ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
2dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
3dbj|AK073825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
4ref|XM_744563.1| Aspergillus fumigatus Af293 salicylate hydroxyl... 44 0.40
5ref|XM_450747.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
6ref|NM_190656.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
7gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.6
8ref|XM_588014.2| PREDICTED: Bos taurus similar to junction-media... 42 1.6
9gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
10gb|AC026202.7| Homo sapiens chromosome 3 clone RP11-572B2 map 3p... 42 1.6
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13gb|AC026203.3|AC026203 Homo sapiens chromosome 3 clone RP11-586C... 42 1.6
14gb|AC026164.5|AC026164 Homo sapiens chromosome 3 clone RP11-116K... 42 1.6
15dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
16dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.6
20gb|DQ214103.1| Taeniopygia guttata clone 0061P0019G02 RIKEN cDNA... 40 6.3
21ref|XM_450308.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
22gb|AY140657.1| Carabus solieri microsatellite 825 sequence 40 6.3
23ref|XM_955003.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
24ref|XM_325690.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
26gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
30gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
31dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
32dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.3
33dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
34dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
35dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
37dbj|AK105781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
38dbj|AK100361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
39gb|AY620521.1| Saguinus labiatus Alu insertion locus Aotus_F9_Sa... 40 6.3
40dbj|AK066614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
41dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge... 40 6.3 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                            
Query: 380      tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaaca-gatc 438
                ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||| ||| 
Sbjct: 21951910 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 21951851

                                       
Query: 439      gccgacagggacacctaccagat 461
                || ||||||||||||||||||||
Sbjct: 21951850 gcagacagggacacctaccagat 21951828



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 106      gcgcgccaccgccgccgctgc 126
                |||||||||||||||||||||
Sbjct: 12574466 gcgcgccaccgccgccgctgc 12574446



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     cgcgccaccgccgccgctgc 126
               ||||||||||||||||||||
Sbjct: 4022488 cgcgccaccgccgccgctgc 4022469
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>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1065_E04
          Length = 115865

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                         
Query: 380   tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaaca-gatc 438
             ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||| ||| 
Sbjct: 82627 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 82568

                                    
Query: 439   gccgacagggacacctaccagat 461
             || ||||||||||||||||||||
Sbjct: 82567 gcagacagggacacctaccagat 82545
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>dbj|AK073825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068E01, full
           insert sequence
          Length = 3036

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 380 tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaaca-gatc 438
           ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||| ||| 
Sbjct: 282 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 341

                                  
Query: 439 gccgacagggacacctaccagat 461
           || ||||||||||||||||||||
Sbjct: 342 gcagacagggacacctaccagat 364
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>ref|XM_744563.1| Aspergillus fumigatus Af293 salicylate hydroxylase (Afu2g05260)
            partial mRNA
          Length = 1323

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 294  tctgcaccagccactgagaccg 315
            ||||||||||||||||||||||
Sbjct: 1135 tctgcaccagccactgagaccg 1114
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>ref|XM_450747.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1992

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 gcgcgccaccgccgccgctgc 126
           |||||||||||||||||||||
Sbjct: 966 gcgcgccaccgccgccgctgc 946
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>ref|NM_190656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2139

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 325  agctcgtcgccgcaccgcttc 345
            |||||||||||||||||||||
Sbjct: 1938 agctcgtcgccgcaccgcttc 1958
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 106     gcgcgccaccgccgccgctgc 126
               |||||||||||||||||||||
Sbjct: 1132047 gcgcgccaccgccgccgctgc 1132027
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>ref|XM_588014.2| PREDICTED: Bos taurus similar to junction-mediating and regulatory
           protein (LOC510810), mRNA
          Length = 3110

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 107 cgcgccaccgccgccgctgcg 127
           |||||||||||||||||||||
Sbjct: 169 cgcgccaccgccgccgctgcg 149
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>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0008E07, complete sequence
          Length = 146679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   cgcgccaccgccgccgctgcg 127
             |||||||||||||||||||||
Sbjct: 66605 cgcgccaccgccgccgctgcg 66585
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>gb|AC026202.7| Homo sapiens chromosome 3 clone RP11-572B2 map 3p, complete sequence
          Length = 204248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    tgcttgtccccaggcaggcag 49
             |||||||||||||||||||||
Sbjct: 80313 tgcttgtccccaggcaggcag 80333
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      cgcgccaccgccgccgctgcg 127
                |||||||||||||||||||||
Sbjct: 12299127 cgcgccaccgccgccgctgcg 12299107
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 325      agctcgtcgccgcaccgcttc 345
                |||||||||||||||||||||
Sbjct: 36790865 agctcgtcgccgcaccgcttc 36790885
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>gb|AC026203.3|AC026203 Homo sapiens chromosome 3 clone RP11-586C2 map 3p, complete sequence
          Length = 181164

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    tgcttgtccccaggcaggcag 49
             |||||||||||||||||||||
Sbjct: 80866 tgcttgtccccaggcaggcag 80886
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>gb|AC026164.5|AC026164 Homo sapiens chromosome 3 clone RP11-116K5 map 3p, complete sequence
          Length = 155769

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    tgcttgtccccaggcaggcag 49
             |||||||||||||||||||||
Sbjct: 37529 tgcttgtccccaggcaggcag 37549
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>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1096A10
          Length = 150976

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 325  agctcgtcgccgcaccgcttc 345
            |||||||||||||||||||||
Sbjct: 6443 agctcgtcgccgcaccgcttc 6463
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0529E05
          Length = 134982

