ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07h01 |
|---|---|
| Clone Library Name | barley_pub |
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/67 (29%), Positives = 27/67 (40%) Frame = -1 Query: 333 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRS 154 H CF DPS T +H PPP + AP SP + R P +R+ Sbjct: 3597 HSACFPDPST-ASTSQSAAHSNDSPPP--------PSAAPSSSASPHASRKSWPPVGSRA 3647 Query: 153 HSLRGPS 133 + + PS Sbjct: 3648 SAAKPPS 3654
>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)| Length = 572 Score = 32.7 bits (73), Expect = 0.41 Identities = 22/71 (30%), Positives = 29/71 (40%) Frame = -1 Query: 426 GCPIGSEVPPENRGALGRPTVNQVAVGRLEIHCLCFADPSR*PETQDRQSHHMQLPPPRH 247 G P GS P + LG P G + +A P Q++Q +PPP Sbjct: 283 GAPGGSGSQPNQK--LGHPEALSAGTGSPQPPSFTYAQQREKPRVQEKQH---PVPPPAQ 337 Query: 246 NVDLPRSTGAP 214 N + RS GAP Sbjct: 338 NQNQVRSPGAP 348
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = -1 Query: 333 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRS 154 H CF DPS T +H PP P S AP SP + R P +R+ Sbjct: 3574 HSACFPDPST-ASTSQSAAHSNDSPP-------PPSAAAPSSA-SPHASRKSWPQVVSRA 3624 Query: 153 HSLRGPS 133 + + PS Sbjct: 3625 SAAKPPS 3631
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 203 IRRDPAEIDXXXXXXXXXASGVRAATSRASKCSGEAPQEEAEPTTVTAVRSEPA 42 ++RDPAE+ A +RA + + EA EA P VR+EPA Sbjct: 95 VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 203 IRRDPAEIDXXXXXXXXXASGVRAATSRASKCSGEAPQEEAEPTTVTAVRSEPA 42 ++RDPAE+ A +RA + + EA EA P VR+EPA Sbjct: 95 VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136
>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 539 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 249 HNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGP 136 H++ L R G G H P +GR P+A N +H + P Sbjct: 62 HSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHRPQNP 99
>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 753 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Frame = -1 Query: 297 ETQDRQSHHMQ------LPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGP 136 +TQ + S H Q LPP + + P+ P + PSA + +S RGP Sbjct: 422 QTQQQSSRHHQSQPYQSLPPQKSSQPHPQQIPEAAPVQQPSQQPPQEPSAHQQQYSSRGP 481 Query: 135 SSH 127 H Sbjct: 482 QQH 484
>PTHB1_MOUSE (Q811G0) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein homolog) Length = 885 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -2 Query: 335 STVCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAA 207 + V + P D I +V C F LP+ ++ PG P + A+ Sbjct: 502 NAVVSYSRPTDRNPDGIPRVVQCKFRLPLKLICLPGQPSKTAS 544
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 11/79 (13%) Frame = -2 Query: 230 GPPERPAAGIRR-----------DPAEIDXXXXXXXXXASGVRAATSRASKCSGEAPQEE 84 GP PA G RR +P D G R C ++ Sbjct: 2172 GPEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDS 2231 Query: 83 AEPTTVTAVRSEPARKGGR 27 EPT + +PA KG R Sbjct: 2232 LEPTEGSGAGGDPAAKGER 2250
>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 30.4 bits (67), Expect = 2.0 Identities = 26/99 (26%), Positives = 40/99 (40%) Frame = -1 Query: 420 PIGSEVPPENRGALGRPTVNQVAVGRLEIHCLCFADPSR*PETQDRQSHHMQLPPPRHNV 241 P+ PP A+ +PT+ + P E ++Q+ H + PP +V Sbjct: 1225 PLLPRRPPPRVPAIKKPTLRRTG------------KPLSPEEQFEQQTVHFTIGPPETSV 1272 Query: 240 DLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSHE 124 + P APR P+ R +P A S R P+S E Sbjct: 1273 EAPPVVTAPRVPPVPKP-RTFQPGKAAERPSHRKPASDE 1310
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = +3 Query: 102 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQ 242 SG F+GP S G G R G D G +S R G GAG+ Sbjct: 282 SGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGE 328
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%) Frame = -1 Query: 261 PPPRHNVDLPRSTG----APRG----GHSPRSGRDRRPSAANRSHSLRGPSSHEPGQQ 112 PPPR PR AP G +P + DRR AA R S R P++ PG+Q Sbjct: 283 PPPRRTPGTPRPAAARARAPAGCSPARRTPSAPTDRRCRAARRG-SPRPPAARPPGRQ 339
>IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffuse early| antigen) Length = 438 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = -1 Query: 294 TQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHS 148 T + LPP PR+ PR SPR+ R R + RS S Sbjct: 96 TDESYGKRRHLPPGARAPRAPRAPRVPRAPRSPRAPRSNRATRGPRSES 144
