ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 289 bits (146), Expect = 4e-75 Identities = 233/262 (88%) Strand = Plus / Plus Query: 42 cgccgtcgtcggtggcgcggcaggtggcggagattgcggcggagcccgaccgcgccgccg 101 ||||| |||| |||| |||||||||||||||||| || || ||||||||||||||| ||| Sbjct: 3681385 cgccgccgtccgtggagcggcaggtggcggagatagccgccgagcccgaccgcgcctccg 3681444 Query: 102 cgtacgcgcgcctcctccacctgcagcgcgcgtgcgccgacgacccctccgccgcggccg 161 |||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 3681445 cgtacgcgcgtctcctccacctgcagcgcgcgtgcgccgatgacccctccgcggccgccg 3681504 Query: 162 acctcgccgcggcctccccctccgccctgctcccgctcctcctccgcgacgccgcccaag 221 |||||||||| |||||||| ||| ||| |||||||||||||| |||||||||| | Sbjct: 3681505 acctcgccgcagcctccccttccatcctcctcccgctcctcctacgcgacgccggtgacc 3681564 Query: 222 atgacgaggccgtcgccgcctccgccctcaagtgcctcggcttcgcgctctaccaccccg 281 ||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| || | Sbjct: 3681565 gtgatgaggccgtcgccgcctccgcgctcaagtgccttggcttcacgctctaccatccgg 3681624 Query: 282 tcctcgtctccaccgtctcagg 303 |||||||||||||||||||||| Sbjct: 3681625 tcctcgtctccaccgtctcagg 3681646 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 363 aggctatttgtaatcttgcagtctggtgcatttctgttcaacaattggaggct 415 |||||||||||||||| | || |||||||| ||||| ||| ||||||||||| Sbjct: 3683014 aggctatttgtaatctgggtgtgtggtgcatctctgtgcaagaattggaggct 3683066
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 289 bits (146), Expect = 4e-75 Identities = 233/262 (88%) Strand = Plus / Plus Query: 42 cgccgtcgtcggtggcgcggcaggtggcggagattgcggcggagcccgaccgcgccgccg 101 ||||| |||| |||| |||||||||||||||||| || || ||||||||||||||| ||| Sbjct: 75613 cgccgccgtccgtggagcggcaggtggcggagatagccgccgagcccgaccgcgcctccg 75672 Query: 102 cgtacgcgcgcctcctccacctgcagcgcgcgtgcgccgacgacccctccgccgcggccg 161 |||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 75673 cgtacgcgcgtctcctccacctgcagcgcgcgtgcgccgatgacccctccgcggccgccg 75732 Query: 162 acctcgccgcggcctccccctccgccctgctcccgctcctcctccgcgacgccgcccaag 221 |||||||||| |||||||| ||| ||| |||||||||||||| |||||||||| | Sbjct: 75733 acctcgccgcagcctccccttccatcctcctcccgctcctcctacgcgacgccggtgacc 75792 Query: 222 atgacgaggccgtcgccgcctccgccctcaagtgcctcggcttcgcgctctaccaccccg 281 ||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| || | Sbjct: 75793 gtgatgaggccgtcgccgcctccgcgctcaagtgccttggcttcacgctctaccatccgg 75852 Query: 282 tcctcgtctccaccgtctcagg 303 |||||||||||||||||||||| Sbjct: 75853 tcctcgtctccaccgtctcagg 75874 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 363 aggctatttgtaatcttgcagtctggtgcatttctgttcaacaattggaggct 415 |||||||||||||||| | || |||||||| ||||| ||| ||||||||||| Sbjct: 77242 aggctatttgtaatctgggtgtgtggtgcatctctgtgcaagaattggaggct 77294
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 ccgccgcggccgacctcgccgcgg 173 |||||||||||||||||||||||| Sbjct: 193079 ccgccgcggccgacctcgccgcgg 193056
>gb|AE011824.1| Xanthomonas axonopodis pv. citri str. 306, section 202 of 469 of the complete genome Length = 11466 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 80 gcggagcccgaccgcgccgccgcg 103 |||||||||||||||||||||||| Sbjct: 4894 gcggagcccgaccgcgccgccgcg 4871
>ref|XM_469389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1706 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 187 cctgctcccgctcctcctccgcgacgccgcc 217 ||||| ||||| ||||||||||||||||||| Sbjct: 108 cctgcccccgcgcctcctccgcgacgccgcc 138
>ref|NM_003322.2| Homo sapiens tubby like protein 1 (TULP1), mRNA Length = 2090 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 168 ccgcggcctccccctccgccctgctcc 194 ||||||||||||||||||||| ||||| Sbjct: 223 ccgcggcctccccctccgcccagctcc 197
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgcgacgccgcc 217 ||||| ||||| ||||||||||||||||||| Sbjct: 27703439 cctgcccccgcgcctcctccgcgacgccgcc 27703409 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgccctgctcccgctcctcctccgc 208 ||||||||||| ||||||||||||| Sbjct: 2350193 cgccctgctcctgctcctcctccgc 2350217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cgcgcctcctcccgcaccgc 27 |||||||||||||||||||| Sbjct: 29498684 cgcgcctcctcccgcaccgc 29498665 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 acctccatgccgccgtcgtcggtggcgc 59 |||||||||||| ||||| ||||||||| Sbjct: 7264091 acctccatgccggcgtcgccggtggcgc 7264064
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgcgacgccgcc 217 ||||| ||||| ||||||||||||||||||| Sbjct: 27794762 cctgcccccgcgcctcctccgcgacgccgcc 27794732 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgccctgctcccgctcctcctccgc 208 ||||||||||| ||||||||||||| Sbjct: 2350303 cgccctgctcctgctcctcctccgc 2350327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cgcgcctcctcccgcaccgc 27 |||||||||||||||||||| Sbjct: 29590106 cgcgcctcctcccgcaccgc 29590087 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 acctccatgccgccgtcgtcggtggcgc 59 |||||||||||| ||||| ||||||||| Sbjct: 7261986 acctccatgccggcgtcgccggtggcgc 7261959
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 187 cctgctcccgctcctcctccgcgacgccgcc 217 ||||| ||||| ||||||||||||||||||| Sbjct: 110455 cctgcccccgcgcctcctccgcgacgccgcc 110485
>gb|U82468.1|HSU82468 Human tubby related protein 1 (TULP1) mRNA, complete cds Length = 2116 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 168 ccgcggcctccccctccgccctgctcc 194 ||||||||||||||||||||| ||||| Sbjct: 249 ccgcggcctccccctccgcccagctcc 223
>ref|XM_523479.1| PREDICTED: Pan troglodytes LOC468088 (LOC468088), mRNA Length = 3912 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 ctccccctccgccctgctcccg 196 |||||||||||||||||||||| Sbjct: 843 ctccccctccgccctgctcccg 864
