaac 345

                                                                       
Query: 422 aaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggc 481
           ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 346 aaccacgccgccgagttcttcctcaagacaatcaccctcgacgacgtgcccggccgcggc 405

                                              
Query: 482 accatcgtcttcgtcgccaactcatgggtctaccc 516
            || ||  ||||||||||||||| |||||||||||
Sbjct: 406 gccgtcaccttcgtcgccaactcctgggtctaccc 440



to top

>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  222 bits (112), Expect = 9e-55
 Identities = 160/176 (90%)
 Strand = Plus / Plus

                                                                       
Query: 345 gcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccggacg 404
           |||||||| |||||  ||||||||||||||||  |||||| |||| |||  | |||| ||
Sbjct: 290 gcgagaaccagttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcg 349

                                                                       
Query: 405 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgaca 464
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 350 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcaacg 409

                                                                   
Query: 465 acgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 520
           |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 410 acgtccccggccacggcaccatcgtcttcgtcgccaactcatggatctacccgcag 465



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccacaa 261
           |||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||  ||
Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212

                                                              
Query: 262 caacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 312
           ||||||    ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263



to top

>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score =  204 bits (103), Expect = 2e-49
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                        
Query: 342  ccggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgg 401
            |||||||| || |||||  ||||||||||||||||  |||||| ||||  || || ||||
Sbjct: 2808 ccggcgaggaccagttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgg 2867

                                                                        
Query: 402  acgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcg 461
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2868 gcgccatcatcgtgaagaacaaccacgcctccgagttcttcctcaagaccatcaccatcg 2927

                                                                       
Query: 462  acaacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctacccgcag 520
            || |||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 2928 acgacgtccccggccacggccccatcgtcttcgtcgccaactcatgggtgtacccgcag 2986



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                        
Query: 186  tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagctcca 245
            ||||||||||| ||  |||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 246  ccaacgtcgacc 257
            ||  ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 272  cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 317
            ||||||||||||||   |||||||| ||||||||||||||| ||||
Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789



to top

>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  204 bits (103), Expect = 2e-49
 Identities = 198/230 (86%), Gaps = 6/230 (2%)
 Strand = Plus / Plus

                                                                        
Query: 287  gcggaggcgaacctggagcagtggctcctgccgacgaacctgccgttcatcaccaccggc 346
            ||||||||||||||||||||||||||      ||||| ||||||||   | || ||||||
Sbjct: 945  gcggaggcgaacctggagcagtggct------gacgagcctgccgtcgctgacgaccggc 998

                                                                        
Query: 347  gagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccggacgcc 406
            |||  |||||||| |||||| |||||||||  |||||| |||||||| |||||||  |||
Sbjct: 999  gagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggggcc 1058

                                                                        
Query: 407  atcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaac 466
             || |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||
Sbjct: 1059 gtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctcgacgac 1118

                                                              
Query: 467  gtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
            ||||||||||||||| || ||  ||||||||||||||| |||||||||||
Sbjct: 1119 gtgcccggccgcggcgccgtcaccttcgtcgccaactcctgggtctaccc 1168



 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259

                                                                       
Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 260 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 319

                          
Query: 242 tccaccaacgtcgac 256
           ||||||  |||||||
Sbjct: 320 tccaccctcgtcgac 334



to top

>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  202 bits (102), Expect = 8e-49
 Identities = 174/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 42  cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101

                                                                       
Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 161

                                                                       
Query: 235 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 294
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 162 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 221

                             
Query: 295 gaacctggagcagtggct 312
           || |||||||||||||||
Sbjct: 222 gagcctggagcagtggct 239



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                       
Query: 403 cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 324 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 383

                                                                 
Query: 463 caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
           |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 384 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 437



to top

>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  202 bits (102), Expect = 8e-49
 Identities = 174/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216

                                                                       
Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 276

                                                                       
Query: 235 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 294
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 277 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 336

                             
Query: 295 gaacctggagcagtggct 312
           || |||||||||||||||
Sbjct: 337 gagcctggagcagtggct 354



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                       
Query: 403 cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 498

                                                                 
Query: 463 caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
           |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 499 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 552



