ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl08a01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475205.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 409 aggcggctgttgcaggaggagaaggggaggctctccgcagctt 451 ||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 230 aggcggcggttgcaggaggtgaaggggaggctcttcgcagctt 272
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 409 aggcggctgttgcaggaggagaaggggaggctctccgcagctt 451 ||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 19616 aggcggcggttgcaggaggtgaaggggaggctcttcgcagctt 19658
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 409 aggcggctgttgcaggaggagaaggggaggctctccgcagctt 451 ||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 137439 aggcggcggttgcaggaggtgaaggggaggctcttcgcagctt 137481
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 409 aggcggctgttgcaggaggagaaggggaggctctccgcagctt 451 ||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 19215541 aggcggcggttgcaggaggtgaaggggaggctcttcgcagctt 19215583 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacg 149 |||||||| ||||||||||||||||| Sbjct: 2545505 cctcctcctcctcgccgccgccgacg 2545530 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gcctcctccccctcgccgccgccg 146 |||||||| ||||||||||||||| Sbjct: 24092339 gcctcctctccctcgccgccgccg 24092316 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 387 gaggagggggttgtggaggcggaggcgg 414 ||||||| || ||||||||||||||||| Sbjct: 19534111 gaggaggcggatgtggaggcggaggcgg 19534084
>dbj|AK102894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112N14, full insert sequence Length = 2886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 409 aggcggctgttgcaggaggagaaggggaggctctccgcagctt 451 ||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 355 aggcggcggttgcaggaggtgaaggggaggctcttcgcagctt 397
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||||||||||||||||||||| Sbjct: 27146508 cgcctcctccccctcgccgccgccg 27146532 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 21414080 cctccccctcgccgccgccg 21414061
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||||||||||||||||||||| Sbjct: 3524 cgcctcctccccctcgccgccgccg 3548
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||||||||||||||||||||| Sbjct: 115318 cgcctcctccccctcgccgccgccg 115342
>ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1361 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtctcc 154 |||||||| |||||||||||||| ||||||| Sbjct: 39 cctcctcctcctcgccgccgccgccgtctcc 69
>ref|NM_186306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 gcctcctccccctcgccgccgccgacg 149 |||||||| |||||||||||||||||| Sbjct: 812 gcctcctcaccctcgccgccgccgacg 786
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccg 146 ||||||||||||||||||||||| Sbjct: 3920 cctcctccccctcgccgccgccg 3942
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccg 146 ||||||||||||||||||||||| Sbjct: 3099481 cctcctccccctcgccgccgccg 3099503 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ggaggcggaggcggctgttgcaggaggag 429 ||||||||||| | ||||||||||||||| Sbjct: 2092252 ggaggcggaggagcctgttgcaggaggag 2092280 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 34239431 cctccccctcgccgccgccg 34239412 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 30991107 cctccccctcgccgccgccg 30991126 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 30264350 cctcctccccctcgccgccg 30264369 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctcgccgccgccgacgtctc 153 |||||||||||||||||||| Sbjct: 22622736 ctcgccgccgccgacgtctc 22622717
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtctcc 154 |||||||| |||||||||||||| ||||||| Sbjct: 18564750 cctcctcctcctcgccgccgccgccgtctcc 18564780 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 gcctcctccccctcgccgccgccgacg 149 |||||||| |||||||||||||||||| Sbjct: 2393873 gcctcctcaccctcgccgccgccgacg 2393847 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgccg 146 ||||||||||||||||||||| Sbjct: 27727982 tcctccccctcgccgccgccg 27727962 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 5631473 cctcctcctcctcgccgccgccgtcgtc 5631446
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtctcc 154 |||||||| |||||||||||||| ||||||| Sbjct: 17292 cctcctcctcctcgccgccgccgccgtctcc 17322
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtctcc 154 |||||||| |||||||||||||| ||||||| Sbjct: 93506 cctcctcctcctcgccgccgccgccgtctcc 93536
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 gcctcctccccctcgccgccgccgacg 149 |||||||| |||||||||||||||||| Sbjct: 96881 gcctcctcaccctcgccgccgccgacg 96855
>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full insert sequence Length = 1361 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtctcc 154 |||||||| |||||||||||||| ||||||| Sbjct: 39 cctcctcctcctcgccgccgccgccgtctcc 69
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccg 146 ||||||||||||||||||||||| Sbjct: 160556 cctcctccccctcgccgccgccg 160578
