Clone Information

BLAST Search Result

Clone Name	bastl08a02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1	142	5e-34
2	UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2	140	2e-33
3	UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3	93	4e-19
4	UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1	74	2e-13
5	UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)	74	2e-13
6	UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1	72	8e-13
7	UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1	69	5e-12
8	UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ R...	68	1e-11
9	UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)	68	1e-11
10	ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUM...	58	2e-08
11	ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUM...	58	2e-08
12	ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit ...	40	0.004
13	ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subuni...	39	0.010
14	ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subuni...	39	0.010
15	ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subuni...	39	0.010
16	UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit...	37	0.028
17	ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subuni...	36	0.048
18	RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 h...	35	0.081
19	ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subuni...	34	0.18
20	UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit...	34	0.18
21	RAD31_SCHPO (P79064) DNA damage tolerance protein rad31	34	0.24
22	ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUM...	34	0.24
23	HESA1_ANAVT (P46049) Protein hesA, heterocyst	34	0.24
24	ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUM...	34	0.24
25	HESA2_ANAVT (P46048) Protein hesA, vegetative	33	0.31
26	ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subuni...	33	0.53
27	ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subuni...	32	0.69
28	HESA_ANASP (P18500) Protein hesA	32	0.90
29	RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC ...	32	0.90
30	RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC ...	32	1.2
31	RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC ...	32	1.2
32	RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC ...	32	1.2
33	RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC ...	32	1.2
34	RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC ...	32	1.2
35	RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC ...	31	1.5
36	ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subuni...	31	1.5
37	CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6...	31	2.0
38	YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7...	30	3.4
39	YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7...	30	3.4
40	ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subuni...	30	4.4
41	UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (...	30	4.4
42	UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit...	30	4.4
43	UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit...	30	4.4
44	UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit...	30	4.4
45	CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26...	29	5.8
46	CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)	29	5.8
47	CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)	29	5.8
48	CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)	29	5.8
49	CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25...	29	5.8
50	ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit	29	7.6
51	RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC ...	29	7.6
52	KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor...	29	7.6
53	CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID...	28	9.9

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score =  142 bits (358), Expect = 5e-34
 Identities = 76/93 (81%), Positives = 76/93 (81%)
 Frame = +3

Query: 207 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 386
           MLPRKREIVAGEVEDLQKK                MA RGNEIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 387 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT
Sbjct: 61  KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 93



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +  Q++V+G +   +L  + + + G   LG E  KNL L G+
Sbjct: 445 YDAQISVFGSKLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486

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>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score =  140 bits (352), Expect = 2e-33
 Identities = 75/93 (80%), Positives = 75/93 (80%)
 Frame = +3

Query: 207 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 386
           MLPRKREIVAGEVEDLQKK                MA RGNEIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 387 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           K LFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT
Sbjct: 61  KPLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 93



 Score = 30.0 bits (66), Expect = 3.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +  Q++V+G     +L  + + + G   LG E  KNL L G+
Sbjct: 445 YDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486

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>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 47/52 (90%), Positives = 49/52 (94%)
 Frame = +3

Query: 330 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLGAEIAKNL LAGVKSVT
Sbjct: 45  EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKSVT 96



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +  Q++V+G +  K++  +N  V G   LG E  KNL L GV
Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLALMGV 489

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>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = +3

Query: 312 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

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>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = +3

Query: 312 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

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>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
 Frame = +3

Query: 312 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G+E  IDE L+SRQL V G E MK L  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

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>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 330 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           EIDE L+SRQL V G+E M ++  SNVL+ GL+GLG EIAKN+VLAGVKS+T
Sbjct: 13  EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMT 64

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>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
           protein 3)
          Length = 1012

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = +3

Query: 327 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           N IDE L+SRQL V G E MK++  SNVL+ G +GLG EIAKN+ LAGVKSVT
Sbjct: 13  NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVT 65

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>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 34/51 (66%), Positives = 42/51 (82%)
 Frame = +3

