>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
           component Sec8)
          Length = 1053

 Score =  179 bits (453), Expect = 3e-45
 Identities = 86/117 (73%), Positives = 101/117 (86%)
 Frame = +1

Query: 79  GIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 258
           GIF+GLP+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I  LKEQSD++
Sbjct: 2   GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61

Query: 259 EDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEMAEAKKLLGRKNQHL 429
           E+VVDEVVHAYH GFNKAIQNYS ILRLFSES E I  LK ++AEAK+ LG +N+ L
Sbjct: 62  EEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQL 118

>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8|
          Length = 1111

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 202 TSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKG 381
           +S  R  E +  ++    +++ +  +VH +H GFN +I  +  I      S + +  LK 
Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174

Query: 382 EMAEAKKLLGRKNQHL 429
            +A +K  L   N  L
Sbjct: 175 SLAASKTALCTTNPEL 190

>OST3A_HUMAN (Q9Y663) Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 (EC|
           2.8.2.30) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 3A1) (Heparan sulfate
           3-O-sulfotransferase 3A1) (h3-OST-3A)
          Length = 406

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = +3

Query: 300 LQQGHTELLPYPAAVQRVRR------EHHRPQGGDGRGQKAAWEEES 422
           L  G  EL  +PAA QR R          RP      G++AAWEEES
Sbjct: 71  LAGGPRELAVWPAAAQRKRLLQLPQWRRRRPPAPRDDGEEAAWEEES 117

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039

>SYFA_HALSA (Q9HMK4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 502

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 336 AAVQRVRREHHRPQGGDGRGQKAAWEEESA 425
           A V+RV R H    G DG G  + W+E+ A
Sbjct: 300 ALVERVERAHREGAGDDGDGYHSPWDEDFA 329

>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)|
          Length = 489

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
 Frame = +1

Query: 25  RLSPGPASPSVTMSRHRRGIFDGLP-------IPPD---KSYLKEGLSRIDEGWAAARFD 174
           ++SP P  PS++M R    I+  LP       + P    KS     +S++      + F 
Sbjct: 83  KVSPRPTPPSLSMRRSEASIYT-LPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFS 141

Query: 175 SLPHV--VHILTSKDRDGEIQFLKEQSDLI 258
             PH+  VH L+ K +D +++ ++ +S  I
Sbjct: 142 EKPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171

>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947

>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947

>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036

>EXOC4_RAT (Q62824) Exocyst complex component 4 (Exocyst complex component|
           Sec8) (rSec8)
          Length = 975

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +1

Query: 208 KDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEM 387
           +DR+ E   L+E  +  +  +DE++  ++     AI+ Y  I    + S   I  +K  +
Sbjct: 38  EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97

Query: 388 AEAKKLLGRKNQHL 429
              K LL  K   L
Sbjct: 98  LSCKMLLHCKRDEL 111

>EXOC4_MOUSE (O35382) Exocyst complex component 4 (Exocyst complex component|
           Sec8)
          Length = 975

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +1

Query: 208 KDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEM 387
           +DR+ E   L+E  +  +  +DE++  ++     AI+ Y  I    + S   I  +K  +
Sbjct: 38  EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97

Query: 388 AEAKKLLGRKNQHL 429
              K LL  K   L
Sbjct: 98  LSCKMLLHCKRDEL 111

>EXOC4_HUMAN (Q96A65) Exocyst complex component 4 (Exocyst complex component|
           Sec8)
          Length = 974

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +1

Query: 208 KDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEM 387
           +DR+ E   L+E  +  +  +DE++  ++     AI+ Y  I    + S   I  +K  +
Sbjct: 38  EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97

Query: 388 AEAKKLLGRKNQHL 429
              K LL  K   L
Sbjct: 98  LSCKMLLHCKRDEL 111

>FA84A_BOVIN (Q3ZCA1) Protein FAM84A|
          Length = 297

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 91  GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L+  D     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295

>VGLC_BHV1C (P14378) Glycoprotein GIII precursor|
          Length = 521

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
 Frame = +3

Query: 3   SPVSPDLAP---LPGSRLAVGNDEPP-------PAWHLRRPPNSARQILPEGRAVADRRG 152
           +P SPD  P    PG+   VG  EPP       P  +   PP       P G   A R G
Sbjct: 57  TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116

Query: 153 MGSG 164
             SG
Sbjct: 117 RPSG 120

>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 662

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 150 LVDPRQPFLQV-RFVWRNWEAVEDATPVAAHRYRRRGGTRGEAR 22
           ++ PR  F  + RFV R+WE +ED++   A  Y  R   RG+ R
Sbjct: 59  VLSPRNTFSNLKRFVGRDWEELEDSS--LAVPYTVRANDRGQVR 100

>YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I|
          Length = 783

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
 Frame = +1

Query: 124 KEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGE-IQFLKEQSDLIEDVVDEVVHAYHHG 300
           K G S +D+G AA+R+D+      +   K+R  E ++ L+EQ + I+ V   V+      
Sbjct: 349 KLGESNVDDGMAASRYDT------VKREKERLSEHLKSLQEQYEHIQSVYKNVL------ 396

Query: 301 FNKAIQNYSHILRLFSESAESITGLKGEMAEAKKLLGRKNQ 423
               +   S+I+RL ++ +E+      E+    ++L  K Q
Sbjct: 397 ----LDRESYIMRLGNKISEN-----NELLNENRVLKEKLQ 428

>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)|
          Length = 595

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 112 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKEQSDLIEDVVD 273
           ++Y+K G +R    W+    + L +V+H +    ++   DGE   +K+ S  IED  D
Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436

>PPK_STRGR (Q9EUS8) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid|
           kinase) (ATP-polyphosphate phosphotransferase)
           (Fragment)
          Length = 703

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = -3

Query: 183 RQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAVEDATPVAAHRYRRR 46
           RQRV P   P  VDP  PF  +  +  N  AV    PV+ HR+  R
Sbjct: 148 RQRVFPVLTPLAVDPAHPFPYISGLSLNL-AVVVRNPVSGHRHFAR 192

>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)|
          Length = 1220

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -1

Query: 191 TTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRLIVTDGEAGPG 33
           TT  S  N  A   S    +P    +  G +GRP + P+ W + +   + GPG
Sbjct: 813 TTTSSYDN--AIFNSQFNKAPGSDDEEGGNLGRPIENPKTWVISIEVEDTGPG 863

>CD123_YEAST (Q05791) Cell division cycle protein 123|
          Length = 360

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 285
           HI+ +  RD     +L E SD  +D++DE+VH
Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237

>XYLA_BACHD (Q9K993) Xylose isomerase (EC 5.3.1.5)|
          Length = 440

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 253 LIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEMAEAKKLLGRKNQHL 429
           ++EDV+D    +Y  G  + I N    L+     A S+  +K    + +++    NQ+L
Sbjct: 376 VLEDVIDNRYKSYQSGIGQKIANNDTNLKELEAYALSLGEIKHSSGQQERIKATLNQYL 434

>GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 165

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
 Frame = +1

Query: 4   AQSVQISRLSPGPASPSVTMSRHRRGIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLP 183
           A ++++S  S    SP+ ++SR    + DGL   P   ++K   S    G      D L 
Sbjct: 11  ANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLG 70

Query: 184 HVVHI--------LTSKDRDGEIQFLKEQSDLIEDVVDEVV 282
            VV +        +T     G ++ +K  SD+   +  EV+
Sbjct: 71  EVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVI 111

>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -2

Query: 151  PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 20
            PRRS    P+G +   E GG R C  G G     +  P++  D G  A+
Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565

>DCUP_CHLTR (O84752) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 336

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
 Frame = +1

Query: 25  RLSPGPASPSVTMSRHRRGIFDGLPIPPDKSYLKEGLSRIDE-------GWAAARFDSLP 183
           R +PGP    V+ S H   IF   P     S+L E + ++ +        +AA+ F    
Sbjct: 86  RFAPGP---EVSYSPHEPLIFTKDP-QETFSFLLEAIQQLTKRLTVPLIAFAASPFTLAS 141

Query: 184 HVVHILTSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESA 357
           +++    S+D    I FL +  D  + ++DE+           +Q  +  ++LF  S+
Sbjct: 142 YLIEGGASRDYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQAGAAAIQLFESSS 199

>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)|
          Length = 292

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 91  GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L   +     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290

>FLIF_ECOLI (P25798) Flagellar M-ring protein|
          Length = 552

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +1

Query: 52  SVTMSRHRRGIFDGLPIPPDKSYLK--EGLSRIDEGWAAARFDSLPHVVHILTSKDRD-G 222
           SV +  + + + DG P+P     +K  E L+R   G++  R DSL  V     S D   G
Sbjct: 378 SVAVVVNYKTLPDGKPLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGG 437

Query: 223 EIQFLKEQS 249
           E+ F ++Q+
Sbjct: 438 ELPFWQQQA 446


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,211,499
Number of Sequences: 219361
Number of extensions: 1250120
Number of successful extensions: 5058
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5052
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)