>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence Length = 80662 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 ctccccctccgccctgctcccg 196 |||||||||||||||||||||| Sbjct: 66376 ctccccctccgccctgctcccg 66355
>gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's Hospital Oakland Research Institute) complete sequence Length = 173190 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 ttgctcaatgctattgtttatg 464 |||||||||||||||||||||| Sbjct: 159168 ttgctcaatgctattgtttatg 159189 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 ttgctcaatgctattgtttatg 464 |||||||||||||||||||||| Sbjct: 144560 ttgctcaatgctattgtttatg 144581
>emb|CR937545.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YN23AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 775 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgaggccgtcgccgcctccgcc 247 |||||||||||||||||||||| Sbjct: 35 cgaggccgtcgccgcctccgcc 56
>emb|CR937442.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YB20AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 783 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgaggccgtcgccgcctccgcc 247 |||||||||||||||||||||| Sbjct: 35 cgaggccgtcgccgcctccgcc 56
>ref|NM_001000504.1| Rattus norvegicus olfactory receptor 37 (Olr37), mRNA Length = 966 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 catgaccaccaagatgaaggct 367 |||||||||||||||||||||| Sbjct: 369 catgaccaccaagatgaaggct 348
>ref|NM_001000156.1| Rattus norvegicus olfactory receptor 122 (predicted) (Olr122_predicted), mRNA Length = 951 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 ttgctcaatgctattgtttatg 464 |||||||||||||||||||||| Sbjct: 865 ttgctcaatgctattgtttatg 886
>gb|AC087239.18| Homo sapiens 12p BAC RP11-707G18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178006 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 ccgcgccgccgcgtacgcgcgcctcc 116 |||||||||||||| ||||||||||| Sbjct: 153093 ccgcgccgccgcgtccgcgcgcctcc 153068
>gb|AF317732.1|AF317732 Chlamydomonas reinhardtii CIA5 gene, complete cds Length = 6481 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgc 208 |||||||||||||||||||||| Sbjct: 2471 cctgctcccgctcctcctccgc 2450
>dbj|AB120305.1| Hordeum vulgare GLC gene for acidic b-1,3-glucanase, partial cds Length = 605 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 cgccgacgacccctccgccgcggccg 161 |||| ||||||||||||||||||||| Sbjct: 525 cgccaacgacccctccgccgcggccg 550
>gb|AY107616.1| Zea mays PCO064762 mRNA sequence Length = 1027 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 gctcctcctccgcgacgccgcc 217 |||||||||||||||||||||| Sbjct: 182 gctcctcctccgcgacgccgcc 161
>gb|AF091561.1|AF091561 Rattus norvegicus isolate AIV-LY1 olfactory receptor mRNA, partial cds Length = 663 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 catgaccaccaagatgaaggct 367 |||||||||||||||||||||| Sbjct: 165 catgaccaccaagatgaaggct 144
>dbj|AB052696.1| Chlamydomonas reinhardtii mRNA for CCM1-B, complete cds Length = 5125 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgc 208 |||||||||||||||||||||| Sbjct: 1921 cctgctcccgctcctcctccgc 1900
>dbj|AB052695.1| Chlamydomonas reinhardtii mRNA for CCM1-A, complete cds Length = 5128 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgc 208 |||||||||||||||||||||| Sbjct: 1924 cctgctcccgctcctcctccgc 1903
>dbj|AB052694.1| Chlamydomonas reinhardtii gene for CCM1-A, CCM1-B, complete cds Length = 8474 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctccgc 208 |||||||||||||||||||||| Sbjct: 2983 cctgctcccgctcctcctccgc 2962
>ref|NM_188078.1| Oryza sativa (japonica cultivar-group), Ozsa8498 predicted mRNA Length = 1653 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcccgctcctcctccgcgacg 212 ||||||||||||||||||||| Sbjct: 101 tcccgctcctcctccgcgacg 81
>ref|XM_518426.1| PREDICTED: Pan troglodytes similar to Tubby related protein 1 (Tubby-like protein 1) (LOC462638), mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ccgcggcctccccctccgccc 188 ||||||||||||||||||||| Sbjct: 210 ccgcggcctccccctccgccc 190
>ref|XM_474564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgacgacccctccgccgcggc 159 ||||||||||||||||||||| Sbjct: 177 cgacgacccctccgccgcggc 157
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ggagcccgaccgcgccgccgc 102 ||||||||||||||||||||| Sbjct: 47534 ggagcccgaccgcgccgccgc 47554
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgtcgtcggtggcgcggcag 64 ||||||||||||||| ||||||||| Sbjct: 1202163 gccgccgtcgtcggtcgcgcggcag 1202187
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccgccgtcgtcggtggcgcggcag 64 ||||||||||||||| ||||||||| Sbjct: 2313911 gccgccgtcgtcggtcgcgcggcag 2313887
>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence Length = 198063 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 174 cctccccctccgccctgctcccgctcctcctcc 206 ||||||||||| |||| ||||| |||||||||| Sbjct: 59431 cctccccctcccccctcctccccctcctcctcc 59463
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence Length = 208221 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgccctgctcccgctcctcctccgc 208 |||||| |||||||||||||||||| Sbjct: 113132 cgccctcctcccgctcctcctccgc 113156
