>HOX1A_MAIZE (P46605) Homeobox protein HOX1A|
          Length = 719

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = +1

Query: 211 MDKSNTSGSAEGVIETQNYANSSLNTETLKRQSFPIPYTSVT-----GERRNFKRAANRG 375
           M+K+      EG  E +N A+SS N E+L+     +  TS T     G R+N+KRAANRG
Sbjct: 1   MEKNIAHCPVEGNGEIENGASSSQNPESLEHSV--LLSTSQTMPNNLGIRKNYKRAANRG 58

Query: 376 RKGSRVLPSRTYPLRSSESTVRVLRSRS 459
           +KGS+ L  + Y L SS S VRVLRS S
Sbjct: 59  KKGSQGLTGQAYTLMSSNSDVRVLRSTS 86

>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3 homolog)
          Length = 1084

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 253 ETQNYANSSLNTETLKRQSFPIPYTSVTGERRNFKRAANRGRKGSRVLP-SRTYP 414
           E Q+Y NS ++T T +   +  P++  + +  +FK +++R  K     P S +YP
Sbjct: 55  EAQSYQNSPVSTATNQDAGYGSPFSEGSDQLAHFKSSSSREEKEESQCPDSVSYP 109

>CI055_HUMAN (Q5VZ89) Protein C9orf55|
          Length = 1620

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 328 SVTGERRNFKRAANRGRKGSRVLPSRTYPLRSSESTVRVLRSRSVADKSPS 480
           +V GE  N K+  +RG K  +  P R+    SSES   +L  +S  D + S
Sbjct: 729 AVFGEATNLKKNGDRGEKRQKHFPERSCSF-SSESRAGMLLKKSSLDSNSS 778

>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 283 NTETLKRQSFPIPYTSVTGERRNFKRAANRGRKGSRVLPSRTYPLRSSESTVRVLRSRSV 462
           +T++  R + P P TSV+ ER   + A   GRK S    +     +    T    R R  
Sbjct: 208 STDSASRAALPEPSTSVSPERPPSQTARRYGRKASSPSTTSRRQRKGQRETTGTQRRRKS 267

Query: 463 ADKSPS 480
             +S S
Sbjct: 268 RSRSRS 273

>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 420 PQRIGSTWQHSGAFPSPVSCPFEISPFPRYGCVW 319
           P+    TWQ S + P     P   SP+PRYG  W
Sbjct: 193 PRATPPTWQRSTSMP-----PSRASPWPRYGRRW 221

>EAT5_CAEEL (Q27295) Innexin eat-5|
          Length = 423

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 408 GSTWQHSGAFPSPVSCPFEI 349
           G+ W+HSG FP    C F++
Sbjct: 234 GTDWEHSGNFPRIAMCDFQV 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,532,504
Number of Sequences: 219361
Number of extensions: 1071797
Number of successful extensions: 2133
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)