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 1e-44
 Identities = 131/143 (91%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360

                                                                            
Query: 175      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30023420

                                       
Query: 235      catcagctccaccaacgtcgacc 257
                | |||||||| ||  ||||||||
Sbjct: 30023421 cgtcagctcctccctcgtcgacc 30023443



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                            
Query: 403      cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 30023661 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 30023720

                                                                      
Query: 463      caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
                |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 30023721 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 30023774



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816

                                                                            
Query: 182      accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
                |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 27798817 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27798876

                                
Query: 242      tccaccaacgtcgacc 257
                ||||||  ||||||||
Sbjct: 27798877 tccaccgccgtcgacc 27798892



 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                            
Query: 383      gacaagctgggggtgccggacgccatcatcgtcaagaacaaccacgcctccgagttcttc 442
                |||||||| || |||||||  |||||||||||||||||| |||||  |  ||||||||||
Sbjct: 27799413 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 27799472

                                                                            
Query: 443      ctcaagaccatcaccctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgcc 499
                ||||||||||||||||||||| |||| ||||||||   |||| || |||||||| |||||
Sbjct: 27799473 ctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgcc 27799532

                                 
Query: 500      aactcatgggtctaccc 516
                ||||| |||||||||||
Sbjct: 27799533 aactcctgggtctaccc 27799549



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 431      tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
                ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 27816818 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 27816877

                                          
Query: 491      ttcgtcgccaactcatgggtctaccc 516
                |||||||||||||| ||| |||||||
Sbjct: 27816878 ttcgtcgccaactcgtggatctaccc 27816903



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 275      gggaaggtgggcgcggaggcgaacctggagcagtggct 312
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 404      gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
                ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 27758816 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 27758872



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 275      gggaaggtgggcgcggaggcgaacctggagcagtggct 312
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052



to top

>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  188 bits (95), Expect = 1e-44
 Identities = 131/143 (91%)
 Strand = Plus / Minus

                                                                         
Query: 115   cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
             ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391

                                                                         
Query: 175   cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
             ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 84331

                                    
Query: 235   catcagctccaccaacgtcgacc 257
             | |||||||| ||  ||||||||
Sbjct: 84330 cgtcagctcctccctcgtcgacc 84308



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Minus

                                                                         
Query: 403   cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 84090 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 84031

                                                                   
Query: 463   caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
             |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 84030 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 83977



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 275   gggaaggtgggcgcggaggcgaacctggagcagtggct 312
             |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 1e-44
 Identities = 131/143 (91%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782

                                                                            
Query: 175      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30114842

                                       
Query: 235      catcagctccaccaacgtcgacc 257
                | |||||||| ||  ||||||||
Sbjct: 30114843 cgtcagctcctccctcgtcgacc 30114865



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                            
Query: 403      cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 30115083 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 30115142

                                                                      
Query: 463      caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
                |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 30115143 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 30115196



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140

                                                                            
Query: 182      accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
                |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 27890141 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27890200

                                
Query: 242      tccaccaacgtcgacc 257
                ||||||  ||||||||
Sbjct: 27890201 tccaccgccgtcgacc 27890216



 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                            
Query: 383      gacaagctgggggtgccggacgccatcatcgtcaagaacaaccacgcctccgagttcttc 442
                |||||||| || |||||||  |||||||||||||||||| |||||  |  ||||||||||
Sbjct: 27890737 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 27890796

                                                                            
Query: 443      ctcaagaccatcaccctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgcc 499
                ||||||||||||||||||||| |||| ||||||||   |||| || |||||||| |||||
Sbjct: 27890797 ctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgcc 27890856

                                 
Query: 500      aactcatgggtctaccc 516
                ||||| |||||||||||
Sbjct: 27890857 aactcctgggtctaccc 27890873



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 431      tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
                ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 27908142 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 27908201

                                          
Query: 491      ttcgtcgccaactcatgggtctaccc 516
                |||||||||||||| ||| |||||||
Sbjct: 27908202 ttcgtcgccaactcgtggatctaccc 27908227



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 275      gggaaggtgggcgcggaggcgaacctggagcagtggct 312
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 404      gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
                ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 27850139 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 27850195