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    agctcgtcgccgcaccgcttc 345
              |||||||||||||||||||||
Sbjct: 117180 agctcgtcgccgcaccgcttc 117200
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   gcgcgccaccgccgccgctgc 126
             |||||||||||||||||||||
Sbjct: 40404 gcgcgccaccgccgccgctgc 40384
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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   gcgcgccaccgccgccgctgc 126
             |||||||||||||||||||||
Sbjct: 89793 gcgcgccaccgccgccgctgc 89773
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 362     tccagcacggccgccccgtcc 382
               |||||||||||||||||||||
Sbjct: 3254741 tccagcacggccgccccgtcc 3254761
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>gb|DQ214103.1| Taeniopygia guttata clone 0061P0019G02 RIKEN cDNA 2610002I17
           gene-like mRNA, complete sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ggatgaagtccagcacggcc 373
           ||||||||||||||||||||
Sbjct: 480 ggatgaagtccagcacggcc 461
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>ref|XM_450308.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2553

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 cgcgccaccgccgccgctgc 126
           ||||||||||||||||||||
Sbjct: 330 cgcgccaccgccgccgctgc 349
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>gb|AY140657.1| Carabus solieri microsatellite 825 sequence
          Length = 378

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 cgccaccgccgccgctgcga 128
           ||||||||||||||||||||
Sbjct: 288 cgccaccgccgccgctgcga 307
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>ref|XM_955003.1| Neurospora crassa OR74A hypothetical protein (NCU05836.1) partial
           mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 tcgagctcaagcacaagctc 418
           ||||||||||||||||||||
Sbjct: 233 tcgagctcaagcacaagctc 252
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>ref|XM_325690.1| Neurospora crassa OR74A hypothetical protein (NCU05836.1) partial
           mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 tcgagctcaagcacaagctc 418
           ||||||||||||||||||||
Sbjct: 233 tcgagctcaagcacaagctc 252
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gagcgcgccaccgccgccgc 123
               ||||||||||||||||||||
Sbjct: 6992682 gagcgcgccaccgccgccgc 6992701
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>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gagcgcgccaccgccgccgc 123
             ||||||||||||||||||||
Sbjct: 89683 gagcgcgccaccgccgccgc 89664
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 334      ccgcaccgcttcttccgccg 353
                ||||||||||||||||||||
Sbjct: 26004167 ccgcaccgcttcttccgccg 26004148
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gagcgcgccaccgccgccgc 123
               ||||||||||||||||||||
Sbjct: 6990577 gagcgcgccaccgccgccgc 6990596
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 54      cgccggcggagagcgagcgg 73
               ||||||||||||||||||||
Sbjct: 4754787 cgccggcggagagcgagcgg 4754806



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 369     cggccgccccgtccaagggcaagg 392
               ||||||||||| ||||||||||||
Sbjct: 1894999 cggccgccccggccaagggcaagg 1895022
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
              complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    gagcgcgccaccgccgccgc 123
              ||||||||||||||||||||
Sbjct: 159279 gagcgcgccaccgccgccgc 159298
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>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBb0066C12
          Length = 168874

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  cgcgccaccgccgccgctgc 126
            ||||||||||||||||||||
Sbjct: 5969 cgcgccaccgccgccgctgc 5950
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     cgcgccaccgccgccgctgc 126
               ||||||||||||||||||||
Sbjct: 3598296 cgcgccaccgccgccgctgc 3598277
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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0545E05
          Length = 163229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    gagcgcgccaccgccgccgc 123
              ||||||||||||||||||||
Sbjct: 134271 gagcgcgccaccgccgccgc 134252
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ccgcaccgcttcttccgccg 353
             ||||||||||||||||||||
Sbjct: 42025 ccgcaccgcttcttccgccg 42006
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>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0574F11
          Length = 159891

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    cgcgccaccgccgccgctgc 126
              ||||||||||||||||||||
Sbjct: 154000 cgcgccaccgccgccgctgc 153981
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>dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C08, full
           insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gagcgcgccaccgccgccgc 123
           ||||||||||||||||||||
Sbjct: 242 gagcgcgccaccgccgccgc 261
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>dbj|AK105781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G04, full
           insert sequence
          Length = 1415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 gagcgcgccaccgccgccgc 123
           ||||||||||||||||||||
Sbjct: 730 gagcgcgccaccgccgccgc 711
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>dbj|AK100361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083M02, full
           insert sequence
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 gagcgcgccaccgccgccgc 123
           ||||||||||||||||||||
Sbjct: 720 gagcgcgccaccgccgccgc 701
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>gb|AY620521.1| Saguinus labiatus Alu insertion locus Aotus_F9_Saguinus_16 sequence
          Length = 247

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 cctccagccctcacccccat 268
           ||||||||||||||||||||
Sbjct: 75  cctccagccctcacccccat 94
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>dbj|AK066614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074N01, full
           insert sequence
          Length = 3250

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 gagcgcgccaccgccgccgc 123
           ||||||||||||||||||||
Sbjct: 366 gagcgcgccaccgccgccgc 347
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>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gccgccgctgcgaggcgagg 135
              ||||||||||||||||||||
Sbjct: 232186 gccgccgctgcgaggcgagg 232167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,251,896
Number of Sequences: 3902068
Number of extensions: 3251896
Number of successful extensions: 85993
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84788
Number of HSP's gapped (non-prelim): 1205
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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