ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl07f01 |
|---|---|
| Clone Library Name | barley_pub |
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 35.4 bits (80), Expect = 0.074 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = +3 Query: 264 ASDGMVIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGEWAGVKCARGKVVALQLP 443 +S +V ++ L + +++L +P LS WN + A +W GV C G+V +L LP Sbjct: 16 SSSAIVDLSSETTSLISFKRSLENP-SLLSSWNVSS-SASHCDWVGVTCLLGRVNSLSLP 73 Query: 444 FKGLAGAL 467 L G + Sbjct: 74 SLSLRGQI 81
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 33.9 bits (76), Expect = 0.22 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMA---CSPC 299 +++PA G S A +PA +P P P P G S R + SP Sbjct: 23 QASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRASPAQASPA 82 Query: 298 RSACAITMPSDAWPRAGDAECSRRTSSDSASVTPLLLLHTPIGAI 164 R++ A+ S + +G + +R S ++ L+ TP+GA+ Sbjct: 83 RASPALASLSRS--SSGRSSSARSASVTTSPTRVYLVRATPVGAV 125
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 33.9 bits (76), Expect = 0.22 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = -3 Query: 466 SAPARPLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSAC 287 +AP A P A PA +P Q PRP P P PR + +A P A Sbjct: 95 AAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTP-GPKPAPRPAPAAPEFTAPPAAPAA 153 Query: 286 AIT-MPSDAWPRAGDA 242 T P+ + P+ G A Sbjct: 154 PSTPAPAPSGPKPGGA 169
>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)| (EBNA-6) (EBNA-3C) (EBNA-4B) Length = 992 Score = 33.5 bits (75), Expect = 0.28 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 8/58 (13%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPA-------HSPEQAPRPVPFHPLRNP-RGSTSAC 320 +S P RP S+ T+ AH TP H P P+PVP P P R AC Sbjct: 446 QSTPERPGPSEQSSVTVEPAHPTPVEMPMVILHQPPPVPKPVPVKPTPPPSRRRRGAC 503
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 32.7 bits (73), Expect = 0.48 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = -3 Query: 466 SAPAR-PLNGSCSATTLPRA--HLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMA--CSP 302 S+PAR P S + T+ RA +PA +P QA P R P ++ A SP Sbjct: 9 SSPARTPPQASPARTSPARAPPQASPARTPPQAS------PARTPPQASPARAPPPQASP 62 Query: 301 CRSACAITMPSDAWPRAGDAECSRRTSSDSASVTPLLLLHTPIGAI 164 R++ A PS + +G + +R S+ S+ L+ TP+GA+ Sbjct: 63 ARASPARAPPSRS--SSGRSSSARSASTTSSPTRVYLVRATPVGAV 106
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 32.3 bits (72), Expect = 0.63 Identities = 22/61 (36%), Positives = 27/61 (44%) Frame = -3 Query: 370 PVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAGDAECSRRTSSDSASVTPLL 191 P P LR+ R S M SP A P A+PRAG + SR+ S A + L Sbjct: 592 PEPELSLRSSRDSLEPSSMEASPEMHPGARLSPQPAFPRAGSSGLSRKDSLTKAQLYGTL 651 Query: 190 L 188 L Sbjct: 652 L 652
>ENV_FLVC6 (P21443) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 668 Score = 32.0 bits (71), Expect = 0.82 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 16/112 (14%) Frame = -3 Query: 442 GSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD- 266 G C AT +P+ H + ++ R H L P G+ AC +PC S + SD Sbjct: 379 GLCIAT-VPKTHQALCNKTQKGHRGT--HYLVAPNGTYWACNTGLTPCISMAVLNWTSDF 435 Query: 265 -----AWPRA---------GDAECSRRTSSDSASVTPLLLL-HTPIGAILRN 155 WPR E R D S+T L+L +G + RN Sbjct: 436 CVLTELWPRITYHEPEYIYSHFENKPRFKRDPISLTVALMLGGITVGGMARN 487
>SIN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1282 Score = 32.0 bits (71), Expect = 0.82 Identities = 20/91 (21%), Positives = 38/91 (41%) Frame = -3 Query: 445 NGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD 266 N + TT + H P H + P+P P HP P ++ +P +A ++ PS Sbjct: 197 NDMVNVTTPGQVHQIPTHGIQPQPQPPPQHP-SQPSSQSAPTPAQPAPQPTAAKVSKPSQ 255 Query: 265 AWPRAGDAECSRRTSSDSASVTPLLLLHTPI 173 ++ + ++ +P + HTP+ Sbjct: 256 LQAHTPASQQTPPLPPYASPRSPPVQPHTPV 286