>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the PMVK gene for phosphomevalonate kinase, the PBXIP1 gene for pre-B-cell leukemia transcription factor interacting protein 1, the gene for pygopus 2 (PYGO2), the SHC1 gene for SHC (Src homology 2 domain containing) transforming protein 1, the CKS1B gene for CDC28 protein kinase regulatory subunit 1B, the gene for FAD-synthetase (PP591), the LENEP gene for lens epithelial protein, the ZFP67 gene for zinc finger protein 67 homolog (mouse), the gene for a novel protein (FLJ32934), a novel gene, the gene for a novel protein (FLJ32785) the 5' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), and two CpG islands, complete sequence Length = 182166 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tccccctccgccctgctcccg 196 ||||||||||||||||||||| Sbjct: 145704 tccccctccgccctgctcccg 145724
>emb|AL353726.22| Human DNA sequence from clone RP11-345K9 on chromosome 9 Contains a novel pseudogene, complete sequence Length = 71754 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggcctccccctccgccctgct 192 ||||||||||||||||||||| Sbjct: 26334 ggcctccccctccgccctgct 26354
>emb|AJ786595.1| Cordyceps sp. 3083.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, strain 3083.H Length = 501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 cgacctcgccgcggcctcccc 180 ||||||||||||||||||||| Sbjct: 404 cgacctcgccgcggcctcccc 424
>emb|AJ786594.1| Cordyceps sp. 3002.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, strain 3002.H Length = 501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 cgacctcgccgcggcctcccc 180 ||||||||||||||||||||| Sbjct: 404 cgacctcgccgcggcctcccc 424
>emb|AJ786593.1| Cordyceps sp. 2870.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, strain 2870.H Length = 497 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 cgacctcgccgcggcctcccc 180 ||||||||||||||||||||| Sbjct: 402 cgacctcgccgcggcctcccc 422
>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin, strain DSM 5908 Length = 66669 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgcggccgacctcgccgcggc 174 ||||||||||||||||||||| Sbjct: 4822 cgcggccgacctcgccgcggc 4842
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgtcgtcggtggcgcggcag 64 ||||||||||||||| ||||||||| Sbjct: 2071180 gccgccgtcgtcggtcgcgcggcag 2071204
>dbj|AK127884.1| Homo sapiens cDNA FLJ45990 fis, clone RECTM2001519 Length = 1567 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tccccctccgccctgctcccg 196 ||||||||||||||||||||| Sbjct: 310 tccccctccgccctgctcccg 330
>gb|AY666014.1| Thinopyrum elongatum early salt stress and cold acclimation-induced protein 2-1 (Esi2) gene, complete cds Length = 3027 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 cctccatgccgccgtcgtcgg 53 ||||||||||||||||||||| Sbjct: 2153 cctccatgccgccgtcgtcgg 2173
>ref|XM_212241.5| PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC645961), mRNA Length = 4467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 ggcctccccctccgccctgct 192 ||||||||||||||||||||| Sbjct: 972 ggcctccccctccgccctgct 952
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgacgacccctccgccgcggc 159 ||||||||||||||||||||| Sbjct: 4268594 cgacgacccctccgccgcggc 4268574 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 23988484 cctgctcccgctcctcctcc 23988465
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tcgccgcctccgccctcaagt 254 ||||||||||||||||||||| Sbjct: 20397807 tcgccgcctccgccctcaagt 20397787 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ccgacgacccctccgccgcggccg 161 ||||||||||||||||||| |||| Sbjct: 3535254 ccgacgacccctccgccgccgccg 3535231
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgccctgctcccgctcctcctccgc 208 ||||||||||| ||||||||||||| Sbjct: 67035 cgccctgctcctgctcctcctccgc 67059
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 135 gcgccgacgacccctccgccgcggccgacctcg 167 ||||||||||| || ||||||| |||||||||| Sbjct: 8114751 gcgccgacgacgccgccgccgccgccgacctcg 8114783 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgccgccgcgtacgcgcgcc 113 |||||||||||||||||||| Sbjct: 27518598 cgccgccgcgtacgcgcgcc 27518617 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ccgcgccgccgcgtacgcgcgcct 114 ||||||||||||| |||||||||| Sbjct: 16010716 ccgcgccgccgcgcacgcgcgcct 16010693 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 166 cgccgcggcctccccctccgccctgctcccgc 197 |||||| |||||| |||||||||||| ||||| Sbjct: 9485404 cgccgccgcctccgcctccgccctgcccccgc 9485435
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcccgctcctcctccgcgacg 212 ||||||||||||||||||||| Sbjct: 9458122 tcccgctcctcctccgcgacg 9458102
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgacgacccctccgccgcggc 159 ||||||||||||||||||||| Sbjct: 16462 cgacgacccctccgccgcggc 16442
>gb|AC119977.18| Mus musculus chromosome 5, clone RP24-486F14, complete sequence Length = 151580 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 174 cctccccctccgccctgctcccgctcctcctcc 206 ||||||| ||| ||||||||| ||||||||||| Sbjct: 91223 cctccccatcccccctgctcctgctcctcctcc 91191
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene locus, complete sequence Length = 108584 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ctccatgccgccgtcgtcggtggcg 58 |||||||||||||||| |||||||| Sbjct: 16872 ctccatgccgccgtcgacggtggcg 16848
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcccgctcctcctccgcgacg 212 ||||||||||||||||||||| Sbjct: 128449 tcccgctcctcctccgcgacg 128429
>gb|AF034919.1|HSTULP1S01 Homo sapiens tubby like protein 1 (TULP1) gene, exons 1-8 Length = 4717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ccgcggcctccccctccgccc 188 ||||||||||||||||||||| Sbjct: 1335 ccgcggcctccccctccgccc 1315
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 135 gcgccgacgacccctccgccgcggccgacctcg 167 ||||||||||| || ||||||| |||||||||| Sbjct: 102944 gcgccgacgacgccgccgccgccgccgacctcg 102976