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 275      gggaaggtgggcgcggaggcgaacctggagcagtggct 312
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375



to top

>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  186 bits (94), Expect = 5e-44
 Identities = 172/198 (86%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198

                                                                       
Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234
           ||||||||||||||| ||  || || ||||| ||||||||||||||||||||||||||||
Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgccagct 258

                                                                       
Query: 235 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 294
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 259 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 318

                             
Query: 295 gaacctggagcagtggct 312
           || |||||||||||||||
Sbjct: 319 gagcctggagcagtggct 336



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                       
Query: 403 cgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcga 462
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 421 cgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcga 480

                                                                 
Query: 463 caacgtgcccggccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
           |||||| ||||||| |||| || ||||||||||||||||||| ||| |||||||
Sbjct: 481 caacgtccccggccacggcgccgtcgtcttcgtcgccaactcctggatctaccc 534



to top

>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  176 bits (89), Expect = 5e-41
 Identities = 164/189 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182

                                                                       
Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
           ||| |||| |||||| ||  |||| ||||||||   ||||||||||||||||| ||||||
Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 242

                                                                       
Query: 242 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 301
           ||||||  |||||||||  ||||||| || |||||||||||||||||||||||| | |||
Sbjct: 243 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 302

                    
Query: 302 gagcagtgg 310
           |||||||||
Sbjct: 303 gagcagtgg 311



 Score =  115 bits (58), Expect = 1e-22
 Identities = 141/168 (83%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                       
Query: 352 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccggacgccatcat 411
           |||||||| | ||||||||||||||  |||||| ||||| |||||||||| ||||||| |
Sbjct: 347 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 406

                                                                       
Query: 412 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 471
           |||||| ||| |||||  |||||||||| | || || |||||||||||| || |||| ||
Sbjct: 407 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 466

                                                           
Query: 472 cggccgc---ggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
           |||||||   |||| | ||  ||||||||||||||||||| |||||||
Sbjct: 467 cggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccc 514



to top

>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  172 bits (87), Expect = 7e-40
 Identities = 165/191 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111

                                                                       
Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
           |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 112 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 171

                                                                       
Query: 242 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 301
           ||||||  ||||||||  ||||||||    || ||||||||||| |||||||||| ||||
Sbjct: 172 tccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctg 231

                      
Query: 302 gagcagtggct 312
           |||||||||||
Sbjct: 232 gagcagtggct 242



 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 383 gacaagctgggggtgccggacgccatcatcgtcaagaacaaccacgcctccgagttcttc 442
           |||||||| || |||||||  |||||||||||||||||| |||||  |  ||||||||||
Sbjct: 310 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 369

                                                                       
Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgcc 499
           ||||||||||||||||||||| |||| ||||||||   |||| || |||||||| |||||
Sbjct: 370 ctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgcc 429

                            
Query: 500 aactcatgggtctaccc 516
           ||||| |||||||||||
Sbjct: 430 aactcctgggtctaccc 446



to top

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                         
Query: 122   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946

                                                                         
Query: 182   accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
             |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 42947 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 43006

                             
Query: 242   tccaccaacgtcgacc 257
             ||||||  ||||||||
Sbjct: 43007 tccaccgccgtcgacc 43022



 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                         
Query: 383   gacaagctgggggtgccggacgccatcatcgtcaagaacaaccacgcctccgagttcttc 442
             |||||||| || |||||||  |||||||||||||||||| |||||  |  ||||||||||
Sbjct: 43543 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 43602

                                                                         
Query: 443   ctcaagaccatcaccctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgcc 499
             ||||||||||||||||||||| |||| ||||||||   |||| || |||||||| |||||
Sbjct: 43603 ctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgcc 43662

                              
Query: 500   aactcatgggtctaccc 516
             ||||| |||||||||||
Sbjct: 43663 aactcctgggtctaccc 43679



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 431   tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
             ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 60948 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 61007

                                       
Query: 491   ttcgtcgccaactcatgggtctaccc 516
             |||||||||||||| ||| |||||||
Sbjct: 61008 ttcgtcgccaactcgtggatctaccc 61033