>Y1786_VIBCH (Q9KR57) Putative radC-like protein VC1786| Length = 158 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -2 Query: 356 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVGRLAAS 252 P+Q R+ QRL D L + +R+ DH VG+ + S Sbjct: 117 PSQADRRITQRLKDALSLVDIRVLDHVVVGKSSVS 151
>PKNJ_MYCTU (P65732) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/82 (29%), Positives = 32/82 (39%) Frame = -3 Query: 442 GSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDA 263 GS +A P H P P P+P P R RG + + + A+TM S Sbjct: 313 GSVTALATPPGHGWPPGLP-----PLPRRPRRYRRGVAAVAAVMVVAAAAVTAVTMTSHQ 367 Query: 262 WPRAGDAECSRRTSSDSASVTP 197 PR + S S+S TP Sbjct: 368 -PRTATPPSAAALSPTSSSTTP 388
>PKNJ_MYCBO (P65733) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/82 (29%), Positives = 32/82 (39%) Frame = -3 Query: 442 GSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDA 263 GS +A P H P P P+P P R RG + + + A+TM S Sbjct: 313 GSVTALATPPGHGWPPGLP-----PLPRRPRRYRRGVAAVAAVMVVAAAAVTAVTMTSHQ 367 Query: 262 WPRAGDAECSRRTSSDSASVTP 197 PR + S S+S TP Sbjct: 368 -PRTATPPSAAALSPTSSSTTP 388
>KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go related gene potassium channel 1) (H-ERG) (Erg1) (Ether-a-go-go related protein 1) (Eag-related protein 1) (eag homo Length = 1159 Score = 30.8 bits (68), Expect = 1.8 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = -3 Query: 415 RAHLTPAHSPEQAPRPVPF---HPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAGD 245 RA + P P AP +P H L NP S S+C +A + R +CA + + A D Sbjct: 232 RALVGPGSPPRSAPGQLPSPRAHSL-NPDASGSSCSLARTRSRESCASVRRASS---ADD 287 Query: 244 AECSRRTSSDSASVTPLLLLHTPIGAI--LRNG 152 E R A V P H GA+ LR+G Sbjct: 288 IEAMR------AGVLPPPPRHASTGAMHPLRSG 314
>ENV_FSVSM (P21445) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 645 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+PR H + +Q H L P G+ AC +PC S + SD Sbjct: 367 TVPRTHQALCNKTQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 424 Query: 262 WPR 254 WPR Sbjct: 425 WPR 427
>POLN_HEVBU (P29324) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA| polymerase/Helicase) Length = 1693 Score = 25.8 bits (55), Expect(2) = 2.3 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -3 Query: 466 SAPARPLNGSCSATTLPRAHLTP---AHSPEQAPRPVP 362 S+PARP G S ++P TP A P AP P P Sbjct: 712 SSPARPDLGFMSEPSIPSRAATPTLAAPLPPPAPDPSP 749 Score = 23.1 bits (48), Expect(2) = 2.3 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 255 EPATPSAAGGPAVTARA*HH 196 EPA+ + AG PA+T + H Sbjct: 758 EPASGATAGAPAITHQTARH 777
>TF3C1_HUMAN (Q12789) General transcription factor 3C polypeptide 1 (Transcription| factor IIIC-alpha subunit) (TF3C-alpha) (TFIIIC 220 kDa subunit) (TFIIIC220) (TFIIIC box B-binding subunit) Length = 2109 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPAHSPEQAPR 371 E ARPL GS S + P P+HSP R Sbjct: 1830 EDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKR 1862
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 30.0 bits (66), Expect = 3.1 Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 12/93 (12%) Frame = -3 Query: 463 APARPLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCR---- 296 A RP +G+ +A+T P H P A RP P P P ++ C R Sbjct: 96 ASGRP-HGNTTASTAPPRHPRPRRPGGPALRPTP-RPCAGPAPPPASRDCRCRRPRRWPR 153 Query: 295 --------SACAITMPSDAWPRAGDAECSRRTS 221 AC + AW G CS RTS Sbjct: 154 AGRRGRRAGACKPSCAGAAWSARGAPLCSYRTS 186
>CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCCVIA1) (Phantom| protein) (Dmphm) Length = 574 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/69 (33%), Positives = 28/69 (40%) Frame = +2 Query: 59 VRGYIHRNCIASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPPAA 238 VR + R+ + R L L G GG G C +E W HAR T A Sbjct: 102 VRDFFRRDVMTGRAPLYLTHGIMGGFGII-----------CAQEDIWRHARRETIDWLKA 150 Query: 239 LGVAGSRPG 265 LG+ RPG Sbjct: 151 LGMT-RRPG 158
