ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07g10 |
|---|---|
| Clone Library Name | barley_pub |
>PYRD_BURMA (Q62K45) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 345 Score = 35.0 bits (79), Expect = 0.045 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +3 Query: 237 PRIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 PR+P+ P+T+ GL +P ++A ++DG A +G +G Sbjct: 43 PRVPDAPRTVMGLSFRNPVGLAAGLDKDGAAIDGFAALG 81
>PYRD_BURPS (Q63TV1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 342 Score = 35.0 bits (79), Expect = 0.045 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +3 Query: 237 PRIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 PR+P+ P+T+ GL +P ++A ++DG A +G +G Sbjct: 43 PRVPDAPRTVMGLSFRNPVGLAAGLDKDGAAIDGFAALG 81
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 32.3 bits (72), Expect = 0.29 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +3 Query: 102 RRPSLCRAESSQDARQGH---SAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQP 257 RRP R S A G SAPP P SR R +++ +P LP++PE P Sbjct: 1685 RRPRATRKRESLTAHVGPDPCSAPPEPNSRSSRTQSLS---TTPEPTLPQLPEAP 1736
>ROBO4_MOUSE (Q8C310) Roundabout homolog 4 precursor| Length = 1012 Score = 30.8 bits (68), Expect = 0.85 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = -1 Query: 154 WPWRASWLDSARQSE-GRLGRSEPAGPP 74 W WR WL+ A S RLGR P PP Sbjct: 963 WEWRPDWLEDAEISHTQRLGRGLPPWPP 990
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/66 (31%), Positives = 26/66 (39%) Frame = -1 Query: 271 PSRVLGCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLDSARQSEGRLGRS 92 P+ G +G RG G E G GA+ P S + R S G G + Sbjct: 338 PAGAAGATGARGLVG-EPGPAGSKGESGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSA 396 Query: 91 EPAGPP 74 PAGPP Sbjct: 397 GPAGPP 402
>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein| Length = 977 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/84 (30%), Positives = 36/84 (42%) Frame = +3 Query: 78 GPAGSERPRRPSLCRAESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQP 257 GPA E+PRRP R+G + P PP A + +Y + P E Sbjct: 147 GPATQEKPRRP----------RRRGPTRPTPP------GAPPDEVYLSDSP-----AEPA 185 Query: 258 KTLEGLIADDPFRVSASAEEDGTA 329 T+ G + RVS+ + EDG A Sbjct: 186 PTIPGPPSQGDSRVSSPSWEDGAA 209
>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)| Length = 1007 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%) Frame = -1 Query: 154 WPWRASWLDSARQSE-GRLGRSEPAGPP 74 W WR WL+ S RLGR P PP Sbjct: 954 WEWRPDWLEDMEVSHTQRLGRGMPPWPP 981
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/71 (30%), Positives = 28/71 (39%) Frame = -1 Query: 286 SSAMRPSRVLGCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLDSARQSEG 107 + A P ++G G GS G E G GA+ P S + R S G Sbjct: 342 AGATGPRGLVGEPGPAGSKG----------ETGNKGEPGSAGAQGPPGPSGEEGKRGSPG 391 Query: 106 RLGRSEPAGPP 74 G + PAGPP Sbjct: 392 EPGSAGPAGPP 402
>104K_THEPA (P15711) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 924 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +3 Query: 78 GPAGSERPRR-PSLCRAESS-QDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPE 251 GPA +P + P+L + S +D + P S+ R A+ R P+LP++ + Sbjct: 554 GPAREHKPSKIPTLSKKPSGPKDPKHPRDPKEPRKSKSPRTASPT---RRPSPKLPQLSK 610 Query: 252 QPKTLEGLIADDPFRVSASAEEDGT 326 PK+ P R S+ +GT Sbjct: 611 LPKSTSPRSPPPPTRPSSPERPEGT 635