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 275   gggaaggtgggcgcggaggcgaacctggagcagtggct 312
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 404  gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
            ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 2945 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 3001



to top

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 122   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077

                                                                         
Query: 182   accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
             |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 15076 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 15017

                             
Query: 242   tccaccaacgtcgacc 257
             ||||||  ||||||||
Sbjct: 15016 tccaccgccgtcgacc 15001



 Score =  125 bits (63), Expect = 2e-25
 Identities = 119/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Minus

                                                                         
Query: 383   gacaagctgggggtgccggacgccatcatcgtcaagaacaaccacgcctccgagttcttc 442
             |||||||| || |||||||  |||||||||||||||||| |||||  |  ||||||||||
Sbjct: 14480 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 14421

                                                                         
Query: 443   ctcaagaccatcaccctcgacaacgtgcccggccg---cggcaccatcgtcttcgtcgcc 499
             ||||||||||||||||||||| |||| ||||||||   |||| || |||||||| |||||
Sbjct: 14420 ctcaagaccatcaccctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgcc 14361

                              
Query: 500   aactcatgggtctaccc 516
             ||||| |||||||||||
Sbjct: 14360 aactcctgggtctaccc 14344



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 275   gggaaggtgggcgcggaggcgaacctggagcagtggct 312
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 404   gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
             ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 55078 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 55022



to top

>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score =  117 bits (59), Expect = 4e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 146 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 205
           ||||||||||| |||||| ||||||||||||||||||||||| | |   ||||| |||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 206 ctcctcggccgcggcgtcacctgccagctcatcagctcc 244
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99



 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 415 caagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccgg 474
           ||||||| |||||||| ||| | || ||||||||||||||||||||| |||||| |||||
Sbjct: 264 caagaaccaccacgccgccggggtcgtcctcaagaccatcaccctcgccaacgtccccgg 323

                                                     
Query: 475 ccgcggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
           || |||| || ||||||||||||||||||| |||||||||||
Sbjct: 324 ccacggcgccgtcgtcttcgtcgccaactcctgggtctaccc 365



to top

>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  115 bits (58), Expect = 1e-22
 Identities = 141/168 (83%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 352  caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccggacgccatcat 411
            |||||||| | ||||||||||||||  |||||| ||||| |||||||||| ||||||| |
Sbjct: 4340 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 4399

                                                                        
Query: 412  cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 471
            |||||| ||| |||||  |||||||||| | || || |||||||||||| || |||| ||
Sbjct: 4400 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 4459

                                                            
Query: 472  cggccgc---ggcaccatcgtcttcgtcgccaactcatgggtctaccc 516
            |||||||   |||| | ||  ||||||||||||||||||| |||||||
Sbjct: 4460 cggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccc 4507



 Score =  115 bits (58), Expect = 1e-22
 Identities = 109/126 (86%)
 Strand = Plus / Plus

                                                                        
Query: 122  ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
            ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625

                                                                        
Query: 182  accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 241
            ||| |||| |||||| ||  |||| ||||||||   ||||||||||||||||| ||||||
Sbjct: 3626 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 3685

                  
Query: 242  tccacc 247
            ||||||
Sbjct: 3686 tccacc 3691



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 261  acaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 310
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304



to top

>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 431 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
           ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 185 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 244

                                     
Query: 491 ttcgtcgccaactcatgggtctaccc 516
           |||||||||||||| ||| |||||||
Sbjct: 245 ttcgtcgccaactcgtggatctaccc 270



to top

>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 431 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
           ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 664 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 723

                                     
Query: 491 ttcgtcgccaactcatgggtctaccc 516
           |||||||||||||| ||| |||||||
Sbjct: 724 ttcgtcgccaactcgtggatctaccc 749



to top

>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
           lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 431 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
           ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 658 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 717

                                     
Query: 491 ttcgtcgccaactcatgggtctaccc 516
           |||||||||||||| ||| |||||||
Sbjct: 718 ttcgtcgccaactcgtggatctaccc 743



to top

>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
           insert sequence
          Length = 2851

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 431 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
           ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 336 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 395

                                     
Query: 491 ttcgtcgccaactcatgggtctaccc 516
           |||||||||||||| ||| |||||||
Sbjct: 396 ttcgtcgccaactcgtggatctaccc 421



to top

>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
           insert sequence
          Length = 3167