>ENV_FLVLB (P11261) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] (Fragment) Length = 662 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Frame = -3 Query: 442 GSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD- 266 GSC T +P+ H ++ + H L P G+ AC +PC S + SD Sbjct: 379 GSCIGT-VPKTHQALCKKTQKGHKGT--HYLAAPSGTYWACNTGLTPCISMAVLNWTSDF 435 Query: 265 -----AWPR 254 WPR Sbjct: 436 CVLIELWPR 444
>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) Length = 1636 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHP--------LRNPRGSTSACRM 314 ++AP S + + P HL P+ +P P PVP P LR RG+ +A + Sbjct: 1063 QAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLR--RGAAAADLL 1120 Query: 313 ACSP 302 + SP Sbjct: 1121 SSSP 1124
>CITE4_RAT (Q99MA0) Cbp/p300-interacting transactivator 4 (MSG1-related| protein 2) (MRG-2) Length = 179 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 267 TPGREPATPSAAGGPA 220 +PGR PA PSAAGGP+ Sbjct: 85 SPGRMPAPPSAAGGPS 100
>POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA| polymerase/Helicase) Length = 1693 Score = 25.0 bits (53), Expect(2) = 3.8 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -3 Query: 466 SAPARPLNGSCSATTLPRAHLTPAHS---PEQAPRPVP 362 S+PARP G S ++P TP + P AP P P Sbjct: 712 SSPARPDLGLMSEPSIPSRAATPTLAVLLPPPAPDPPP 749 Score = 23.1 bits (48), Expect(2) = 3.8 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 255 EPATPSAAGGPAVTARA*HH 196 EPA+ + AG PA+T + H Sbjct: 758 EPASGATAGAPAITHQTARH 777
>HIP_PARSP (P00264) High-potential iron-sulfur protein (HiPIP)| Length = 71 Score = 29.6 bits (65), Expect = 4.1 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 258 GQASDGMVIAQADLQGLQAIRQALVDPRGFLSGW 359 G+ D + QAD QG Q Q V+P G+ W Sbjct: 34 GEQCDNCMFFQADSQGCQLFPQNSVEPAGWCQSW 67
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Frame = +3 Query: 264 ASDGMVIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGEWAGVKC---ARGKVVAL 434 +S+ ++ L+A+R + GW + W G+ C G+V+ L Sbjct: 22 SSESQTTSRCHPHDLEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRL 81 Query: 435 QLPFKGLAGALS 470 +L K L+G LS Sbjct: 82 ELGNKKLSGKLS 93
>ENV_FLVGL (P08359) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 642 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H + +Q H L P G+ AC +PC S + SD Sbjct: 364 TVPKTHQALCNKTQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 421 Query: 262 WPR 254 WPR Sbjct: 422 WPR 424
>ENV_FSVGA (P03391) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E; R protein] Length = 662 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H + +Q H L P G+ AC +PC S + SD Sbjct: 384 TVPKTHQALCNETQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 441 Query: 262 WPR 254 WPR Sbjct: 442 WPR 444
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 279 VIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGEWAGVKC-ARGKVVALQLPFKGL 455 V A+ L A++ +L DP L W+ T + C+ W V C + V + L L Sbjct: 23 VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCT--WFHVTCNSDNSVTRVDLGNANL 80 Query: 456 AGAL 467 +G L Sbjct: 81 SGQL 84
>MDCB_PSEAE (Q9I6S9) Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A| synthase (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 293 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/48 (39%), Positives = 21/48 (43%) Frame = +2 Query: 89 ASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPP 232 A R+AL DP A+ G YG G EE C RAV G P Sbjct: 139 AGRIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVRHGLP 186