>dbj|AK121451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142K21, full insert sequence Length = 5445 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgccctgctcccgctcctcctccgc 208 ||||||||||| ||||||||||||| Sbjct: 664 cgccctgctcctgctcctcctccgc 688
>dbj|AK065504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027C16, full insert sequence Length = 1823 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 135 gcgccgacgacccctccgccgcggccgacctcg 167 ||||||||||| || ||||||| |||||||||| Sbjct: 433 gcgccgacgacgccgccgccgccgccgacctcg 465
>gb|AC139329.3| Mus musculus BAC clone RP24-317B10 from 17, complete sequence Length = 139190 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 174 cctccccctccgccctgctcccgctcctcctcc 206 ||||||||||| |||| ||||| |||||||||| Sbjct: 113932 cctccccctcccccctcctccccctcctcctcc 113900
>gb|AC122529.5| Mus musculus BAC clone RP24-511F2 from 3, complete sequence Length = 159294 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 174 cctccccctccgccctgctcccgctcctcctcc 206 ||||||||||| |||| ||||| |||||||||| Sbjct: 156028 cctccccctcccccctcctccccctcctcctcc 156060
>gb|AF063666.1|MMCOLLAG01 Mus musculus type XIII collagen (col13a1) gene, exon 1 Length = 7296 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 cgccctgctcccgctcctcctccgc 208 |||||| |||||||||||||||||| Sbjct: 4390 cgccctcctcccgctcctcctccgc 4366
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 142 cgacccctccgccgcggccgacctcgccgcggc 174 ||||||| ||||||||||||||| || |||||| Sbjct: 76355 cgaccccgccgccgcggccgaccgcgacgcggc 76323
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 cgccgacgacccctccgccgcggcc 160 |||||||||||| |||||||||||| Sbjct: 3056228 cgccgacgacccgtccgccgcggcc 3056204
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tcgccgcctccgccctcaagt 254 ||||||||||||||||||||| Sbjct: 20324021 tcgccgcctccgccctcaagt 20324001 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ccgacgacccctccgccgcggccg 161 ||||||||||||||||||| |||| Sbjct: 3535199 ccgacgacccctccgccgccgccg 3535176
>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18, complete sequence Length = 132854 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgacgacccctccgccgcggc 159 ||||||||||||||||||||| Sbjct: 111658 cgacgacccctccgccgcggc 111638
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 tcgccgcctccgccctcaagt 254 ||||||||||||||||||||| Sbjct: 113894 tcgccgcctccgccctcaagt 113914
>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence Length = 202603 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 174 cctccccctccgccctgctcccgctcctcctcc 206 ||||||||||| |||| ||||| |||||||||| Sbjct: 161381 cctccccctcccccctcctccccctcctcctcc 161413
>gb|M91814.1|BLYGLU2X Barley beta-1,3-glucanase (GLU2) gene, exons 1-2 Length = 2301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 acgacccctccgccgcggccg 161 ||||||||||||||||||||| Sbjct: 1164 acgacccctccgccgcggccg 1184
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 180925 cctgctcccgctcctcctcc 180944
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 ctcaagtgcctcggcttcgcgctctacc 275 |||||| |||||||| |||||||||||| Sbjct: 127299 ctcaagagcctcggcctcgcgctctacc 127272
>ref|XM_475275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1593 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 ctcaagtgcctcggcttcgcgctctacc 275 |||||| |||||||| |||||||||||| Sbjct: 1339 ctcaagagcctcggcctcgcgctctacc 1366
>ref|NM_197511.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.15), mRNA Length = 549 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 403 ccatgtcgtcgtcgtcggtggcccggcaggtg 372
>ref|XM_469606.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1029 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cgcgcctcctcccgcaccgc 27 |||||||||||||||||||| Sbjct: 128 cgcgcctcctcccgcaccgc 147
>ref|XM_513826.1| PREDICTED: Pan troglodytes LOC457331 (LOC457331), mRNA Length = 1351 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 258 cctgctcccgctcctcctcc 239
>ref|XM_472902.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1641 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 76 cctgctcccgctcctcctcc 57
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cggccgacctcgccgcggcc 175 |||||||||||||||||||| Sbjct: 125764 cggccgacctcgccgcggcc 125783
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cgctcctcctccgcgacgccgccc 218 ||||||||| |||||||||||||| Sbjct: 207961 cgctcctcccccgcgacgccgccc 207938
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 tttgtaatcttgcagtctggtgca 392 |||||||| ||||||||||||||| Sbjct: 328306 tttgtaatgttgcagtctggtgca 328283
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ccgcggccgacctcgccgcggcct 176 ||||||||||| |||||||||||| Sbjct: 10518 ccgcggccgacatcgccgcggcct 10541
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tcctcctccgcgacgccgcc 217 |||||||||||||||||||| Sbjct: 132384 tcctcctccgcgacgccgcc 132403
>ref|XM_601982.2| PREDICTED: Bos taurus similar to olfactory receptor Olr1307 (LOC523680), mRNA Length = 1065 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gcgcgcctcctccacctgcagcgc 130 |||||||| ||||||||||||||| Sbjct: 828 gcgcgccttctccacctgcagcgc 851
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cggagattgcggcggagcccgacc 92 ||||||||||||| |||||||||| Sbjct: 1857079 cggagattgcggctgagcccgacc 1857102
>ref|XM_950715.1| Neurospora crassa OR74A hypothetical protein (NCU03506.1) partial mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 cgacgacccctccgccgcggccga 162 ||||||||||||||||||| |||| Sbjct: 168 cgacgacccctccgccgcgcccga 191