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 29.3 bits (64), Expect = 2.5 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Frame = -1 Query: 307 DAETRNGSSAMRPSRVLGCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLD 128 D+ +G + S + SG GSSG + G G + P + S + Sbjct: 1042 DSSRHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHGQDGPHQQSHQE 1101 Query: 127 SARQ-SEGRLGRS 92 SAR S GR GRS Sbjct: 1102 SARDWSGGRSGRS 1114
>PUR4_PSEPK (Q88P16) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1299 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = -2 Query: 207 NSWPLAVSRASRGG--EARNGPGGRPGSTPH 121 N++P V+ RGG E RN P PG PH Sbjct: 508 NAFPELVNDGGRGGRFELRNVPNDEPGMAPH 538
>BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (BCL-2-binding| athanogene-1) (BAG-1) Length = 355 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 69 TRGGPAGSERPRRPSLCRAESSQDARQGHSA 161 TRG PAG+ +PR R SSQ + G S+ Sbjct: 60 TRGAPAGACKPRVKKKVRPRSSQSEKVGSSS 90
>SOXC_RHOSG (P54998) Dibenzothiophene desulfurization enzyme C (DBT sulfur| dioxygenase) Length = 417 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 Query: 184 PREQGGGGAEWPWRASWLDSARQSEGRLG 98 PRE GG GA+WP + ++G LG Sbjct: 63 PREYGGWGADWPTAIEVVREIAAADGSLG 91
>DEXT_STRMU (Q54443) Dextranase precursor (EC 3.2.1.11)| (Alpha-1,6-glucan-6-glucanohydrolase) Length = 850 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Frame = +3 Query: 201 MNFLYRAAQPELPRIPEQP----KTLEGLIADDPFRVS 302 M ++ +PE P++PEQP +TLE I P VS Sbjct: 729 MIYINETIKPETPKVPEQPQHPARTLEPAIPQTPEAVS 766
>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) Length = 716 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 90 SERPRRPSLCRAESSQDARQGHSAPPPPCS 179 S+ P++PS + + A QG S PPPP S Sbjct: 154 SQPPQQPSSMQTGMNPSAMQGPSPPPPPPS 183
>TAB3_HUMAN (Q8N5C8) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) (NF-kappa-B-activating protein 1) Length = 712 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 90 SERPRRPSLCRAESSQDARQGHSAPPPPCS 179 S+ P++PS + + A QG S PPPP S Sbjct: 154 SQPPQQPSSMQTGMNPSAMQGPSPPPPPPS 183
>PRAX_MOUSE (O55103) Periaxin| Length = 1391 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +3 Query: 123 AESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPEL--PRIP 248 AE +Q AR +APPP ++ AA + A Q EL PR+P Sbjct: 199 AEEAQVARMAAAAPPPRKAKAEAEAATGAGFTAPQIELVGPRLP 242
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 184 PREQGGGGAEWPWRASWLDSARQSEGRLGRSEPAGPP 74 P E+G GA P A D A + G G + PAGPP Sbjct: 303 PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 339
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 184 PREQGGGGAEWPWRASWLDSARQSEGRLGRSEPAGPP 74 P E+G GA P A D A + G G + PAGPP Sbjct: 307 PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 343
>PYRD_RALSO (Q8XYY7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 344 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = +3 Query: 240 RIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 R+ QP+T+ G+ +P ++A ++DG + G +G Sbjct: 44 RVAPQPRTVMGIAFPNPVGLAAGLDKDGAYIDALGALG 81
>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor alphaA-CRYBP1)| (Alpha A-crystallin-binding protein I) (Alpha A-CRYBP1) Length = 2688 Score = 28.1 bits (61), Expect = 5.5 Identities = 27/91 (29%), Positives = 34/91 (37%) Frame = +3 Query: 78 GPAGSERPRRPSLCRAESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQP 257 G G+ P+ E A QGHSA PP S PE P+ E P Sbjct: 2552 GTTGTPETTAPNSKAMELQMPAGQGHSAEPPQGS----------------PEGPQ--ETP 2593 Query: 258 KTLEGLIADDPFRVSASAEEDGTASNGAGEI 350 +T+ G AD R S + D AG + Sbjct: 2594 QTVSGPSADHA-RPEDSTKMDTKKGPSAGHV 2623
