>SLD3_YEAST (P53135) DNA replication regulator SLD3|
          Length = 668

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 154 DPYGPGFFFRWRFTYI*TYRMPRGRGSSVSTQEKPNA 264
           + YGPGF+ +W + Y   Y +P  R   V+T E+  A
Sbjct: 63  EEYGPGFWVKWPYNYFNGYSLPERRTEVVTTVERERA 99

>CORO7_MOUSE (Q9D2V7) Coronin-7 (70 kDa WD repeat tumor rejection antigen|
           homolog)
          Length = 922

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 209 TECLEGEVRLCQPKRSLMLMQQSILTNITAGIRGALICCWGCLYFSFMD 355
           T C +G VR+ +P+ S + +Q+        G R   +C  GCL  S  D
Sbjct: 651 TVCKDGHVRVYEPRSSPLPLQEGPGPEGGRGARIVWVCDGGCLLVSGFD 699

>ADA2B_BOVIN (O77700) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 392

 Score = 24.3 bits (51), Expect(2) = 3.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 248 KRSLMLMQQSILTNITAGIRGALICCWGCLYFSF 349
           +R   L ++   T + A + G  + CW   +FS+
Sbjct: 342 RRRTQLSREKRFTFVLAVVIGVFVLCWFPFFFSY 375



 Score = 23.9 bits (50), Expect(2) = 3.2
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 15  CCLPTRKQRGDRNPNGLPPHPLPFQTAGVHAEPASLCSSPRRRP 146
           C     ++  +    G  P  LP       A PAS CS P ++P
Sbjct: 278 CGSSPEEEAEEEEEEGCEPQALP-------ASPASACSPPLQQP 314

>ESR2_BOVIN (Q9XSB5) Estrogen receptor beta (ER-beta)|
          Length = 527

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 39  RGDRNPNGLPPHPLPFQTAGVHAEPASLCSSPRRRPLWRSVRA 167
           R   +PN L P P       +H +P+ L + P++ P WR  R+
Sbjct: 68  RQTTSPNVLWPTPGHLSPLAIHCQPSVLYAEPQKSP-WRETRS 109

>ZAR1_FUGRU (Q7T3T9) Zygote arrest 1 (Oocyte-specific maternal effect factor)|
          Length = 320

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 224 PRGILYV*M*VKRQRKKNPGPYGSP 150
           PR +L V   ++R+RK NPGP G+P
Sbjct: 97  PRTLLVVKRELRRRRKLNPGPPGTP 121

>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 12  CCCLPTRKQRGDRNPNGLPPHPLPFQ--TAGVHAEPASLCSSPRRRPL 149
           C C P  ++R   + +  PP P P +   AGV    AS CS+P   PL
Sbjct: 174 CGCPPAVEERSSEDGSPAPPAPCPRKRGAAGVGGGRAS-CSAPGSTPL 220

>FOXJ2_MOUSE (Q9ES18) Forkhead box protein J2 (Fork head homologous X)|
          Length = 565

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
 Frame = +3

Query: 15  CCLPTRKQRGDRN---PNGLPPHPLPFQTAGVHAEPASLCSSPRRRP 146
           C  P  KQ G      P G+  HP P Q  G H       S P ++P
Sbjct: 337 CTTPGGKQAGAEGYGPPTGMAMHPPPLQHGGYHPHQHHPHSHPAQQP 383

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 21/80 (26%), Positives = 29/80 (36%)
 Frame = +3

Query: 18  CLPTRKQRGDRNPNGLPPHPLPFQTAGVHAEPASLCSSPRRRPLWRSVRAWILLPLAFHL 197
           C PTR     R P  + PH                      +P  R + A +LLP   H 
Sbjct: 104 CAPTRTYAHTRAPTHVHPH----------------------KPRPRQLSAALLLPTPLHF 141

Query: 198 HLNIQNASRARFVCVNPREA 257
             ++ N S  + V  +P EA
Sbjct: 142 PEDLANVSAPQVVVFDPSEA 161

>ADA2B_TALEU (O19091) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 397

 Score = 24.6 bits (52), Expect(2) = 6.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 248 KRSLMLMQQSILTNITAGIRGALICCWGCLYFSFMDPGLFTVCSLQ 385
           +R   L ++   T + A + G  + CW   +FS+    L  +C  Q
Sbjct: 347 RRRTQLSREKRFTFVLAVVIGVFVLCWFPFFFSY---SLGAICPQQ 389



 Score = 22.3 bits (46), Expect(2) = 6.8
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +3

Query: 18  CLPTRKQRGDRNPNGLPPHPLPFQTAGVHAEPASLCSSPRRRPLWRSVRA 167
           C  + ++  +    G        +   + A PAS CS P ++P    V A
Sbjct: 277 CEASLEEEAEEEEEGEEEREEECEPQALPASPASACSPPLQQPQGSQVLA 326

>AT10D_HUMAN (Q9P241) Probable phospholipid-transporting ATPase VD (EC 3.6.3.1)|
           (ATPVD)
          Length = 1426

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 15/76 (19%)
 Frame = +3

Query: 15  CCLPTRKQRGDR-----NPNGLPPHPL----------PFQTAGVHAEPASLCSSPRRRPL 149
           CC  T KQ GD          LP  PL          P + A V+A  A  C+   R P 
Sbjct: 691 CCTETEKQHGDAGLLNGKAESLPGQPLACNLCYEAESPDEAALVYAARAYQCTLRSRTPE 750

Query: 150 WRSVRAWILLPLAFHL 197
              V    L PL F L
Sbjct: 751 QVMVDFAALGPLTFQL 766

>HES3_MOUSE (Q61657) Transcription factor HES-3 (Hairy and enhancer of split 3)|
          Length = 175

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +3

Query: 24  PTRKQRGDRNPNGLPPHP---LPFQTAGVHAEPASLCSSPRRRPLWRSVRAW 170
           P+R   G  +P    P P   L   T  V  +PAS C +   RP +R  R W
Sbjct: 124 PSRAAGGSHSPQSPLPLPGGLLESSTDVVAPQPASNCQAESTRPGFRVWRPW 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,164,921
Number of Sequences: 219361
Number of extensions: 1132710
Number of successful extensions: 3507
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3502
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)