>gb|BC116458.1| Homo sapiens integrator complex subunit 3, mRNA (cDNA clone MGC:131827 IMAGE:5752962), complete cds Length = 4632 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 649 cctgctcccgctcctcctcc 630
>ref|XM_322763.1| Neurospora crassa OR74A predicted protein (NCU03506.1) partial mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 cgacgacccctccgccgcggccga 162 ||||||||||||||||||| |||| Sbjct: 168 cgacgacccctccgccgcgcccga 191
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 ctcaagtgcctcggcttcgcgctctacc 275 |||||| |||||||| |||||||||||| Sbjct: 15899 ctcaagagcctcggcctcgcgctctacc 15872
>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA Length = 4025 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atcatgaccaccaagatgaa 363 |||||||||||||||||||| Sbjct: 3852 atcatgaccaccaagatgaa 3871
>ref|XM_867588.1| PREDICTED: Bos taurus similar to CG17665-PA.3, transcript variant 2 (LOC511052), mRNA Length = 4069 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 80 cctgctcccgctcctcctcc 61
>ref|NM_178745.3| Mus musculus RIKEN cDNA 6330442E10 gene (6330442E10Rik), mRNA Length = 3880 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 207 gctcccgctcctcctccgcg 188
>gb|BC068148.1| Mus musculus RIKEN cDNA 4732460K03 gene, mRNA (cDNA clone IMAGE:30531752), partial cds Length = 6088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 1044 cctcgccgcggcctccccct 1063
>ref|XM_991918.1| PREDICTED: Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 (Plekhh1), mRNA Length = 8130 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 516 gctcccgctcctcctccgcg 535
>ref|XM_904513.2| PREDICTED: Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 1, transcript variant 5 (Plekhh1), mRNA Length = 8130 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 516 gctcccgctcctcctccgcg 535
>ref|XM_126961.7| PREDICTED: Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 1, transcript variant 1 (Plekhh1), mRNA Length = 8130 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 516 gctcccgctcctcctccgcg 535
>ref|XM_980879.1| PREDICTED: Mus musculus similar to PEST-containing nuclear protein (PCNP) (LOC666005), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 39 cctcgccgcggcctccccct 20
>ref|XM_981146.1| PREDICTED: Mus musculus similar to PEST-containing nuclear protein (PCNP) (LOC670412), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 39 cctcgccgcggcctccccct 20
>ref|XM_973502.1| PREDICTED: Mus musculus similar to PEST-containing nuclear protein (PCNP) (LOC674299), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 39 cctcgccgcggcctccccct 20
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aggtggcggagattgcggcg 82 |||||||||||||||||||| Sbjct: 2522557 aggtggcggagattgcggcg 2522576
>ref|XM_568339.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNM00680) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cgctcctcctccgcgacgccgccc 218 ||||||||| |||||||||||||| Sbjct: 31 cgctcctcccccgcgacgccgccc 8
>ref|XM_568448.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM00670) partial mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cgctcctcctccgcgacgccgccc 218 ||||||||| |||||||||||||| Sbjct: 38 cgctcctcccccgcgacgccgccc 61
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gccgcggccgacctcgccgc 171 |||||||||||||||||||| Sbjct: 137351 gccgcggccgacctcgccgc 137332
>ref|XM_847498.1| PREDICTED: Canis familiaris similar to CG17665-PA.3, transcript variant 1 (LOC610579), mRNA Length = 3141 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 80 cctgctcccgctcctcctcc 61
>ref|XM_860891.1| PREDICTED: Canis familiaris similar to CG17665-PA.3, transcript variant 2 (LOC610579), mRNA Length = 2447 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 80 cctgctcccgctcctcctcc 61
>gb|AC145866.3| Pan troglodytes BAC clone RP43-21B7 from 7, complete sequence Length = 189814 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tccccctccgccctgctccc 195 |||||||||||||||||||| Sbjct: 175344 tccccctccgccctgctccc 175363
>gb|BC105094.1| Homo sapiens integrator complex subunit 3, mRNA (cDNA clone MGC:132754 IMAGE:8144097), complete cds Length = 3205 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 117 cctgctcccgctcctcctcc 98
>gb|BC105092.1| Homo sapiens integrator complex subunit 3, mRNA (cDNA clone MGC:132752 IMAGE:8144095), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 117 cctgctcccgctcctcctcc 98
>gb|BC055344.1| Mus musculus integrator complex subunit 3, transcript variant 1, mRNA (cDNA clone MGC:65702 IMAGE:6827687), complete cds Length = 4016 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 304 cctgctcccgctcctcctcc 285
>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a survival of motor neuron protein interacting protein 1 pseudogene (SIP1), a novel gene (FLJ21919), two novel genes, a novel gene, the SLC27A3 gene for solute carrier family 27 (fatty acid transporter), member 3, a pseudogene similar to part of putative neuronal cell adhesion molecule (PUNC), the 3' end of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), a adipose differentiation-related protein (ADFP) pseudogene and a CpG island, complete sequence Length = 150166 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 13148 cctgctcccgctcctcctcc 13129
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 7735 ccatgtcgtcgtcgtcggtggcccggcaggtg 7766
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 cgccgtcgtcggtggcgcggcagg 65 ||||||||||||||||| |||||| Sbjct: 2143341 cgccgtcgtcggtggcggggcagg 2143318