Query: 333 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           +DE+L+SRQL V G   M+R+ G+ VLVSGLQGLGAE+AKNLVL GV S+T
Sbjct: 10  LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGVGSLT 60

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>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 350

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           + RQ+ ++G E  KRL  S VL+ G++GLGAEIAKNL+LAGVK +T
Sbjct: 23  YDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVKGLT 68

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>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 346

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           + RQ+ ++G E  KRL  S VL+ GL+GLGAEIAKNL+LAGVK +T
Sbjct: 19  YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLT 64

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>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = +3

Query: 312 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA++G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T
Sbjct: 1   MAQQGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58

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>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 312 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T
Sbjct: 1   MAQPGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58

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>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
           (Protooncogene protein 1) (HPP1)
          Length = 534

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 312 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T
Sbjct: 1   MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58

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>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 510

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 312 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T
Sbjct: 1   MAQPGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58

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>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme E1 3)
          Length = 444

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 378 ETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           ET+K  F S +L+ G  GLG EI K+L L+G + ++
Sbjct: 37  ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLS 72

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>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 535

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 312 MARRGN-EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           MA+ G   + E  + RQL ++G    + L  ++V V      G EI KNLVL G+ S T
Sbjct: 1   MAQPGRASLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFT 59

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>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)|
          Length = 347

 Score = 35.4 bits (80), Expect = 0.081
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +3

Query: 312 MARRGNEIDED---LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           M  +  ++ ED   L+ RQ+ ++G      +  + VL+  L  +G+EI K++VL+G+  +
Sbjct: 1   MDMKVEKLSEDEIALYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGIGHL 60

Query: 483 T 485
           T
Sbjct: 61  T 61

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>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
          Length = 541

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS 479
           + RQ+ ++G E    +  ++  V G   L  EI K+LVLAGV+S
Sbjct: 10  YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQS 53

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>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3 homolog) (Ectopic
           membrane ruffles in embryo protein 1)
          Length = 430

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 366 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           V G E  + L  + +LV G  GLG E+ KNL L+G +++
Sbjct: 31  VPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTI 69

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>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31|
          Length = 307

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 345 LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           L+ RQ+ ++G    + L  S VL+     L  EIAKNLVL+G+
Sbjct: 13  LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGI 55

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>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 375 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           RE  + + G  VLV G  G+G E+ KNLVL G   +
Sbjct: 9   RELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHI 44

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>HESA1_ANAVT (P46049) Protein hesA, heterocyst|
          Length = 267

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 348 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +SRQ+ +  +G    KRL  + VLV+G+ GLG   A  L +AGV
Sbjct: 12  YSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 55

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>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 375 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           RE  + + G  VLV G  G+G E+ KNLVL G   +
Sbjct: 9   RELAEAVSGGRVLVVGAGGIGCELLKNLVLTGFSHI 44

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>HESA2_ANAVT (P46048) Protein hesA, vegetative|
          Length = 265

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 369 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +G+E  +RL  + VLV+G+ GLG   A  L +AGV
Sbjct: 21  FGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGV 55

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>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 333 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           I E  + RQL ++G    + L  ++V +      G EI KNLVL G+
Sbjct: 7   IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 53

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>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 339 EDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           E  + RQL ++G    + L  ++V +      G EI KNLVL G+ + T
Sbjct: 9   EQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGIGAFT 57

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>HESA_ANASP (P18500) Protein hesA|
          Length = 252

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 369 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 473
           +G    KRL  + VLV+G+ GLG   A  L +AGV
Sbjct: 6   FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 40

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>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1046

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +3

Query: 324 GNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           GNE+ E L+ R L  Y ++++      + LV   + +  +IAK ++ AGV +VT
Sbjct: 766 GNEVIESLYERILGRYAQKSVFEPQTGDKLVGHNEMITEDIAKRIIEAGVTTVT 819

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>RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1203

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V
Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETV 884

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>RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1203

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V
Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETV 884

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>RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1203

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V
Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETV 884

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>RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1203

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V
Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETV 884

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>RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1203

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 482
           + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V
Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETV 884