>ref|XM_483020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccgacgtc 151 |||||||||| |||||||||||||| |||| Sbjct: 40 cgcctcctcctcctcgccgccgccgccgtc 69
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacg 149 |||||||| ||||||||||||||||| Sbjct: 30391 cctcctcctcctcgccgccgccgacg 30416
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccgacgtc 151 |||||||||| |||||||||||||| |||| Sbjct: 23913888 cgcctcctcctcctcgccgccgccgccgtc 23913917 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 5984421 cgcctcctccccgtcgccgccgccg 5984397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 350816 cgcctcctccccgtcgccgccgccg 350840
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccgacgtc 151 |||||||||| |||||||||||||| |||| Sbjct: 105592 cgcctcctcctcctcgccgccgccgccgtc 105621
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccgacgtc 151 |||||||||| |||||||||||||| |||| Sbjct: 47039 cgcctcctcctcctcgccgccgccgccgtc 47068
>ref|XM_556958.1| Anopheles gambiae str. PEST ENSANGP00000028246 (ENSANGG00000018042), partial mRNA Length = 1245 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 359 ggaggtggtggaggaacagcccgccg 384 ||||||| |||||||||||||||||| Sbjct: 1116 ggaggtgctggaggaacagcccgccg 1141 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 329 ggaggtggtggaggaacagcccgccg 354 ||||||| |||||||||||||||||| Sbjct: 1116 ggaggtgctggaggaacagcccgccg 1141
>ref|XM_316322.2| Anopheles gambiae str. PEST ENSANGP00000020531 (ENSANGG00000018042), partial mRNA Length = 5436 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 359 ggaggtggtggaggaacagcccgccg 384 ||||||| |||||||||||||||||| Sbjct: 4218 ggaggtgctggaggaacagcccgccg 4243 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 329 ggaggtggtggaggaacagcccgccg 354 ||||||| |||||||||||||||||| Sbjct: 4218 ggaggtgctggaggaacagcccgccg 4243
>dbj|AK107957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C05, full insert sequence Length = 819 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacg 149 |||||||| ||||||||||||||||| Sbjct: 363 cctcctcctcctcgccgccgccgacg 338
>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence Length = 205642 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 408 gaggcggctgttgcaggaggagaagg 433 ||||||| |||||||||||||||||| Sbjct: 111536 gaggcggttgttgcaggaggagaagg 111561
>ref|XM_479704.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 49 cgcctcctccccgtcgccgccgccg 73
>ref|XM_464924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgc 144 ||||||||||||||||||||| Sbjct: 331 cctcctccccctcgccgccgc 351
>ref|XM_464216.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cccctcgccgccgccgacgtc 151 ||||||||||||||||||||| Sbjct: 45 cccctcgccgccgccgacgtc 25
>ref|NM_185999.2| Oryza sativa (japonica cultivar-group), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgccg 146 ||||||||||||||||||||| Sbjct: 508 tcctccccctcgccgccgccg 488
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccagtgaggaggtggtggaggaaca 346 |||||||||| |||||||||||||| Sbjct: 523079 ccagtgaggaagtggtggaggaaca 523055
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccagtgaggaggtggtggaggaaca 346 |||||||||| |||||||||||||| Sbjct: 174895 ccagtgaggaagtggtggaggaaca 174871
>gb|AC013353.9| Trypanosoma brucei chromosome 6 clone RPCI93-28P18, complete sequence Length = 149023 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccagtgaggaggtggtggaggaaca 346 |||||||||| |||||||||||||| Sbjct: 15539 ccagtgaggaagtggtggaggaaca 15515
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||| ||||||||||||||||| Sbjct: 31856396 cgcctccgccccctcgccgccgccg 31856420 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 30464533 cctccccctcgccgccgccg 30464552 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgccgccgccgacgtctccgt 156 |||||||||||||| ||||||||| Sbjct: 15837737 cctcgccgccgccggcgtctccgt 15837760
>emb|Z81082.1|CEF42G4 Caenorhabditis elegans Cosmid F42G4, complete sequence Length = 35240 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 gagggggttgtggaggcggaggcgg 414 |||||||| |||||||||||||||| Sbjct: 12478 gagggggtggtggaggcggaggcgg 12454
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 cgccgttgaggaggtggtggaggaa 374 ||||||||||||||| ||||||||| Sbjct: 94520 cgccgttgaggaggttgtggaggaa 94496
>tpg|BK000917.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M308, complete sequence Length = 11172 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 ggaggcggaggcggctgttgcaggaggag 429 ||||||||||| | ||||||||||||||| Sbjct: 8780 ggaggcggaggagcctgttgcaggaggag 8752
>gb|AC019193.7| Homo sapiens BAC clone RP11-335L23 from 4, complete sequence Length = 177720 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgc 144 ||||||||||||||||||||| Sbjct: 120165 cctcctccccctcgccgccgc 120145