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tgccgccgtcgtcggtggcg 58 |||||||||||||||||||| Sbjct: 4111929 tgccgccgtcgtcggtggcg 4111910
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgcggccgacctcgccg 170 |||||||||||||||||||| Sbjct: 49937 cgccgcggccgacctcgccg 49918
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 150 ccgccgcggccgacctcgccgcggcctccccc 181 ||||||||||||||||||| | ||||| |||| Sbjct: 172713 ccgccgcggccgacctcgcggaggcctgcccc 172744
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgcggccgacctcgccgcgg 173 |||||||||||||||||||| Sbjct: 201555 cgcggccgacctcgccgcgg 201536
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tccgccgcggccgacctcgc 168 |||||||||||||||||||| Sbjct: 67635 tccgccgcggccgacctcgc 67616
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 153457 cctgctcccgctcctcctcc 153438
>ref|NM_178876.2| Mus musculus integrator complex subunit 3 (Ints3), transcript variant 2, mRNA Length = 4371 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 769 cctgctcccgctcctcctcc 750
>ref|NM_145540.2| Mus musculus integrator complex subunit 3 (Ints3), transcript variant 1, mRNA Length = 4452 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 769 cctgctcccgctcctcctcc 750
>emb|CR857667.1| Pongo pygmaeus mRNA; cDNA DKFZp469P1817 (from clone DKFZp469P1817) Length = 4532 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 657 cctgctcccgctcctcctcc 638
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 36491 ccatgtcgtcgtcgtcggtggcccggcaggtg 36460
>ref|NM_001024622.2| Mus musculus PEST proteolytic signal containing nuclear protein (Pcnp), mRNA Length = 2300 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 48 cctcgccgcggcctccccct 29
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cctccgccgcggccgacctc 166 |||||||||||||||||||| Sbjct: 691935 cctccgccgcggccgacctc 691954
>emb|CR749376.1| Homo sapiens mRNA; cDNA DKFZp686O20115 (from clone DKFZp686O20115) Length = 6229 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 655 cctgctcccgctcctcctcc 636
>emb|CR627233.1| Homo sapiens mRNA; cDNA DKFZp781I1253 (from clone DKFZp781I1253) Length = 5740 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 654 cctgctcccgctcctcctcc 635
>emb|AL832133.1|HSM803440 Homo sapiens mRNA; cDNA DKFZp686I1710 (from clone DKFZp686I1710) Length = 5631 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 38 cctgctcccgctcctcctcc 19
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atcatgaccaccaagatgaa 363 |||||||||||||||||||| Sbjct: 68309 atcatgaccaccaagatgaa 68328
>ref|NM_023015.3| Homo sapiens integrator complex subunit 3 (INTS3), mRNA Length = 4538 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 630 cctgctcccgctcctcctcc 611
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 acctccatgccgccgtcgtcggtggcgc 59 |||||||||||| ||||| ||||||||| Sbjct: 15347 acctccatgccggcgtcgccggtggcgc 15320
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcccgctcctcctccgcga 210 |||||||||||||||||||| Sbjct: 1757540 ctcccgctcctcctccgcga 1757521
>gb|AC110076.4| Homo sapiens BAC clone RP11-309M5 from 4, complete sequence Length = 105211 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 11320 cctgctcccgctcctcctcc 11301
>ref|NM_079214.2| Drosophila melanogaster Thioredoxin-like CG5495-RA (Txl), mRNA Length = 1151 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atcatgaccaccaagatgaa 363 |||||||||||||||||||| Sbjct: 965 atcatgaccaccaagatgaa 984
>dbj|AK146699.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920043J02 product:hypothetical Glycine-rich region profile/Immunoglobulin/major histocompatibility complex containing protein, full insert sequence Length = 4338 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 663 cctgctcccgctcctcctcc 644
>dbj|AK147865.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270072C07 product:hypothetical Glycine-rich region profile/Immunoglobulin/major histocompatibility complex containing protein, full insert sequence Length = 3780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 748 cctgctcccgctcctcctcc 729
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ggcggagcccgaccgcgccgccgc 102 ||||||| |||||||||||||||| Sbjct: 380568 ggcggaggccgaccgcgccgccgc 380545
>dbj|AK168723.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920047K03 product:PEST-containing nuclear protein homolog [Homo sapiens], full insert sequence Length = 2199 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 28 cctcgccgcggcctccccct 9
>dbj|AK166071.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730035F23 product:Similar to PEST-containing nuclear protein homolog [Homo sapiens], full insert sequence Length = 633 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 32 cctcgccgcggcctccccct 13
>gb|AC093046.1| Drosophila melanogaster, chromosome 2R, region 43D-43E, BAC clone BACR29D02, complete sequence Length = 158372 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggcaggtggcggagattgcg 79 |||||||||||||||||||| Sbjct: 51406 ggcaggtggcggagattgcg 51387
>dbj|AK040147.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430070A22 product:hypothetical Glycine-rich region containing protein, full insert sequence Length = 2230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 759 cctgctcccgctcctcctcc 740
>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone BACR04H12, complete sequence Length = 175285 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggcaggtggcggagattgcg 79 |||||||||||||||||||| Sbjct: 123923 ggcaggtggcggagattgcg 123904
