ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481458.1| Oryza sativa (japonica cultivar-group), mRNA 147 4e-32
2gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
3gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
5dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
6dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
7dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
8emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2... 44 0.40
9emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in... 44 0.40
10gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 44 0.40
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
12dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
13dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
14dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
15dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
16dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
17dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in... 44 0.40
19gb|AC131105.4| Mus musculus BAC clone RP23-280N9 from chromosome... 42 1.6
20gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome... 42 1.6
21emb|AJ250842.1|DBI250842 Dunaliella bioculata mRNA for plastidic... 42 1.6
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Can... 42 1.6
25dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chr... 42 1.6
27ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1),... 40 6.3
28gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.3
29gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (... 40 6.3
30gb|BC026108.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 6.3
31gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, comp... 40 6.3
32ref|XM_446803.1| Candida glabrata CBS138, CAGL0G10175g partial mRNA 40 6.3
33gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosom... 40 6.3
34ref|XM_762080.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 6.3
35ref|XM_661262.1| Cryptosporidium hominis TU502 CG13900 gene prod... 40 6.3
36emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 o... 40 6.3
37gb|BC066968.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 6.3
38emb|AL591662.6| Human DNA sequence from clone RP11-28P17 on chro... 40 6.3
39gb|AC098652.2| Homo sapiens chromosome 1 clone RP11-24D16, compl... 40 6.3
40emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chrom... 40 6.3
41emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase... 40 6.3
42emb|X13520.1|RCHUPLS Rhodobacter capsulatus ORFX and hupL and hu... 40 6.3
43emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 6.3
44gb|BC045713.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 6.3
45ref|XM_687218.1| PREDICTED: Danio rerio similar to LOC553425 pro... 40 6.3
46gb|AC092813.2| Homo sapiens chromosome 1 clone RP11-550H2, compl... 40 6.3
47ref|XM_627314.1| Cryptosporidium parvum Iowa II possible spliceo... 40 6.3
48gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, compl... 40 6.3
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
50gb|AF253978.1|AF253978 Homo sapiens BAT2-iso mRNA, partial cds 40 6.3
51gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, com... 40 6.3
52gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2... 40 6.3
53dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
54dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
55dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
56emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, whi... 40 6.3
57emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on ch... 40 6.3
58gb|BC058930.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 6.3
59gb|BC001260.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA... 40 6.3
60emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chr... 40 6.3
61gb|M37261.1|RCAHUPGA R.capsulatus hydrogenase gene, complete cds 40 6.3 
>ref|XM_481458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3030

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 90  gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 149

                                                                       
Query: 282 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 150 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 209

                                         
Query: 342 gtggcagttgcactacaaaagaatcgagga 371
           |||||||||||||||||||||||| |||||
Sbjct: 210 gtggcagttgcactacaaaagaattgagga 239



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 421 aagaacaatgccaacccagatcgaatcaagag 452
           |||||||||||||| || ||||| ||||||||
Sbjct: 268 aagaacaatgccaatcctgatcggatcaagag 299
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                         
Query: 222   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 16775 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 16834

                                                                         
Query: 282   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 16835 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 16894

                                           
Query: 342   gtggcagttgcactacaaaagaatcgagga 371
             |||||||||||||||||||||||| |||||
Sbjct: 16895 gtggcagttgcactacaaaagaattgagga 16924



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 421   aagaacaatgccaacccagatcgaatcaagag 452
             |||||||||||||| || ||||| ||||||||
Sbjct: 16953 aagaacaatgccaatcctgatcggatcaagag 16984
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 222   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 60160 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 60101

                                                                         
Query: 282   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 60100 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 60041

                                           
Query: 342   gtggcagttgcactacaaaagaatcgagga 371
             |||||||||||||||||||||||| |||||
Sbjct: 60040 gtggcagttgcactacaaaagaattgagga 60011



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 421   aagaacaatgccaacccagatcgaatcaagag 452
             |||||||||||||| || ||||| ||||||||
Sbjct: 59982 aagaacaatgccaatcctgatcggatcaagag 59951
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                            
Query: 222      gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
                |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 12722981 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 12722922

                                                                            
Query: 282      tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
                ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 12722921 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 12722862

                                              
Query: 342      gtggcagttgcactacaaaagaatcgagga 371
                |||||||||||||||||||||||| |||||
Sbjct: 12722861 gtggcagttgcactacaaaagaattgagga 12722832



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 22       ttcccctctccttctctcgctc 43
                ||||||||||||||||||||||
Sbjct: 26425795 ttcccctctccttctctcgctc 26425774



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 13       tccccaaaattcccctctccttctct 38
                ||||||||||||| ||||||||||||
Sbjct: 22749105 tccccaaaattcctctctccttctct 22749130