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>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1054

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 324 GNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           GNE+ E L+ R L  Y ++++        LV+  + +  +IAK ++ AG+ +VT
Sbjct: 766 GNEVIEPLYERILGRYAQKSVFDPETGETLVNHNEMITEDIAKRIIEAGITTVT 819

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>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit|
           (Auxin-resistance protein AXR1)
          Length = 540

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           + RQL ++G      L  +++ +      G+E  KNLVL GV S+T
Sbjct: 24  YDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSIT 69

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>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)|
           (Debrisoquine 4-hydroxylase)
          Length = 497

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -1

Query: 395 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           EAL  LA I   +A   +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

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>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
 Frame = +2

Query: 344 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 445
           P QSPARR W R H+A     P   Q   +W      RD
Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206

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>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
 Frame = +2

Query: 344 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 445
           P QSPARR W R H+A     P   Q   +W      RD
Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206

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>ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1) (E1
           N-terminus-related protein 2)
          Length = 462

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSG-LQGLGAEIAKNLVLAGVKSVT 485
           + RQL ++G      L  S V V G    L  E+ KNLVLAG+ S+T
Sbjct: 4   YDRQLRLWGALGQDSLNRSRVCVVGPATPLLQEVFKNLVLAGISSLT 50

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>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 408 VLVSGLQGLGAEIAKNLVLAGVKSV 482
           VLV G  GLG E+ KNL L+G + +
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQI 96

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>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 408 VLVSGLQGLGAEIAKNLVLAGVKSV 482
           VLV G  GLG E+ KNL L+G + +
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQI 96

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>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 408 VLVSGLQGLGAEIAKNLVLAGVKSV 482
           VLV G  GLG E+ KNL L+G + +
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQI 96

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>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 408 VLVSGLQGLGAEIAKNLVLAGVKSV 482
           VLV G  GLG E+ KNL L+G + +
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQI 96

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>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)|
           (P450-CMF2) (Debrisoquine 4-hydroxylase)
          Length = 500

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -1

Query: 344 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           +LVDLV         + PG +PLPG G LLQV
Sbjct: 21  LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52

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>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)|
          Length = 497

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 389 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           L  L  +   +A   +LVDL+         + PG LPLPG G LL V
Sbjct: 3   LDALVPLAVTVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

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>CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)|
          Length = 497

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = -1

Query: 395 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           EAL  LA I   +    +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

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>CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)|
          Length = 497

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = -1

Query: 395 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           EAL  LA I   +    +LVDL+         + PG LPLPG G LL V
Sbjct: 4   EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49

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>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin|
           D(3) 25-hydroxylase)
          Length = 499

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 344 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           +LVDL+         + PG +PLPG G LLQV
Sbjct: 20  LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51

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>ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit|
          Length = 524

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 348 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           + RQ+ ++G      L  + V +  +  +G E AK LVL G+   T
Sbjct: 18  YDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFT 63

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>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1053

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 318 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 485
           R G EI E L  R    Y R+T++    + ++V     +  +IA  ++ AG++ V+
Sbjct: 830 REGTEIIEPLEERLEGRYARKTIRHPETNEIIVKENDLITEDIAVQIIGAGIEEVS 885

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>KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor BTEB1) (Basic|
           transcription element-binding protein 1) (BTE-binding
           protein 1) (GC box-binding protein 1)
          Length = 244

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 344 PAQSPARRLWPRDHEAPLRLQRPRLWTSGSRCRDRKEPCP-RGC 472
           P+ SP  R  P    +PL L  P +   G    +++  CP  GC
Sbjct: 107 PSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGC 150

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>CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID19) (P450|
           CM2D-1)
          Length = 497

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 389 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 249
           L  L  +   +A   +LVDL+         + PG +PLPG G LL V
Sbjct: 3   LDALVPLAVTVAIFVLLVDLMHRRQRWAARYPPGPMPLPGLGNLLHV 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,812,756
Number of Sequences: 219361
Number of extensions: 986912
Number of successful extensions: 4031
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4028
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result