>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1273 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/91 (20%), Positives = 36/91 (39%) Frame = -3 Query: 445 NGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD 266 N + TT + H P H + P+P P HP P ++ +P ++ PS Sbjct: 197 NDMVNVTTPGQVHQIPTHGIQPQPQPPPQHP-SQPSAQSAPAPAQPAPQPPPAKVSKPSQ 255 Query: 265 AWPRAGDAECSRRTSSDSASVTPLLLLHTPI 173 ++ + ++ +P + HTP+ Sbjct: 256 LQAHTPASQQTPPLPPYASPRSPPVQPHTPV 286
>ENV_FLVCA (Q02076) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] (Fragment) Length = 410 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H + +Q H L P G+ AC +PC S + SD Sbjct: 324 TVPKTHQALCNETQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 381 Query: 262 WPR 254 WPR Sbjct: 382 WPR 384
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.6 bits (65), Expect = 4.1 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Frame = -3 Query: 460 PARPLNGSCSATTLPRAHLTPA---HSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSA 290 P L+ S S + P H P SP P P P S S+C + S C SA Sbjct: 225 PRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRTP-PPPSSSASSCSSSASSCSSA 283 Query: 289 CAITMPSDA 263 A + PS A Sbjct: 284 SAASTPSGA 292
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -3 Query: 391 SPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAGDAECSRRTSSDS 212 SP+ AP P H ST+ MA + AC T + + +G + S T + Sbjct: 8 SPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTTTTS--TSGASAASSPTRDEM 65 Query: 211 ASVTPLLLLH---TPIGA 167 + V P+ LH P+G+ Sbjct: 66 SLVVPISPLHIKQEPLGS 83
>KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (r-ERG) (RERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1163 Score = 29.6 bits (65), Expect = 4.1 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Frame = -3 Query: 415 RAHLTPAHSPEQA----PRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAG 248 RA + PA + A P P P NP S S+C +A + R +CA + + A Sbjct: 232 RALVGPASASPVASIPGPHPSPRAQSLNPDASGSSCSLARTRSRESCASVRRASS---AD 288 Query: 247 DAECSRRTSSDSASVTPLLLLHTPIGAI--LRNG 152 D E R A PL H GA+ LR+G Sbjct: 289 DIEAMR------AGALPLPPRHASTGAMHPLRSG 316
>ENV_FLVCS (Q02077) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] (Fragment) Length = 436 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H + +Q H L P G+ AC +PC S + SD Sbjct: 334 TVPKTHQALCNKTQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 391 Query: 262 WPR 254 WPR Sbjct: 392 WPR 394
>MTB_SALAL (P68502) Metallothionein B (MT-B)| Length = 60 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -3 Query: 346 NPRGSTSACRMACSPCRSACAITMPSDAWPRAGDAECSRRTSSDS 212 N GS AC+ C+ +C PSD A C +T S Sbjct: 13 NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57
>MTB_ONCMY (P68501) Metallothionein B (MT-B)| Length = 60 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -3 Query: 346 NPRGSTSACRMACSPCRSACAITMPSDAWPRAGDAECSRRTSSDS 212 N GS AC+ C+ +C PSD A C +T S Sbjct: 13 NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57
>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1| Length = 859 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 418 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSA 290 P+ P P+Q P P + P RNP G++S + + P SA Sbjct: 701 PQQPPPPQPPPQQPPPPPSYSPARNPPGASSYNKNSNIPGSSA 743
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Frame = -3 Query: 460 PARPLNGSCSATTLPRAHLTPA---HSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSA 290 P L+ S S + P H P SP P P S S+C + S C SA Sbjct: 250 PRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSASSCSSSASSCSSA 309 Query: 289 CAITMPSDA 263 A + PS A Sbjct: 310 SAASTPSGA 318
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 333 DPRGFLSGWNGTGLGACSGEWAGVKCARGKVVALQLPFKGLAGALS 470 DP LS W+ C +++GV C G+V + L GL+G +S Sbjct: 53 DPNNILSNWSPRK-SPC--QFSGVTCLGGRVTEINLSGSGLSGIVS 95