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 421      aagaacaatgccaacccagatcgaatcaagag 452
                |||||||||||||| || ||||| ||||||||
Sbjct: 12722803 aagaacaatgccaatcctgatcggatcaagag 12722772



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 405     tgcatctcagaatggtaaga 424
               ||||||||||||||||||||
Sbjct: 1665673 tgcatctcagaatggtaaga 1665654
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>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 222   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 66976 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 66917

                                                                         
Query: 282   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 66916 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 66857

                                           
Query: 342   gtggcagttgcactacaaaagaatcgagga 371
             |||||||||||||||||||||||| |||||
Sbjct: 66856 gtggcagttgcactacaaaagaattgagga 66827



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 421   aagaacaatgccaacccagatcgaatcaagag 452
             |||||||||||||| || ||||| ||||||||
Sbjct: 66798 aagaacaatgccaatcctgatcggatcaagag 66767
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>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                          
Query: 222    gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
              |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 108950 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 108891

                                                                          
Query: 282    tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
              ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 108890 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 108831

                                            
Query: 342    gtggcagttgcactacaaaagaatcgagga 371
              |||||||||||||||||||||||| |||||
Sbjct: 108830 gtggcagttgcactacaaaagaattgagga 108801



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 421    aagaacaatgccaacccagatcgaatcaagag 452
              |||||||||||||| || ||||| ||||||||
Sbjct: 108772 aagaacaatgccaatcctgatcggatcaagag 108741
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>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
           insert sequence
          Length = 4003

 Score =  147 bits (74), Expect = 4e-32
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 281
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 426 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 485

                                                                       
Query: 282 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 341
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 486 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 545

                                         
Query: 342 gtggcagttgcactacaaaagaatcgagga 371
           |||||||||||||||||||||||| |||||
Sbjct: 546 gtggcagttgcactacaaaagaattgagga 575



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 421 aagaacaatgccaacccagatcgaatcaagag 452
           |||||||||||||| || ||||| ||||||||
Sbjct: 604 aagaacaatgccaatcctgatcggatcaagag 635
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>emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2 on chromosome 22 Contains
            an STSs and GSSs, complete sequence
          Length = 39004

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 407  catctcagaatggtaagaacaatgcc 432
            ||||||||||||| ||||||||||||
Sbjct: 3594 catctcagaatgggaagaacaatgcc 3569
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>emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in linkage group 18,
             complete sequence
          Length = 27796

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 240   cccatcagatcccaacatatgg 261
             ||||||||||||||||||||||
Sbjct: 10249 cccatcagatcccaacatatgg 10228
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>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 407  catctcagaatggtaagaacaatgcc 432
            ||||||||||||| ||||||||||||
Sbjct: 6877 catctcagaatgggaagaacaatgcc 6852
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 22       ttcccctctccttctctcgctc 43
                ||||||||||||||||||||||
Sbjct: 30397006 ttcccctctccttctctcgctc 30396985
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>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435H01
          Length = 160141

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    ttcccctctccttctctcgctc 43
             ||||||||||||||||||||||
Sbjct: 25269 ttcccctctccttctctcgctc 25248
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>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456A01
          Length = 143710

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    ttcccctctccttctctcgctc 43
             ||||||||||||||||||||||
Sbjct: 82733 ttcccctctccttctctcgctc 82712
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    ttcccctctccttctctcgctc 43
             ||||||||||||||||||||||
Sbjct: 75347 ttcccctctccttctctcgctc 75326
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 22     ttcccctctccttctctcgctc 43
              ||||||||||||||||||||||
Sbjct: 155376 ttcccctctccttctctcgctc 155355
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>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1116H04
          Length = 140142

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 13    tccccaaaattcccctctccttctct 38
             ||||||||||||| ||||||||||||
Sbjct: 75747 tccccaaaattcctctctccttctct 75772
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>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1111C03
          Length = 144879

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 13     tccccaaaattcccctctccttctct 38
              ||||||||||||| ||||||||||||
Sbjct: 117899 tccccaaaattcctctctccttctct 117924
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>emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in linkage group 18,
             complete sequence
          Length = 197774

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 240   cccatcagatcccaacatatgg 261
             ||||||||||||||||||||||
Sbjct: 19672 cccatcagatcccaacatatgg 19693
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>gb|AC131105.4| Mus musculus BAC clone RP23-280N9 from chromosome 19, complete sequence
          Length = 225527

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      cctctcttcccctccccaaaa 21
              |||||||||||||||||||||
Sbjct: 169742 cctctcttcccctccccaaaa 169762
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>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete
            sequence
          Length = 237854