>ref|NM_064375.2| Caenorhabditis elegans ZYXin family member (zyx-1) (zyx-1) mRNA, complete cds Length = 2383 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 gagggggttgtggaggcggaggcgg 414 |||||||| |||||||||||||||| Sbjct: 286 gagggggtggtggaggcggaggcgg 262
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||| ||||||||||||||||| Sbjct: 31946912 cgcctccgccccctcgccgccgccg 31946936 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 30555955 cctccccctcgccgccgccg 30555974 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgccgccgccgacgtctccgt 156 |||||||||||||| ||||||||| Sbjct: 15832271 cctcgccgccgccggcgtctccgt 15832294
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 gcctcctccccctcgccgccgccga 147 |||||||| |||||||||||||||| Sbjct: 27174341 gcctcctcaccctcgccgccgccga 27174365 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgc 144 ||||||||||||||||||||| Sbjct: 10050562 cctcctccccctcgccgccgc 10050582 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cccctcgccgccgccgacgtc 151 ||||||||||||||||||||| Sbjct: 3459487 cccctcgccgccgccgacgtc 3459467 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctcctccccctcgccgccgc 144 |||||||||||||||||||| Sbjct: 21563078 ctcctccccctcgccgccgc 21563097 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 17563898 cctccccctcgccgccgccg 17563879
>emb|AL731602.3|OSJN00251 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059H15, complete sequence Length = 149181 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ggaggcggaggcggctgttgcaggaggag 429 ||||||||||| | ||||||||||||||| Sbjct: 6880 ggaggcggaggagcctgttgcaggaggag 6908
>gb|AC009452.21| Homo sapiens chromosome 17, clone RP11-4F22, complete sequence Length = 176069 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 gttgaggaggtggtggaggaa 374 ||||||||||||||||||||| Sbjct: 64089 gttgaggaggtggtggaggaa 64109
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgccg 146 ||||||||||||||||||||| Sbjct: 20361 tcctccccctcgccgccgccg 20341
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 171531 cgcctcctccccgtcgccgccgccg 171507
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgccg 146 ||||||||||||||||||||| Sbjct: 107084 tcctccccctcgccgccgccg 107064
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 gcctcctccccctcgccgccgccga 147 |||||||| |||||||||||||||| Sbjct: 70790 gcctcctcaccctcgccgccgccga 70814
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 gcctcctccccctcgccgccgccga 147 |||||||| |||||||||||||||| Sbjct: 25012 gcctcctcaccctcgccgccgccga 25036
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 35233 cgcctcctccccgtcgccgccgccg 35209
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cccctcgccgccgccgacgtc 151 ||||||||||||||||||||| Sbjct: 4282 cccctcgccgccgccgacgtc 4262
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cccctcgccgccgccgacgtc 151 ||||||||||||||||||||| Sbjct: 72310 cccctcgccgccgccgacgtc 72290
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgc 144 ||||||||||||||||||||| Sbjct: 125255 cctcctccccctcgccgccgc 125275
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 60330 cgcctcctccccgtcgccgccgccg 60354
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1114_D06 Length = 107621 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cgcctcctccccctcgccgccgccg 146 |||||||||||| |||||||||||| Sbjct: 77524 cgcctcctccccgtcgccgccgccg 77500
>dbj|AK106362.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B02, full insert sequence Length = 1569 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||| ||||||||||||||||| Sbjct: 85 cgcctccgccccctcgccgccgccg 109
>dbj|AK069789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034O04, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgccg 146 ||||||||||||||||||||| Sbjct: 507 tcctccccctcgccgccgccg 487
>dbj|AK066707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074F23, full insert sequence Length = 1509 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||| ||||||||||||||||| Sbjct: 40 cgcctccgccccctcgccgccgccg 64
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06, complete sequence Length = 126447 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ggaggcggaggcggctgttgcaggaggag 429 ||||||||||| | ||||||||||||||| Sbjct: 108912 ggaggcggaggagcctgttgcaggaggag 108940
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgccg 146 ||||||| ||||||||||||||||| Sbjct: 57649 cgcctccgccccctcgccgccgccg 57673
>ref|XM_466299.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3008 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctcctccccctcgccgccgc 144 |||||||||||||||||||| Sbjct: 77 ctcctccccctcgccgccgc 96
>ref|XM_465806.1| Oryza sativa (japonica cultivar-group), mRNA Length = 589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 90 cctccccctcgccgccgccg 71
>ref|NM_196906.1| Oryza sativa (japonica cultivar-group) putative WD domain containing protein (OSJNBa0071K18.5), mRNA Length = 2350 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 281 tcctccccctcgccgccgcc 262