>tpg|BK005722.1| TPA: TPA_exp: Homo sapiens integrator complex subunit 3 gene, complete cds Length = 6126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 648 cctgctcccgctcctcctcc 629
>dbj|AK033296.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030487I22 product:hypothetical Glycine-rich region/Immunoglobulin and major histocompatibility complex domain containing protein, full insert sequence Length = 4037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 436 cctgctcccgctcctcctcc 417
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 20158756 ccatgtcgtcgtcgtcggtggcccggcaggtg 20158725
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 18585759 gctcccgctcctcctccgcg 18585778
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgcagtctggtgcatttctg 398 |||||||||||||||||||| Sbjct: 15964024 tgcagtctggtgcatttctg 15964005
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tcctcctccgcgacgccgcc 217 |||||||||||||||||||| Sbjct: 28052219 tcctcctccgcgacgccgcc 28052238 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 ctcaagtgcctcggcttcgcgctctacc 275 |||||| |||||||| |||||||||||| Sbjct: 21000521 ctcaagagcctcggcctcgcgctctacc 21000494 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cggccgacctcgccgcggcc 175 |||||||||||||||||||| Sbjct: 18652649 cggccgacctcgccgcggcc 18652668
>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence Length = 196206 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcggcctccccctccgccc 188 |||||||||||||||||||| Sbjct: 117992 cgcggcctccccctccgccc 117973
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccgacctcgccgcggcctcc 178 |||||||||||||||||||| Sbjct: 6406326 ccgacctcgccgcggcctcc 6406307
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cgcgcctcctcccgcaccgc 27 |||||||||||||||||||| Sbjct: 21314 cgcgcctcctcccgcaccgc 21295
>ref|XM_346076.2| PREDICTED: Rattus norvegicus similar to aquaporin 12 (LOC367316), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gcctcctccacctgcagcgc 130 |||||||||||||||||||| Sbjct: 668 gcctcctccacctgcagcgc 687
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 gccgcggccgacctcgccgcggcc 175 |||||||||| ||||||||||||| Sbjct: 2777039 gccgcggccgtcctcgccgcggcc 2777016 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgcggccgacctcgccgcgg 173 |||||||||||||||||||| Sbjct: 1808900 cgcggccgacctcgccgcgg 1808919 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 cgacccctccgccgcggccgacct 165 |||||||||||||| ||||||||| Sbjct: 1373398 cgacccctccgccgtggccgacct 1373375
>ref|XM_342288.2| PREDICTED: Rattus norvegicus similar to expressed sequence C77668 (predicted) (LOC361988), mRNA Length = 4462 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 765 cctgctcccgctcctcctcc 746
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 acctccatgccgccgtcgtcggtggcgc 59 |||||||||||| ||||| ||||||||| Sbjct: 90844 acctccatgccggcgtcgccggtggcgc 90817
>gb|AF143404.1|AF143404 Drosophila melanogaster thioredoxin-like protein TXL (txl) mRNA, complete cds Length = 1087 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atcatgaccaccaagatgaa 363 |||||||||||||||||||| Sbjct: 923 atcatgaccaccaagatgaa 942
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgccgccgcgtacgcgcgcc 113 |||||||||||||||||||| Sbjct: 110320 cgccgccgcgtacgcgcgcc 110339
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcggccgacctcgccgcggc 174 |||||||||||||||||||| Sbjct: 4494898 gcggccgacctcgccgcggc 4494879
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 166 cgccgcggcctccccctccgccctgctcccgc 197 |||||| |||||| |||||||||||| ||||| Sbjct: 98965 cgccgccgcctccgcctccgccctgcccccgc 98996
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgcggccgacctcgccg 170 |||||||||||||||||||| Sbjct: 4221872 cgccgcggccgacctcgccg 4221853 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgcggccgacctcgccgcgg 173 |||||||||||||||||||| Sbjct: 2961904 cgcggccgacctcgccgcgg 2961923
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgcagtctggtgcatttctg 398 |||||||||||||||||||| Sbjct: 45426 tgcagtctggtgcatttctg 45407
>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ggcttcggtggtagaggatg 431 |||||||||||||||||||| Sbjct: 135444 ggcttcggtggtagaggatg 135425
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ccgcgccgccgcgtacgcgcgcct 114 ||||||||||||| |||||||||| Sbjct: 41651 ccgcgccgccgcgcacgcgcgcct 41628
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ccgcgccgccgcgtacgcgcgcct 114 ||||||||||||| |||||||||| Sbjct: 8950 ccgcgccgccgcgcacgcgcgcct 8927
>emb|BX640950.1|HSM807099 Homo sapiens mRNA; cDNA DKFZp686J13130 (from clone DKFZp686J13130); complete cds Length = 4534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 655 cctgctcccgctcctcctcc 636
>emb|BX640786.1|HSM806876 Homo sapiens mRNA; cDNA DKFZp686I0627 (from clone DKFZp686I0627); complete cds Length = 4507 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 640 cctgctcccgctcctcctcc 621
>emb|AJ242827.1|STE242827 Streptomyces tendae afp gene and ORF2 (partial), strain Tue901/8c Length = 2082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccgccgcggccgacctcgcc 169 |||||||||||||||||||| Sbjct: 1889 ccgccgcggccgacctcgcc 1908
>ref|XM_552801.1| Anopheles gambiae str. PEST ENSANGP00000027203 (ENSANGG00000022706), partial mRNA Length = 378 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gccgccgtcgtcggtggcgc 59 |||||||||||||||||||| Sbjct: 189 gccgccgtcgtcggtggcgc 208
>dbj|AK108984.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F04, full insert sequence Length = 913 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 acctccatgccgccgtcgtcggtggcgc 59 |||||||||||| ||||| ||||||||| Sbjct: 551 acctccatgccggcgtcgccggtggcgc 524
