>FA13C_HUMAN (Q8NE31) Protein FAM13C1|
          Length = 585

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 292 SALPSQARKHPPPQNRPQGAQQPRTSDSAS 203
           S +P+   +    ++RPQG+QQP  +D AS
Sbjct: 439 SLIPTIQEEEDSDEDRPQGSQQPSLADPAS 468

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
 Frame = -2

Query: 295 HSALPSQARKHPPPQNRPQGAQQPRTSDSASXXXXXXRE-----HERDKG 161
           HS +P  A   P P  +P  AQQP +   AS       E     HER  G
Sbjct: 38  HSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPG 87

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
 Frame = -2

Query: 295 HSALPSQARKHPPPQNRPQGAQQPRTSDSASXXXXXXRE-----HERDKGDDFG*D 143
           HS +P  A   P P  +P  AQQP +   AS       E     HE+  G   G D
Sbjct: 38  HSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGGAD 93

>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2067

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   PSLSALQNPSHPPHQKPY 59
           PSL+ +Q PSHPP   P+
Sbjct: 365 PSLATVQTPSHPPPPYPF 382

>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2063

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   PSLSALQNPSHPPHQKPY 59
           PSL+ +Q PSHPP   P+
Sbjct: 361 PSLATVQTPSHPPPPYPF 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,245,228
Number of Sequences: 219361
Number of extensions: 347169
Number of successful extensions: 1310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)