>HXB13_HUMAN (Q92826) Homeobox protein Hox-B13| Length = 284 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = -3 Query: 451 PLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMP 272 PL+ SA + H P +P PVP+ S R + PC A + Sbjct: 50 PLDLPGSAEPPKQCHPCPGVPQGTSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAY 109 Query: 271 SDAWPRAGDAECSRRT 224 P AG+ SR T Sbjct: 110 PAETPTAGEEYPSRPT 125
>JDP_DROME (Q9TVP3) J domain-containing protein (dJDP)| Length = 195 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 285 AQADLQGLQAIRQALVDP--RGFLSGWNGTGLGACSGEWAGVKCARGKV 425 A+A Q L+ ++ L DP R W +G+ +W G+K G+V Sbjct: 55 AEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMKEHVGQV 103
>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3| Length = 1620 Score = 25.0 bits (53), Expect(2) = 6.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 418 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTS 326 P AH TP ++ + +P+P P PR S S Sbjct: 1446 PLAHPTPENAAGSSEQPLPPGPSWGPRPSLS 1476 Score = 22.3 bits (46), Expect(2) = 6.2 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 Query: 279 PCRRTPGREPATPSAAGGP 223 P R PG PA+P+ GP Sbjct: 1490 PPPRLPGPPPASPAPTEGP 1508
>PACC_YEAST (P33400) pH-response transcription factor pacC/RIM101 (pH-response| regulator protein RIM101) (Regulator of IME2 protein 1) Length = 625 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -3 Query: 337 GSTSACRMACSPCRSACAITMPSDAWPRAGDAECSRRTSSDSASVTPLLLLHTPIG 170 GSTS+ +C P S + P A + +SSDS+S +PL H P G Sbjct: 78 GSTSS---SCLPYHSTSHLNTPPYDLLGASAVSPTTSSSSDSSSSSPLAQAHNPAG 130
>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein p12E; Spike protein p15E] Length = 640 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 15/68 (22%) Frame = -3 Query: 343 PRGSTSACRMACSPCRSACAITMPSD------AWPRA---------GDAECSRRTSSDSA 209 P G+T AC +PC SA + +D WPR E S R + Sbjct: 387 PAGTTWACNTGLTPCLSATVLNRTTDYCVLVELWPRVTYHPPSYVYSQFEKSYRHKREPV 446 Query: 208 SVTPLLLL 185 S+T LLL Sbjct: 447 SLTLALLL 454
>HXB3_CHICK (P23682) Homeobox protein Hox-B3 (Chox-2.7)| Length = 399 Score = 28.9 bits (63), Expect = 6.9 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRN----PRGSTSACRMACSP 302 + A ++ LNGSC +LP+ H P P +P P P + P GS R+ + Sbjct: 58 QHAKSKDLNGSCMRPSLPQEHHPP---PTVSPPPNPTTNSTSSNSIPSGSAKVPRVKPTS 114 Query: 301 CRSACAITMPSDAWPRAGDAECSRRTSSDS 212 ++ ++T W + +++SS S Sbjct: 115 VQTP-SLTKQIFPWMKESRQNSKQKSSSPS 143
>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid| receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A) Length = 1513 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRAHLTPA---HSPEQAPRPVPFHPLR 347 E ARP + S A+T+P TP SP Q+P P P P++ Sbjct: 1443 EPPGARPSSPSAVASTVPFLTSTPVTSQPSPPQSPPPTPQSPMQ 1486
>RHPN1_HUMAN (Q8TCX5) Rhophilin-1 (GTP-Rho-binding protein 1)| Length = 695 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -3 Query: 403 TPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWP 257 TPA S +PRP+ + +G T C C+P + A ++ WP Sbjct: 648 TPA-STWASPRPLLNWSRKAQQGKTGGCPQPCAPVKPAPPSSLKHPGWP 695
>ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E; R protein] Length = 675 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 15/68 (22%) Frame = -3 Query: 343 PRGSTSACRMACSPCRSACAITMPSD------AWPRA---------GDAECSRRTSSDSA 209 P G+T AC +PC SA + +D WPR E S R + Sbjct: 423 PTGTTWACNTGLTPCLSATVLNRTTDYCVLVELWPRVTYHPPSYVYSQFEKSYRHKREPV 482 Query: 208 SVTPLLLL 185 S+T LLL Sbjct: 483 SLTLALLL 490