>ref|NM_196543.1| Oryza sativa (japonica cultivar-group) putative CCR4-associated factor (OSJNBa0053G13.17), mRNA Length = 2955 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 1826 cctcctcctcctcgccgccgccga 1849
>ref|NM_196533.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053G13.7), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 719 cctcctcctcctcgccgccgccga 742
>ref|XM_469736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 808 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 268 cctccccctcgccgccgccg 249
>ref|XM_477056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 361 cctcctcctcctcgccgccgccgtcgtc 334
>ref|XM_473851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2604 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 238 cctccccctcgccgccgccg 219
>ref|XM_470862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgccgccgccgacgtctccgt 156 |||||||||||||| ||||||||| Sbjct: 186 cctcgccgccgccggcgtctccgt 209
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 199616 tcctccccctcgccgccgcc 199597
>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster, partial sequence Length = 24637 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctcgccgccgccgacgtc 151 |||||||||||||||||||| Sbjct: 2172 ccctcgccgccgccgacgtc 2153
>gb|AY023470.1| Oryza sativa microsatellite MRG5795 containing (TCG)X12, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 38 tcctccccctcgccgccgcc 57
>gb|AY022756.1| Oryza sativa microsatellite MRG5081 containing (CCT)X9, closest to marker R3113, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 116 cctcctcctcctcgccgccgccgtcgtc 143
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 123 gcctcctccccctc-gccgccgccgacg 149 |||||||||||||| ||||||||||||| Sbjct: 86887 gcctcctccccctccgccgccgccgacg 86914
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 123 gcctcctccccctc-gccgccgccgacg 149 |||||||||||||| ||||||||||||| Sbjct: 10069 gcctcctccccctccgccgccgccgacg 10096
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgccgccgccgacgtctccgt 156 |||||||||||||| ||||||||| Sbjct: 99537 cctcgccgccgccggcgtctccgt 99560
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 387 gaggagggggttgtggaggcggaggcgg 414 ||||||| || ||||||||||||||||| Sbjct: 134823 gaggaggcggatgtggaggcggaggcgg 134796
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gcctcctccccctcgccgccgccg 146 |||||||| ||||||||||||||| Sbjct: 160828 gcctcctctccctcgccgccgccg 160805
>gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, complete sequence Length = 198294 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctggccagtgaggaggtgg 336 |||||||||||||||||||| Sbjct: 126945 gctggccagtgaggaggtgg 126926
>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051P13, complete sequence Length = 142241 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 136946 tcctccccctcgccgccgcc 136965
>ref|XM_545460.1| PREDICTED: Canis familiaris similar to olfactory receptor Olr1744 (LOC488338), mRNA Length = 939 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 312 gcggtgctggccagtgaggaggtggtggaggaacag 347 |||| ||||||| |||||||||||||| || ||||| Sbjct: 270 gcggcgctggcctgtgaggaggtggtgcagcaacag 235
>ref|XM_569161.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB02340) partial mRNA Length = 3573 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 gggggttgtggaggcggaggcggc 415 |||||||| ||||||||||||||| Sbjct: 1729 gggggttggggaggcggaggcggc 1706
>ref|XM_547212.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 2610003J06 (LOC490091), mRNA Length = 834 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gaggaagagctctgcgccgtggag 200 |||||||||| ||||||||||||| Sbjct: 154 gaggaagagcgctgcgccgtggag 177
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctcgccgccgccgacgtc 151 |||||||||||||||||||| Sbjct: 548265 ccctcgccgccgccgacgtc 548246
>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 21523 tcctccccctcgccgccgcc 21542
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 137465 cctcctccacctcgccgccgccga 137488
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 50067 tcctccccctcgccgccgcc 50048
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgaaccctgcgccgcagccg 257 |||||||||||||||||||| Sbjct: 3389806 cgaaccctgcgccgcagccg 3389787
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctcgccgccgccgacgtctc 153 |||||||||||||||||||| Sbjct: 64836 ctcgccgccgccgacgtctc 64817
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 88480 cctccccctcgccgccgccg 88499
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 150813 cctccccctcgccgccgccg 150794
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 gggggttgtggaggcggaggcggc 415 |||||||| ||||||||||||||| Sbjct: 677790 gggggttggggaggcggaggcggc 677813
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 12482 cctccccctcgccgccgccg 12463