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    cctctcttcccctccccaaaa 21
            |||||||||||||||||||||
Sbjct: 2894 cctctcttcccctccccaaaa 2914
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>emb|AJ250842.1|DBI250842 Dunaliella bioculata mRNA for plastidic NADP-dependent malate
           dehydrogenase (nadp-MDH gene)
          Length = 1619

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 390 ttctgcaggttcagctgcatc 410
           |||||||||||||||||||||
Sbjct: 42  ttctgcaggttcagctgcatc 22
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 163      cgggacctcgtgcagcgcctc 183
                |||||||||||||||||||||
Sbjct: 24460746 cgggacctcgtgcagcgcctc 24460726
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0012B02
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   cgggacctcgtgcagcgcctc 183
             |||||||||||||||||||||
Sbjct: 72219 cgggacctcgtgcagcgcctc 72199
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>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 408   atctcagaatggtaagaacaatgcc 432
             ||||||||||||||||||| |||||
Sbjct: 10178 atctcagaatggtaagaacgatgcc 10202
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>dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F03, full
           insert sequence
          Length = 915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 163 cgggacctcgtgcagcgcctc 183
           |||||||||||||||||||||
Sbjct: 346 cgggacctcgtgcagcgcctc 366
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>emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chromosome 2, complete
             sequence
          Length = 150222

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     cttcccctccccaaaattccc 26
             |||||||||||||||||||||
Sbjct: 49345 cttcccctccccaaaattccc 49365
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>ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1), mRNA
          Length = 10383

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1860 ccctctccttctctcgctcc 1841
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     tctgcaggttcagctgcatc 410
               ||||||||||||||||||||
Sbjct: 2233033 tctgcaggttcagctgcatc 2233014
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>gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone
           MGC:77239 IMAGE:6963267), complete cds
          Length = 2782

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ccctctccttctctcgctcc 44
           ||||||||||||||||||||
Sbjct: 831 ccctctccttctctcgctcc 812
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>gb|BC026108.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4794617)
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1837 ccctctccttctctcgctcc 1818
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>gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, complete sequence
          Length = 134922

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    tgcaggtgatggtactgatgttca 112
             ||||||||| ||||||||||||||
Sbjct: 20687 tgcaggtgaaggtactgatgttca 20664
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>ref|XM_446803.1| Candida glabrata CBS138, CAGL0G10175g partial mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 393  tgcaggttcagctgcatctcagaatggt 420
            |||||||||||||||||||  |||||||
Sbjct: 1653 tgcaggttcagctgcatctttgaatggt 1680
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>gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosome 19, complete
             sequence
          Length = 187534

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   gtgagaactttgagaaaatg 291
             ||||||||||||||||||||
Sbjct: 44175 gtgagaactttgagaaaatg 44194
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>ref|XM_762080.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_17_617_10144)
            partial mRNA
          Length = 9528

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gagaagtcagcacagtccaa 236
            ||||||||||||||||||||
Sbjct: 9161 gagaagtcagcacagtccaa 9180
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>ref|XM_661262.1| Cryptosporidium hominis TU502 CG13900 gene product (Chro.80487)
            partial mRNA
          Length = 3957

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  gaactttgagaaaatgattc 295
            ||||||||||||||||||||
Sbjct: 2378 gaactttgagaaaatgattc 2359
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>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3
             Contains part of the gene for HBxAg transactivated protein
             2 (XTP2), complete sequence
          Length = 99886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ccctctccttctctcgctcc 44
             ||||||||||||||||||||
Sbjct: 42935 ccctctccttctctcgctcc 42916
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>gb|BC066968.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:5260574)
          Length = 1987

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1881 ccctctccttctctcgctcc 1862
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>emb|AL591662.6| Human DNA sequence from clone RP11-28P17 on chromosome 9 Contains part
             of the TMC1 gene for transmembrane cochlear-expressed 1, a
             ribosomal protein S20 (RPS20) pseudogene and a ribosomal
             protein S27a (RPS27A) pseudogene, complete sequence
          Length = 170815

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   tgagaactttgagaaaatga 292
             ||||||||||||||||||||
Sbjct: 37345 tgagaactttgagaaaatga 37326
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>gb|AC098652.2| Homo sapiens chromosome 1 clone RP11-24D16, complete sequence
          Length = 156393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  tcagaatggtaagaacaatg 430
            ||||||||||||||||||||
Sbjct: 9073 tcagaatggtaagaacaatg 9092
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>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32
             Contains part of a novel gene, the OGN gene for
             osteoglycin (osteoinductive factor, mimecan), the OMD gene
             for osteomodulin, the ASPN gene for asporin (LRR class 1)
             and the 3' end of the ECM2 gene for extracellular matrix
             protein 2 (female organ and adipocyte specific), complete
             sequence
          Length = 152341