>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2| (Syn2)] Length = 1025 Score = 28.1 bits (61), Expect = 5.5 Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +3 Query: 99 PRRPSLC-RAESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQPKTLEGL 275 P R S+ RAES D AP PP G R A M P IPE+ G Sbjct: 453 PSRSSVSSRAESPTDEGV---APTPPLPAGPRPAPMG--------GPPPIPERTSPAVGS 501 Query: 276 IADDPFRVSASAEEDGTASNGAGEIGG 356 I R S S + +S+G +GG Sbjct: 502 IGRLSSRSSISEVPEEPSSSGPSTVGG 528
>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) Length = 1636 Score = 27.7 bits (60), Expect = 7.2 Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 7/97 (7%) Frame = +3 Query: 78 GPAGSERPRRPSLC----RAESS--QDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELP 239 GPA S RP P R SS Q H P P S G P P Sbjct: 1052 GPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPG----------PGPVPPRP 1101 Query: 240 RIPEQPKTL-EGLIADDPFRVSASAEEDGTASNGAGE 347 E P L G A D S ++ GT S G G+ Sbjct: 1102 PAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQ 1138
>SH2D3_HUMAN (Q8N5H7) SH2 domain-containing protein 3C (Novel SH2-containing| protein 3) Length = 860 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 105 RPSLCRAESSQDARQGHSAPPPP 173 RPS+ +A++SQ ARQ A P P Sbjct: 82 RPSIKKAQNSQAARQAQEAGPKP 104
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/77 (29%), Positives = 31/77 (40%) Frame = +3 Query: 81 PAGSERPRRPSLCRAESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQPK 260 PAG +P A SS + G + P P + A L A +PE P P + Sbjct: 1051 PAGPSSSSQPPCSAAVSSGGSVPGAPSCPLPAVQIKEEA----LDEAEEPESPPPPPRSP 1106 Query: 261 TLEGLIADDPFRVSASA 311 + E + D P S SA Sbjct: 1107 SPEPTVVDTPSHASQSA 1123
>P66A_MOUSE (Q8CHY6) Transcriptional repressor p66 alpha (GATA zinc finger| domain-containing protein 2A) Length = 629 Score = 27.7 bits (60), Expect = 7.2 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%) Frame = +3 Query: 78 GPAGSERPRRPSLCRAESSQDARQGHSAPPPPCSRG*RRAAMNFL---YRAAQPELPRIP 248 GP S + P L R + RQ S PPP R + + R Q L R+ Sbjct: 231 GPQASSQVVMPPLVRGAQIHNIRQHSSTGPPPLLLAPRASVPSMQIQGQRIIQQGLIRVA 290 Query: 249 EQPKTLEGLIADDPFRVSASAEEDGTAS 332 P T L+ + P +AS + AS Sbjct: 291 NVPNT--SLLVNIPQPTAASMKGTAVAS 316
>PYRD_SALTY (P25468) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 336 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 240 RIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 ++P +P T GL +P ++A ++DG + G +G Sbjct: 41 KVPTKPVTCMGLTFKNPLGLAAGLDKDGECIDALGAMG 78
>PYRD_SALTI (Q8Z7S9) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 336 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 240 RIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 ++P +P T GL +P ++A ++DG + G +G Sbjct: 41 KVPTKPVTCMGLTFKNPLGLAAGLDKDGECIDALGAMG 78
>PYRD_SALPA (Q5PGE0) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 336 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 240 RIPEQPKTLEGLIADDPFRVSASAEEDGTASNGAGEIG 353 ++P +P T GL +P ++A ++DG + G +G Sbjct: 41 KVPTKPVTCMGLTFKNPLGLAAGLDKDGECIDALGAMG 78