>dbj|AP009046.1| Hyphantria cunea nucleopolyhedrovirus genomic DNA, complete genome Length = 132959 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gccgtcgcccgcgtccgctg 273 |||||||||||||||||||| Sbjct: 96215 gccgtcgcccgcgtccgctg 96196
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 85631 cctccccctcgccgccgccg 85650
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 9179125 cctcctccccctcgccgccg 9179106 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 5070456 cctcctcctcctcgccgccgccgccgtc 5070429
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 26452255 cctcctccacctcgccgccgccga 26452232 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 5476405 tcctccccctcgccgccgcc 5476424 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 123 gcctcctccccctc-gccgccgccgacg 149 |||||||||||||| ||||||||||||| Sbjct: 3492932 gcctcctccccctccgccgccgccgacg 3492959
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 16610175 tcctccccctcgccgccgcc 16610194 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 14362454 cctcctcctcctcgccgccgccga 14362477 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 14289747 cctcctcctcctcgccgccgccga 14289724
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgcc 145 |||||||||| ||||||||||||| Sbjct: 16261289 cgcctcctccgcctcgccgccgcc 16261312 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 14548212 cctcctcctcctcgccgccgccgccgtc 14548185
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 5769114 cctccccctcgccgccgccg 5769133
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 109729 cctcctcctcctcgccgccgccga 109752 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 37022 cctcctcctcctcgccgccgccga 36999
>gb|AE004766.1| Pseudomonas aeruginosa PAO1, section 327 of 529 of the complete genome Length = 14138 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tccccctcgccgccgccgac 148 |||||||||||||||||||| Sbjct: 5981 tccccctcgccgccgccgac 6000
>gb|AC005295.1| Homo sapiens X bins 3-5 PAC RPCI4-617A9 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 131070 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgcaggaggagaaggggagg 438 |||||||||||||||||||| Sbjct: 13556 tgcaggaggagaaggggagg 13537
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctcctccccctcgccgccgc 144 |||||||||||||||||||| Sbjct: 52028 ctcctccccctcgccgccgc 52047
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctcctccccctcgccgccgc 144 |||||||||||||||||||| Sbjct: 158005 ctcctccccctcgccgccgc 158024
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 93816 cctccccctcgccgccgccg 93835
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 46501 cctcctcctcctcgccgccgccgccgtc 46474
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 48580 cctccccctcgccgccgccg 48561
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cgcctcctccccctcgccgccgcc 145 |||||||||| ||||||||||||| Sbjct: 77805 cgcctcctccgcctcgccgccgcc 77828
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 33816 cctccccctcgccgccgccg 33797
>dbj|AK111799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109D12, full insert sequence Length = 3080 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctcgccgccgccgacgtctc 153 |||||||||||||||||||| Sbjct: 45 ctcgccgccgccgacgtctc 64
>dbj|AK106324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E12, full insert sequence Length = 744 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 69 cctcctcctcctcgccgccgccgccgtc 96
>dbj|AK103099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N06, full insert sequence Length = 2358 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 61 cctccccctcgccgccgccg 80
>dbj|AK102821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O14, full insert sequence Length = 1899 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 387 gaggagggggttgtggaggcggaggcgg 414 ||||||| || ||||||||||||||||| Sbjct: 172 gaggaggcggatgtggaggcggaggcgg 145
>dbj|AK102754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106P12, full insert sequence Length = 3009 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctcctccccctcgccgccgc 144 |||||||||||||||||||| Sbjct: 77 ctcctccccctcgccgccgc 96
>dbj|AK101180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029E20, full insert sequence Length = 2834 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 420 cctcctccccctcgccgccg 401
>dbj|AK100672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N09, full insert sequence Length = 3130 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 417 cctccccctcgccgccgccg 398
>dbj|AK099115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C07, full insert sequence Length = 3784 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 123 gcctcctccccct-cgccgccgccgacg 149 ||||||||||||| |||||||||||||| Sbjct: 249 gcctcctccccctccgccgccgccgacg 222
>dbj|AK072303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024H09, full insert sequence Length = 3631 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 140 cctcctccccctcgccgccg 121