>PTHB1_HUMAN (Q3SYG4) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein) (Bardet-Biedl syndrome 9 protein) Length = 887 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -2 Query: 335 STVCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAA 207 + V + P D I +V C F LP+ ++ PG P + A+ Sbjct: 503 NAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQPSKTAS 545
>ENGA_BORPE (Q7VWL4) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 333 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 196 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>ENGA_BORPA (Q7W6Q0) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 333 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 196 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>ENGA_BORBR (Q7WHN4) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 333 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 196 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 7) Length = 549 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/96 (26%), Positives = 38/96 (39%) Frame = -2 Query: 317 QTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAAGIRRDPAEIDXXXXXXXXXASGV 138 ++P D +H + + P+ L PG ERP + P+ SGV Sbjct: 401 RSPGHDPEHVEVRRQSSD---PLFQLPPPGRGERPPGATGQPPS-----------APSGV 446 Query: 137 RAATSRASKCSGEAPQEEAEPTTVTAVRSEPARKGG 30 + T + Q EA+ +RS+PAR GG Sbjct: 447 K--TQVRAMAPSLTSQAEAQAANQALIRSDPARGGG 480
>TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Protein NYD-SP30)| Length = 887 Score = 29.6 bits (65), Expect = 3.5 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 14/65 (21%) Frame = -1 Query: 279 SHHMQLPPP---RHNVDLPRSTGAPRGGHSPRSGRDR-----------RPSAANRSHSLR 142 +H+ + P R +V PRS A SP SG R RP++A+RSHSL Sbjct: 587 NHYKLIQQPSSIRRSVSCPRSISA----QSPSSGDTRPFSAQQMISVSRPTSASRSHSLN 642 Query: 141 GPSSH 127 SS+ Sbjct: 643 RASSY 647
>Y525_PSEAE (Q51484) Hypothetical protein PA0525| Length = 612 Score = 26.2 bits (56), Expect(2) = 3.5 Identities = 24/71 (33%), Positives = 32/71 (45%) Frame = +2 Query: 17 ATFISPLSLPARSGRR*RWWALPLLEALLRSICWPGSWLLGPRRLWERLAAEGRRSRPDL 196 A PL A+ +R WA LL+A +P L PR + RL A R RP L Sbjct: 117 AASAGPLRHWAQDNQR---WARQLLDA------YPA---LRPR--YARLVAAHLRQRPSL 162 Query: 197 GECPPRGAPVD 229 +CP A ++ Sbjct: 163 DDCPAADAELE 173 Score = 21.9 bits (45), Expect(2) = 3.5 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 Query: 222 RWTGAGQHYDGEEEAA 269 RWT + DGEE AA Sbjct: 208 RWTPSASAEDGEEAAA 223
>TM16B_HUMAN (Q9NQ90) Transmembrane protein 16B| Length = 999 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 9/51 (17%) Frame = -1 Query: 240 DLPRSTGAPR---------GGHSPRSGRDRRPSAANRSHSLRGPSSHEPGQ 115 D+P G+PR GG P+ G+ R+ L+G S+ +PGQ Sbjct: 4 DIPLLPGSPRRLSPQAGSRGGQGPKHGQQCLKMPGPRAPGLQGGSNRDPGQ 54
>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)| Length = 388 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -1 Query: 231 RSTGAPRGGH---SPRSGRDRRPSAANRSHSLRGP 136 R+ G RGGH PR G DRR A H +R P Sbjct: 95 RAAGLGRGGHRRPGPRRGVDRRRRPAAGKHPVRRP 129
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -2 Query: 227 PPERPAAGIRRDPAEIDXXXXXXXXXASGVRAATSRASKC--SGEAPQEEAEPTTVTAVR 54 PP A +P++ + A+G A ++ C +G AP+EEA P ++ Sbjct: 250 PPASEEAKAVEEPSKAEEKAEEAGVSAAGCEAPSAAGPGCPRAGGAPREEAAPPRASSAC 309 Query: 53 SEPARK 36 S P+++ Sbjct: 310 SAPSQE 315
>HBP1_MOUSE (Q8R316) HMG box-containing protein 1 (HMG box transcription factor| 1) (High mobility group box transcription factor 1) Length = 516 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 320 KHKQWISSLPTATWLTVGLPRAPRFSGGTSLPMGHP 427 K+K W S P+ T + G+P G LP GHP Sbjct: 305 KNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPGHP 340
>HBP1_HUMAN (O60381) HMG box-containing protein 1 (HMG box transcription factor| 1) (High mobility group box transcription factor 1) Length = 514 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 320 KHKQWISSLPTATWLTVGLPRAPRFSGGTSLPMGHP 427 K+K W S P+ T + G+P G LP GHP Sbjct: 305 KNKGWSSFYPSLTVVQHGIPCCEVHIGDVCLPPGHP 340
>ONEC_DROME (Q9NJB5) Homeobox protein onecut| Length = 1081 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 329 VCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPP 222 +C ADD KH A V + + +PV++ P PP Sbjct: 621 ICPADWKADDWKHSNAGVVSLTADMPVVVSLTPTPP 656