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 431 tccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtc 490
           ||||||||||||||||||||  |||||||||||  ||| ||||||   |||||| |||||
Sbjct: 665 tccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtc 724

                                     
Query: 491 ttcgtcgccaactcatgggtctaccc 516
           |||||||||||||| ||| |||||||
Sbjct: 725 ttcgtcgccaactcgtggatctaccc 750



to top

>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                       
Query: 432 ccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgtct 491
           |||||||||||||||||||  ||||||||||   ||| || |||   |||||| ||||||
Sbjct: 608 ccgagttcttcctcaagacgctcaccctcgagggcgtcccaggcaagggcaccgtcgtct 667

                                       
Query: 492 tcgtcgccaactcatgggtctacccgca 519
           ||||||||||||| ||||||||||||||
Sbjct: 668 tcgtcgccaactcgtgggtctacccgca 695



to top

>ref|XM_469401.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2726

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 404 gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
           ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 325 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 381



to top

>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for
           9-lipoxigenase, complete cds
          Length = 2988

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 404 gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
           ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 391 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 447



to top

>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full
           insert sequence
          Length = 2830

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 404 gccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460
           ||||||||| |||||||| |||||    || ||||||||||||||||||||||||||
Sbjct: 399 gccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctc 455



to top

>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 430 ctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcggcaccatcgt 489
           |||||||| | | ||||||||  |||||||| ||  ||| ||||||   |||||| ||||
Sbjct: 505 ctccgagtacctgctcaagacgctcaccctccacggcgtccccggcaagggcaccgtcgt 564

                                      
Query: 490 cttcgtcgccaactcatgggtctaccc 516
           ||||||||||||||| ||| |||||||
Sbjct: 565 cttcgtcgccaactcctggatctaccc 591



to top

>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 434    gagttcttcctcaagaccatcaccctcgaca 464
              ||||||||| |||| ||||||||||||||||
Sbjct: 134348 gagttcttcgtcaacaccatcaccctcgaca 134378



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 434      gagttcttcctcaagaccatcaccctcgaca 464
                ||||||||| |||| ||||||||||||||||
Sbjct: 20827287 gagttcttcgtcaacaccatcaccctcgaca 20827317



to top

>dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M03, full
           insert sequence
          Length = 2930

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 434 gagttcttcctcaagaccatcaccctcgaca 464
           ||||||||| |||| ||||||||||||||||
Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447



to top

>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full
           insert sequence
          Length = 3010

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 434 gagttcttcctcaagaccatcaccctcgaca 464
           ||||||||| |||| ||||||||||||||||
Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 434      gagttcttcctcaagaccatcaccctcgaca 464
                ||||||||| |||| ||||||||||||||||
Sbjct: 21137522 gagttcttcgtcaacaccatcaccctcgaca 21137552



to top

>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 154  cgcgctcgacttcaacgacttcggcg 179
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494



to top

>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



to top

>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase
           mRNA, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 175 cggcgccaccgtcatggacggcgtcaccg 203
           ||||||||| ||||||||||||| |||||
Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428



to top

>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



to top

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    atcaccctcgacaacgtgcc 471
              ||||||||||||||||||||
Sbjct: 301337 atcaccctcgacaacgtgcc 301318



to top

>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggcgtcggcggcatcgtgag 90
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287



to top

>gb|BC049093.1| Mus musculus wingless-related MMTV integration site 7A, mRNA (cDNA
           clone MGC:61336 IMAGE:6415801), complete cds
          Length = 3189

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 419 gccggacgccatcatcgtca 438



to top

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 358     cgccgtcaccttcgactggtcggtggac 385
               ||||| ||||||||| ||||||||||||
Sbjct: 3465594 cgccggcaccttcgaatggtcggtggac 3465621