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cctctcttcccctccccaaa 20
             ||||||||||||||||||||
Sbjct: 90031 cctctcttcccctccccaaa 90012
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>emb|Y14197.2|RSY14197 Rhodobacter sphaeroides uptake hydrogenase operon
          Length = 11280

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  tctgcaggttcagctgcatc 410
            ||||||||||||||||||||
Sbjct: 8421 tctgcaggttcagctgcatc 8402
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>emb|X13520.1|RCHUPLS Rhodobacter capsulatus ORFX and hupL and hupS genes for hydrogenase
            large and small subunits
          Length = 4175

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  tctgcaggttcagctgcatc 410
            ||||||||||||||||||||
Sbjct: 1912 tctgcaggttcagctgcatc 1893
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 393    tgcaggttcagctgcatctcagaatggt 420
              |||||||||||||||||||  |||||||
Sbjct: 979135 tgcaggttcagctgcatctttgaatggt 979162
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>gb|BC045713.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4794601), complete cds
          Length = 1936

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1832 ccctctccttctctcgctcc 1813
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>ref|XM_687218.1| PREDICTED: Danio rerio similar to LOC553425 protein (LOC563852),
           partial mRNA
          Length = 1435

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ccctctccttctctcgctcc 44
           ||||||||||||||||||||
Sbjct: 571 ccctctccttctctcgctcc 552
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>gb|AC092813.2| Homo sapiens chromosome 1 clone RP11-550H2, complete sequence
          Length = 182529

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   ccaacatatggcttcagatg 270
             ||||||||||||||||||||
Sbjct: 88599 ccaacatatggcttcagatg 88580
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>ref|XM_627314.1| Cryptosporidium parvum Iowa II possible spliceosome factor
            (cgd8_4240), partial mRNA
          Length = 3954

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  gaactttgagaaaatgattc 295
            ||||||||||||||||||||
Sbjct: 2378 gaactttgagaaaatgattc 2359
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>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence
          Length = 198279

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   tcagaatggtaagaacaatg 430
             ||||||||||||||||||||
Sbjct: 22142 tcagaatggtaagaacaatg 22123
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 23       tcccctctccttctctcgctccag 46
                ||||||||||||||||| ||||||
Sbjct: 18567371 tcccctctccttctctctctccag 18567348
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>gb|AF253978.1|AF253978 Homo sapiens BAT2-iso mRNA, partial cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1665 ccctctccttctctcgctcc 1646
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>gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, complete sequence
          Length = 207345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    tgcaggtgatggtactgatgttca 112
             ||||||||| ||||||||||||||
Sbjct: 94006 tgcaggtgaaggtactgatgttca 94029
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>gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2) mRNA, complete cds
          Length = 8106

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1594 ccctctccttctctcgctcc 1575
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    tcccctctccttctctcgctccag 46
             ||||||||||||||||| ||||||
Sbjct: 19913 tcccctctccttctctctctccag 19890
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    tcccctctccttctctcgctccag 46
             ||||||||||||||||| ||||||
Sbjct: 96127 tcccctctccttctctctctccag 96104
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>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0582D05
          Length = 150483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   tgcatctcagaatggtaaga 424
             ||||||||||||||||||||
Sbjct: 65173 tgcatctcagaatggtaaga 65154
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>emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, which has similarities to BAT2
            genes
          Length = 10174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1651 ccctctccttctctcgctcc 1632
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>emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on chromosome 16, complete
             sequence
          Length = 136128

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   gtgagaactttgagaaaatg 291
             ||||||||||||||||||||
Sbjct: 99195 gtgagaactttgagaaaatg 99214
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>gb|BC058930.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:4998749), partial cds
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1843 ccctctccttctctcgctcc 1824
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>gb|BC001260.1| Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
            IMAGE:3460804)
          Length = 1962

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccctctccttctctcgctcc 44
            ||||||||||||||||||||
Sbjct: 1831 ccctctccttctctcgctcc 1812
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>emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chromosome 2, complete
              sequence
          Length = 215139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 6      cttcccctccccaaaattcccctctccttctc 37
              ||||||||||||||| | | ||||||||||||
Sbjct: 109955 cttcccctccccaaagtccacctctccttctc 109986
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>gb|M37261.1|RCAHUPGA R.capsulatus hydrogenase gene, complete cds
          Length = 3018

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  tctgcaggttcagctgcatc 410
            ||||||||||||||||||||
Sbjct: 1423 tctgcaggttcagctgcatc 1404


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,150,885
Number of Sequences: 3902068
Number of extensions: 4150885
Number of successful extensions: 89374
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89067
Number of HSP's gapped (non-prelim): 307
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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