>dbj|AK106313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D07, full insert sequence Length = 1346 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 1034 ccatgtcgtcgtcgtcggtggcccggcaggtg 1003
>emb|AJ333470.1|HSA333470 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KI24R Length = 701 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 cgacccctccgccgcggccg 161 |||||||||||||||||||| Sbjct: 21 cgacccctccgccgcggccg 2
>dbj|AK105904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F12, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cggccgacctcgccgcggcc 175 |||||||||||||||||||| Sbjct: 419 cggccgacctcgccgcggcc 438
>dbj|AK069406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B04, full insert sequence Length = 2097 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 ccgacgacccctccgccgcggccg 161 ||||||||||||||||||| |||| Sbjct: 221 ccgacgacccctccgccgccgccg 244
>dbj|AK068274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145B01, full insert sequence Length = 1816 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 ctcaagtgcctcggcttcgcgctctacc 275 |||||| |||||||| |||||||||||| Sbjct: 1383 ctcaagagcctcggcctcgcgctctacc 1410
>gb|BC066067.1| Mus musculus RIKEN cDNA 6330442E10 gene, mRNA (cDNA clone MGC:91312 IMAGE:6851142), complete cds Length = 3880 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 207 gctcccgctcctcctccgcg 188
>emb|AL669987.1|NCB12N19 Neurospora crassa DNA linkage group II BAC clone B12N19 Length = 42273 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 cgacgacccctccgccgcggccga 162 ||||||||||||||||||| |||| Sbjct: 20895 cgacgacccctccgccgcgcccga 20872
>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete sequence Length = 272100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggcaggtggcggagattgcg 79 |||||||||||||||||||| Sbjct: 114327 ggcaggtggcggagattgcg 114308
>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete sequence Length = 284268 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atcatgaccaccaagatgaa 363 |||||||||||||||||||| Sbjct: 237546 atcatgaccaccaagatgaa 237565
>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence Length = 168482 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 127737 cctgctcccgctcctcctcc 127756
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gccgcctccgccctcaagtg 255 |||||||||||||||||||| Sbjct: 4412973 gccgcctccgccctcaagtg 4412992
>dbj|AP000806.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713C6, complete sequence Length = 120480 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 75778 cctgctcccgctcctcctcc 75759
>gb|AC005447.1|AC005447 Drosophila melanogaster, chromosome 2R, region 43E5-43E10, P1 clone DS03503, complete sequence Length = 77907 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggcaggtggcggagattgcg 79 |||||||||||||||||||| Sbjct: 28575 ggcaggtggcggagattgcg 28556
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gatgacgaggccgtcgccgc 240 |||||||||||||||||||| Sbjct: 240686 gatgacgaggccgtcgccgc 240705
>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 13530 cctcgccgcggcctccccct 13549
>gb|DQ231522.1| Zea mays molybdenum cofactor biosynthesis protein (Vp10) gene, complete cds Length = 10034 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 gcgcctcctccacctgcagc 128 |||||||||||||||||||| Sbjct: 4287 gcgcctcctccacctgcagc 4268
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 ccatgccgccgtcgtcggtggcgcggcaggtg 67 ||||| || ||||||||||||| ||||||||| Sbjct: 20170032 ccatgtcgtcgtcgtcggtggcccggcaggtg 20170001
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ccgacgacccctccgccgcggccg 161 ||||||||||||||||||| |||| Sbjct: 50182 ccgacgacccctccgccgccgccg 50159
>emb|CR749212.1| Homo sapiens mRNA; cDNA DKFZp686E1950 (from clone DKFZp686E1950) Length = 6126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctgctcccgctcctcctcc 206 |||||||||||||||||||| Sbjct: 648 cctgctcccgctcctcctcc 629
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cgcgcctcctcccgcaccgc 27 |||||||||||||||||||| Sbjct: 196717 cgcgcctcctcccgcaccgc 196736
>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135, complete sequence Length = 96988 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gccgtcgccgcctccgccct 249 |||||||||||||||||||| Sbjct: 38428 gccgtcgccgcctccgccct 38447
>gb|AC171202.1| Mus musculus BAC clone RP24-288C12 from chromosome 16, complete sequence Length = 194527 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctcgccgcggcctccccct 182 |||||||||||||||||||| Sbjct: 66241 cctcgccgcggcctccccct 66222
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aggtggcggagattgcggcg 82 |||||||||||||||||||| Sbjct: 118316 aggtggcggagattgcggcg 118297
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gctcccgctcctcctccgcg 209 |||||||||||||||||||| Sbjct: 111827 gctcccgctcctcctccgcg 111808
>dbj|AB035202.1| Streptomyces coelicolor orf3, orf1, p52, orf2, orf4, orf5 genes, partial and complete cds Length = 7114 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 150 ccgccgcggccgacctcgccgcggcctccccc 181 ||||||||||||||||||| | ||||| |||| Sbjct: 5717 ccgccgcggccgacctcgcggaggcctgcccc 5748 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,855,233 Number of Sequences: 3902068 Number of extensions: 3855233 Number of successful extensions: 103652 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97107 Number of HSP's gapped (non-prelim): 6545 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
