>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 381   tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
             ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 33411 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 33352

                                  
Query: 441   cataggatttgccctcctcta 461
             || ||| |||||||| |||||
Sbjct: 33351 cacaggctttgcccttctcta 33331

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                           
Query: 381     tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
               ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 1324968 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 1324909

                                    
Query: 441     cataggatttgccctcctcta 461
               || ||| |||||||| |||||
Sbjct: 1324908 cacaggctttgcccttctcta 1324888

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                           
Query: 381     tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
               ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 1414616 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 1414557

                                    
Query: 441     cataggatttgccctcctcta 461
               || ||| |||||||| |||||
Sbjct: 1414556 cacaggctttgcccttctcta 1414536

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                           
Query: 381     tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
               ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 1412337 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 1412278

                                    
Query: 441     cataggatttgccctcctcta 461
               || ||| |||||||| |||||
Sbjct: 1412277 cacaggctttgcccttctcta 1412257

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                           
Query: 381     tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
               ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 1324968 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 1324909

                                    
Query: 441     cataggatttgccctcctcta 461
               || ||| |||||||| |||||
Sbjct: 1324908 cacaggctttgcccttctcta 1324888

>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157453

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                          
Query: 381    tatcaatcttcttgtgattatcctatggtactcggcgctgggattttgttgctgcttcta 440
              ||||||| | |||||||||| ||||| ||||| |  |||||  ||||||||||| |||||
Sbjct: 104201 tatcaatttgcttgtgattaccctatagtactagctgctggcgttttgttgctgtttcta 104260

                                   
Query: 441    cataggatttgccctcctcta 461
              || ||| |||||||| |||||
Sbjct: 104261 cacaggctttgcccttctcta 104281

>emb|BX649276.6| Zebrafish DNA sequence from clone CH211-79C14 in linkage group 22,
             complete sequence
          Length = 84049

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    caaagcattttttccctgtca 54
             |||||||||||||||||||||
Sbjct: 66552 caaagcattttttccctgtca 66572

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    gctgttcgtcgtcgcgtcga 271
              ||||||||||||||||||||
Sbjct: 914076 gctgttcgtcgtcgcgtcga 914057

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 243     gccgccgctgctgttcgtcgtcgc 266
               ||||||||||||| ||||||||||
Sbjct: 1030599 gccgccgctgctgctcgtcgtcgc 1030576

>ref|XM_838258.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1175)
            partial mRNA
          Length = 6936

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 243  gccgccgctgctgttcgtcgtcgc 266
            ||||||||||||| ||||||||||
Sbjct: 6594 gccgccgctgctgctcgtcgtcgc 6571

>gb|AC117254.3| Mus musculus BAC clone RP24-418D1 from 6, complete sequence
          Length = 172656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   ctgcttctacataggatttg 451
             ||||||||||||||||||||
Sbjct: 38674 ctgcttctacataggatttg 38693

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    cgctgctgttcgtcgtcgcg 267
              ||||||||||||||||||||
Sbjct: 598010 cgctgctgttcgtcgtcgcg 598029

>emb|AL611926.12| Mouse DNA sequence from clone RP23-28G13 on chromosome 11 Contains the
             5' end of the Camk2d gene for calcium/calmodulin-dependent
             protein kinase II delta, the 3' end of a novel gene, a
             ribosomal protein S15a (Rps15a) pseudogene, a ribosomal
             protein S2 (Rps2) pseudogene and two CpG islands, complete
             sequence
          Length = 136392

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   cctcctctacttgctttcct 472
             ||||||||||||||||||||
Sbjct: 12607 cctcctctacttgctttcct 12588

>emb|AL627256.5| Zebrafish DNA sequence from clone RP71-1L10 in linkage group 8 Contains
             part of a gene for a novel peptide transporter, complete
             sequence
          Length = 169757

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   tgtgattgccatttctccac 193
             ||||||||||||||||||||
Sbjct: 18550 tgtgattgccatttctccac 18531

>ref|XM_686107.1| PREDICTED: Danio rerio similar to Ras-related protein Ral-B
            (LOC562731), mRNA
          Length = 1830

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  tgtgattgccatttctccac 193
            ||||||||||||||||||||
Sbjct: 1022 tgtgattgccatttctccac 1003

>emb|BX664716.19| Zebrafish DNA sequence from clone DKEY-3D4 in linkage group 9, complete
              sequence
          Length = 198430

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    tgtgattgccatttctccac 193
              ||||||||||||||||||||
Sbjct: 156483 tgtgattgccatttctccac 156502

>dbj|AK016703.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4933406L23 product:unclassifiable, full
            insert sequence
          Length = 1504

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agacacaggaaaaagagcct 107
            ||||||||||||||||||||
Sbjct: 1168 agacacaggaaaaagagcct 1187

>gb|AC098810.3| Papio anubis clone RP41-317I9, complete sequence
          Length = 166347

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cactgcagcttccttgcttt 139
             ||||||||||||||||||||
Sbjct: 22986 cactgcagcttccttgcttt 22967

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 244     ccgccgctgctgttcgtcgtcgcg 267
               ||||||||||||||||||| ||||
Sbjct: 4293904 ccgccgctgctgttcgtcggcgcg 4293881

>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence
          Length = 198160

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    agacacaggaaaaagagcct 107
             ||||||||||||||||||||
Sbjct: 76505 agacacaggaaaaagagcct 76486

>gb|M33815.1|SMASFUABC S.marcescens periplasmic-binding-protein-dependent iron transport
            protein (sfuABC) genes, complete cds
          Length = 4583

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  gccgccgctgctgttcgtcg 262
            ||||||||||||||||||||
Sbjct: 4082 gccgccgctgctgttcgtcg 4063

>dbj|AP002022.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2198J12, complete
             sequence
          Length = 173933

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    ttttttccctgtcaagggtggtgc 64
             ||||||||| ||||||||||||||
Sbjct: 51001 ttttttcccagtcaagggtggtgc 51024


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,221,244
Number of Sequences: 3902068
Number of extensions: 4221244
Number of successful extensions: 75774
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75498
Number of HSP's gapped (non-prelim): 276
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)