>IER5_MOUSE (O89113) Immediate early response gene 5 protein| Length = 308 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Frame = +3 Query: 81 PAGSERPRRPSLCR-AESSQDARQGHSAPPPPCSR 182 P G RRP C A + + G APP PC R Sbjct: 164 PEGPRAVRRPCGCPPAVEERSSEDGSPAPPAPCPR 198
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/66 (28%), Positives = 24/66 (36%) Frame = -1 Query: 271 PSRVLGCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLDSARQSEGRLGRS 92 P G +G RG G E G GA+ P S + R G G + Sbjct: 332 PVGAAGATGARGIVG-EPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSA 390 Query: 91 EPAGPP 74 P+GPP Sbjct: 391 GPSGPP 396
>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)| Length = 1164 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +3 Query: 81 PAGSERPRRPSLCRAESSQDARQGHSAPPPPCSRG*RRAAMNFLYRAAQPELPRIPEQPK 260 P + P+ P S A + P P + A + PE PR+PE PK Sbjct: 839 PQAPDTPQAPDTPHVPESPKAPEAPRVPESPKTP----EAPHVPESPKAPEAPRVPESPK 894 Query: 261 TLE 269 T E Sbjct: 895 TPE 897
>BACH1_MOUSE (P97302) Transcription regulator protein BACH1 (BTB and CNC homolog| 1) Length = 739 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 165 PPPCSRG*RRAAMNFLYRAAQPELPRIPEQPKTLE 269 PPPC RG AA L + + P PEQ LE Sbjct: 683 PPPCGRG-SSAASQELVQESPPTTAAAPEQATLLE 716
>N4BP1_HUMAN (O75113) NEDD4-binding protein 1 (N4BP1) (Fragment)| Length = 943 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = -1 Query: 181 REQGGGGAEWPWRASWLDSARQSEGRLGRSEPAGPPR 71 R +G GG E P WL S+ R P PPR Sbjct: 6 RGRGRGGREGPTPPDWLGSSGSKLRGRRRRRPPAPPR 42
>ATG2_EMENI (Q5B1T9) Autophagy-related protein 2| Length = 2102 Score = 27.3 bits (59), Expect = 9.4 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = +3 Query: 99 PRRPSL-CRAESSQDARQGHSAPPPPCSRG*RRAAM--NFLYRAAQP--ELPRIPEQPKT 263 P PS R++SSQ + S PP P S AM + ++ +QP ++P Sbjct: 285 PTSPSSPLRSKSSQSSSPASSVPPAPSSASSSTHAMMASTIFEPSQPTVDIPEDEHGVAK 344 Query: 264 LEGLIADDPFRVSASAEEDGTASNG 338 LEG I R S A+ D S+G Sbjct: 345 LEGSIYTYDGRFS-DADTDENRSHG 368
>MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 308 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%) Frame = +3 Query: 219 AAQPELPRIPEQPKTLEGLIADDPFRVSASAEED------GTASNGAG 344 AA+PE P PEQP E + AEE G AS+ AG Sbjct: 222 AAEPEQPEQPEQPAAEEPQAEEQSEAAGEKAEEPAPGATAGDASSAAG 269
>MARCO_MOUSE (Q60754) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) Length = 518 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = -1 Query: 256 GCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLDSARQSEGRLGRSEPAGP 77 G G++G G +P QG G P A L A+ GR G PAGP Sbjct: 291 GSPGVKGDQG-------------KPGVQGVPG---PQGAPGLSGAKGEPGRTGLPGPAGP 334 Query: 76 PRV 68 P + Sbjct: 335 PGI 337
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/66 (31%), Positives = 22/66 (33%) Frame = -1 Query: 271 PSRVLGCSGIRGSSGCXXXXXXXXXXXRQPREQGGGGAEWPWRASWLDSARQSEGRLGRS 92 P G GIRG SG P G G + P LD G G Sbjct: 1180 PQAEKGSEGIRGPSGLPGS----------PGPPGPPGIQGPAGLDGLDGKDGKPGLRGDP 1229 Query: 91 EPAGPP 74 PAGPP Sbjct: 1230 GPAGPP 1235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,230,804 Number of Sequences: 219361 Number of extensions: 567442 Number of successful extensions: 3499 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2966 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3475 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