>dbj|AK068906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M22, full insert sequence Length = 2514 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 396 tcctccccctcgccgccgcc 377
>dbj|AK067763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K02, full insert sequence Length = 875 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 55 cctccccctcgccgccgccg 74
>gb|AC002992.1|AC002992 Homo sapiens chromosome Y, clone 203M13, complete sequence Length = 154848 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgcaggaggagaaggggagg 438 |||||||||||||||||||| Sbjct: 83331 tgcaggaggagaaggggagg 83350
>dbj|AK064003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G01, full insert sequence Length = 2108 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 37 cctccccctcgccgccgccg 56
>dbj|AK062702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B03, full insert sequence Length = 715 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 cctcgccgccgccgacgtctccgt 156 ||||||||||||||||| |||||| Sbjct: 160 cctcgccgccgccgacgcctccgt 137
>dbj|AK060733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A09, full insert sequence Length = 2400 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 338 cctcctccccctcgccgccg 319
>dbj|AK059542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E12, full insert sequence Length = 589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 90 cctccccctcgccgccgccg 71
>dbj|AK058795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H05, full insert sequence Length = 886 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 366 cctccccctcgccgccgccg 347
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 93165 cctcctcctcctcgccgccgccgtcgtc 93138
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 22070 cctccccctcgccgccgccg 22051
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cctgcgccgcagccgtcgcccgcg 266 ||||||||||||||| |||||||| Sbjct: 283811 cctgcgccgcagccgccgcccgcg 283834
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 16618416 tcctccccctcgccgccgcc 16618435 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 14370696 cctcctcctcctcgccgccgccga 14370719 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 14297989 cctcctcctcctcgccgccgccga 14297966
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccga 147 |||||||| ||||||||||||||| Sbjct: 26777519 cctcctccacctcgccgccgccga 26777496 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcctccccctcgccgccgcc 145 |||||||||||||||||||| Sbjct: 5542882 tcctccccctcgccgccgcc 5542901 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 123 gcctcctccccctc-gccgccgccgacg 149 |||||||||||||| ||||||||||||| Sbjct: 3501636 gcctcctccccctccgccgccgccgacg 3501663
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 9179010 cctcctccccctcgccgccg 9178991 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 5070438 cctcctcctcctcgccgccgccgccgtc 5070411
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 160651 cctcctccccctcgccgccg 160670
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 27720 cctcctccccctcgccgccg 27739
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 14246 cctcctccccctcgccgccg 14265
>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112231 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccgccgacgtc 151 |||||||| |||||||||||||| |||| Sbjct: 41109 cctcctcctcctcgccgccgccgccgtc 41082
>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104533 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cctcctccccctcgccgccg 143 |||||||||||||||||||| Sbjct: 35015 cctcctccccctcgccgccg 34996
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete sequence Length = 179832 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctccccctcgccgccgccg 146 |||||||||||||||||||| Sbjct: 16831 cctccccctcgccgccgccg 16850
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctcgccgccgccgacgtc 151 |||||||||||||||||||| Sbjct: 11525 ccctcgccgccgccgacgtc 11506
>dbj|AB069856.1| Hyphantria cunea nuclear polyhedrosis virus HC-pcna gene for proliferating cell nuclear antigen, complete cds Length = 933 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gccgtcgcccgcgtccgctg 273 |||||||||||||||||||| Sbjct: 705 gccgtcgcccgcgtccgctg 686
>emb|AL645684.16| Mouse DNA sequence from clone RP23-35E7 on chromosome 11, complete sequence Length = 122461 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gctggccagtgaggaggtgg 336 |||||||||||||||||||| Sbjct: 12510 gctggccagtgaggaggtgg 12529 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,431,071 Number of Sequences: 3902068 Number of extensions: 3431071 Number of successful extensions: 121627 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 115165 Number of HSP's gapped (non-prelim): 6648 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