>HBP1_RAT (Q62661) HMG box-containing protein 1 (HMG box transcription factor| 1) (High mobility group box transcription factor 1) Length = 513 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 320 KHKQWISSLPTATWLTVGLPRAPRFSGGTSLPMGHP 427 K+K W S P+ T + G+P G LP GHP Sbjct: 303 KNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPGHP 338
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -1 Query: 279 SHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSHEPGQQML 106 S+H+ L PP+ RS+ +PR G + G +R PS LRG + P +L Sbjct: 291 SYHLALQPPQSRPSGSRSSDSPRLGR--KGGHERPPSP-----GLRGLLTDSPAATVL 341
>YRR2_CAEEL (Q09345) Hypothetical protein R144.2| Length = 823 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/43 (39%), Positives = 18/43 (41%) Frame = -1 Query: 300 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRP 172 P Q Q HH QLPPP P G RG H +D P Sbjct: 343 PPFQHPQQHHPQLPPP------PVHQGMGRGYHHNSPPQDPAP 379
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Frame = -1 Query: 222 GAPRGGHSPRSGRDRRPSAANRSHSLR----GPSSHEPG 118 G PR G PR G RP RS + R GP PG Sbjct: 206 GGPRPGGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPG 244
>ANMX_CRILO (Q99MI9) Protein arginine N-methyltransferase (EC 2.1.1.-)| Length = 729 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +3 Query: 198 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 293 AN G+L W +HYD +E A + D++ Sbjct: 45 ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 76
>DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 656 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/53 (39%), Positives = 23/53 (43%) Frame = +3 Query: 102 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQHYDGEE 260 +GA AG A G G G G G +G GA GAGQ DGEE Sbjct: 588 AGAGAGAAGGMGGAGPGGMGGAGPG-GMGGAGPGGMGGAGPGAGAGQQGDGEE 639
>YS88_CAEEL (Q09384) Hypothetical protein ZK945.8| Length = 109 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Frame = -1 Query: 378 GRPTVNQVAVGRLEIHCLCFADPSR---*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRG 208 G ++ +GRL+ +C C P R P T + + H + LP P+G Sbjct: 35 GAGVIDNEHMGRLKSNCCCIYTPPRVWDDPSTWEPEEHETE---HCRGHTLPEKKQKPQG 91 Query: 207 GHSPRSGRDR 178 GH D+ Sbjct: 92 GHGSDKDEDK 101
>ANM7_MOUSE (Q922X9) Protein arginine N-methyltransferase 7 (EC 2.1.1.-)| Length = 692 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +3 Query: 198 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 293 AN G+L W +HYD +E A + D++ Sbjct: 8 ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 39
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = -1 Query: 300 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGH-----SPRSGRDRRPSAANRSHSLR 142 P Q SHH QLP P++ P+S P+ H PR G + PS+++ + L+ Sbjct: 843 PGPQPLFSHHPQLPQPQY----PQSGPYPQPPHGYLSTEPRLGLNFNPSSSHSTGQLK 896
>PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)| Length = 1434 Score = 28.5 bits (62), Expect = 7.7 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Frame = -1 Query: 285 RQSHHMQLPPPRHNVDLPRSTGAPRG--------GHSPRSGRDRRPSAANRSHSLRGPSS 130 RQ + PPR + P PR GHS S RDR RSH+ R P+S Sbjct: 1283 RQGQQPRRDPPREGLRPPPYR--PRRDAFEISTEGHSGPSNRDRSGPRGARSHNPRNPTS 1340 Query: 129 HEPGQQM 109 G + Sbjct: 1341 TAMGSSV 1347
>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A| (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and leucine-rich repeat protein 11) Length = 1146 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -1 Query: 300 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRR 175 P+ Q + H M+ P RH+ PR++G P G + R RR Sbjct: 549 PKIQFTKPHTMR-PASRHSTAPPRTSGTPSGTTASSGARRRR 589
>ANKY1_HUMAN (Q9P2S6) Ankyrin repeat and MYND domain-containing protein 1| (Testis-specific ankyrin-like protein 1) (Zinc-finger MYND domain protein 13) Length = 941 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -1 Query: 267 QLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPS 133 +L PP + LPR +G+ GGH +G+ S +RS SL+G S Sbjct: 392 ELRPPPAPLLLPRVSGSHEGGHFQDTGQ-CGGSIDHRSSSLKGDS 435 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,732,664 Number of Sequences: 219361 Number of extensions: 1546584 Number of successful extensions: 5935 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5871 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