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gctcctgccgacgaacctgc 329
              ||||||||||||||||||||
Sbjct: 137505 gctcctgccgacgaacctgc 137486



to top

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 324    acctgccgttcatcaccaccggcg 347
              ||||||||||||||| ||||||||
Sbjct: 288875 acctgccgttcatcatcaccggcg 288852



to top

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 324    acctgccgttcatcaccaccggcg 347
              ||||||||||||||| ||||||||
Sbjct: 153202 acctgccgttcatcatcaccggcg 153225



to top

>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     cggcggcatcgtgagcgacctgac 99
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659



to top

>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    cggcggcatcgtgagcgacctgac 99
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099



to top

>gb|AC122039.4| Mus musculus BAC clone RP24-432H3 from chromosome 6, complete
            sequence
          Length = 169274

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  gccggacgccatcatcgtca 416
            ||||||||||||||||||||
Sbjct: 1540 gccggacgccatcatcgtca 1521



to top

>ref|NM_009527.2| Mus musculus wingless-related MMTV integration site 7A (Wnt7a),
           mRNA
          Length = 3177

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 426 gccggacgccatcatcgtca 445



to top

>gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosome 6, complete sequence
          Length = 208350

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    gccggacgccatcatcgtca 416
              ||||||||||||||||||||
Sbjct: 127207 gccggacgccatcatcgtca 127226



to top

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     agctcctcggccgcggcgtc 223
               ||||||||||||||||||||
Sbjct: 1962239 agctcctcggccgcggcgtc 1962220



to top

>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228052

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   agctcatcagctccaccaac 250
             ||||||||||||||||||||
Sbjct: 82121 agctcatcagctccaccaac 82102



to top

>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C
           (LOC661050), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 caccaacgtcgaccacaaca 263
           ||||||||||||||||||||
Sbjct: 239 caccaacgtcgaccacaaca 220



to top

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     gccgttcatcaccaccggcg 347
               ||||||||||||||||||||
Sbjct: 1867059 gccgttcatcaccaccggcg 1867040



to top

>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ggcgtcggcggcatcgtgag 90
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003



to top

>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   acctggagcagtggctcctg 316
             ||||||||||||||||||||
Sbjct: 78731 acctggagcagtggctcctg 78750



to top

>dbj|AK004683.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200010A19 product:WINGLESS-RELATED MMTV
           INTEGRATION SITE 7A, full insert sequence
          Length = 3177

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 426 gccggacgccatcatcgtca 445



to top

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 174     tcggcgccaccgtcatggacggcg 197
               ||||||||| ||||||||||||||
Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 71      ggcgtcggcggcatcgtgagcgac 94
               |||||||||||||||||| |||||
Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412



to top

>ref|XM_342723.2| PREDICTED: Rattus norvegicus wingless-related MMTV integration site
           7A (Wnt7a), mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 459 gccggacgccatcatcgtca 478



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 475     ccgcggcaccatcgtcttcg 494
               ||||||||||||||||||||
Sbjct: 2565281 ccgcggcaccatcgtcttcg 2565300



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     ggcgtcggcggcatcgtgagcgac 94
              |||||||||||||||||| |||||
Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    tgcgcaagaacgcgctcgacttca 167
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773



to top

>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ggcgtcggcggcatcgtgag 90
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594



to top

>gb|BC057586.1| Mus musculus wingless-related MMTV integration site 7A, mRNA (cDNA
           clone MGC:67108 IMAGE:6415801), complete cds
          Length = 3189

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 419 gccggacgccatcatcgtca 438



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 190     ggacggcgtcaccgagctcctcggccgcggcg 221
               ||||||||| | |||| |||||||||||||||
Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     ggcgtcggcggcatcgtgagcgac 94
              |||||||||||||||||| |||||
Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756



to top

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     cggacgccatcatcgtcaag 418
               ||||||||||||||||||||
Sbjct: 1199098 cggacgccatcatcgtcaag 1199117



to top

>gb|M89801.1|MUSWNTVIIA Mouse Wnt-7a mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccggacgccatcatcgtca 416
           ||||||||||||||||||||
Sbjct: 165 gccggacgccatcatcgtca 184


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,053,141
Number of Sequences: 3902068
Number of extensions: 3053141
Number of successful extensions: 67461
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65689
Number of HSP's gapped (non-prelim): 1757
length of query: 520
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 497
effective length of database: 17,143,297,704
effective search space: 8520218958888
effective search space used: 8520218958888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top