>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin| receptor 6) (ST-B17) Length = 436 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/63 (33%), Positives = 23/63 (36%) Frame = -3 Query: 421 LPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAGDA 242 LP H P H P A P P PL SAC C I P PRA + Sbjct: 335 LPCVHCPPEHRP--ALPPPPCGPLTAVPDQASACSRCCLCLCRQTQIQTPLQGAPRACSS 392 Query: 241 ECS 233 + S Sbjct: 393 QPS 395
>SYFA_CAUCR (Q9A9E4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 357 Score = 28.9 bits (63), Expect = 6.9 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Frame = +3 Query: 279 VIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGE-----WAGVKCARGKV 425 V A +DLQ L A+R A V G +SG T LGA S E A + R KV Sbjct: 15 VAAASDLQALDAVRVAAVGKTGSISGLLKT-LGAMSPEERKTQGAAINALRDKV 67
>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein) (PPAR-alpha-interacting complex protein 320 kDa) Length = 2885 Score = 28.9 bits (63), Expect = 6.9 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Frame = -3 Query: 469 ESAPARPLNGSCSATTLPRA---------HLTPAHSPEQAPRPVPFHPLRNPRGSTSACR 317 +S P P NG S T + + A + P P P + RGS S+ Sbjct: 2073 KSEPVSPKNGVLSQATGDQKSGGKSETDRRMVAARTEPLTPNPASKKPRVHKRGSQSSSD 2132 Query: 316 MACSPCRSACAITMPSDAWPRAGDAECSRRTSSDSAS 206 RS+C+ S + + + CS S S+S Sbjct: 2133 SDSDSARSSCSSRSSSSS---SSSSSCSHSRSGSSSS 2166
>HXB13_MOUSE (P70321) Homeobox protein Hox-B13| Length = 286 Score = 28.5 bits (62), Expect = 9.1 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Frame = -3 Query: 451 PLNGSCSATTLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAI-TM 275 PL+ SA + H P +P PVP+ S R + PC A+ T Sbjct: 51 PLDLPGSAEPPKQCHPCPGVPQGASPAPVPYGYFGGGYYSCRVSRSSLKPCAQTAALATY 110 Query: 274 PSDAWPRAGDAECSRRT 224 PS+ P G+ SR T Sbjct: 111 PSET-PAPGEEYPSRPT 126
>ENV_FLVSA (P06752) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 639 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H ++ + H L P G+ AC +PC S + SD Sbjct: 361 TVPKTHQALCKKTQKGHKGT--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIEL 418 Query: 262 WPR 254 WPR Sbjct: 419 WPR 421
>CITE4_MOUSE (Q9WUL8) Cbp/p300-interacting transactivator 4 (MSG1-related| protein 2) (MRG-2) Length = 182 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -1 Query: 267 TPGREPATPSAAGGPA 220 +PGR PA P+AAGGP+ Sbjct: 91 SPGRIPAPPAAAGGPS 106
>VSIG2_MOUSE (Q9Z109) V-set and immunoglobulin domain-containing protein 2| precursor (CT-like protein) (Cortical thymocyte-like protein) Length = 328 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -3 Query: 364 PFHPLRNPRGSTSACRMACSPCRSACAITMPSDAWPRAGDA 242 P HPL + G TS A CRS+ P W R G + Sbjct: 146 PSHPLCSQSGQTSVGGSAALGCRSSEGAPKPVYNWERLGSS 186
>ENV_MLVFF (P26804) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E; R protein] Length = 676 Score = 28.5 bits (62), Expect = 9.1 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 15/95 (15%) Frame = -3 Query: 424 TLPRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITMPSD------A 263 T+P+ H ++ +A + + L P G+ AC +PC SA + +D Sbjct: 398 TVPKTHQALCNTTLKAGKGSYY--LVAPTGTMWACNTGLTPCLSATVLNRTTDYCVLVEL 455 Query: 262 WPRA---------GDAECSRRTSSDSASVTPLLLL 185 WPR E S R + S+T LLL Sbjct: 456 WPRVTYHPPSYVYSQFEKSHRHKREPVSLTLALLL 490
>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (c-erg) (DERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1158 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 400 PAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACA 284 PA +PE P P H L NP S S+C +A + R +CA Sbjct: 241 PAGAPEPLPSPRA-HSL-NPDASGSSCSLARTRSRESCA 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,822,466 Number of Sequences: 219361 Number of extensions: 941601 Number of successful extensions: 3892 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 3606 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3865 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
