ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 605 e-170
2gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 583 e-163
3ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 256 4e-65
4gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 236 4e-59
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 236 4e-59
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 236 4e-59
7gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 236 4e-59
8gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 212 5e-52
9gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 212 5e-52
10gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 212 5e-52
11gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 149 7e-33
12ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 125 1e-25
13gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 125 1e-25
14gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 125 1e-25
15dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
16emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 109 6e-21
17gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 72 1e-09
18gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 62 1e-06
19gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosom... 50 0.005
20ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LO... 50 0.005
21ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 ... 50 0.005
22gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosom... 50 0.005
23dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched li... 50 0.005
24ref|NM_016967.2| Mus musculus oligodendrocyte transcription fact... 44 0.29
25gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, co... 44 0.29
26emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 44 0.29
27gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosom... 44 0.29
28dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 44 0.29
29gb|BC051967.1| Mus musculus oligodendrocyte transcription factor... 44 0.29
30gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.29
31dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, comple... 44 0.29
32emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on ch... 42 1.1
33ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG762... 42 1.1
34emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene 42 1.1
35emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene 42 1.1
36emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A stra... 42 1.1
37dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groE... 42 1.1
38gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, com... 42 1.1
39gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, com... 42 1.1
40gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genom... 40 4.5
41ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
42ref|XM_464767.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
43ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
44ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative... 40 4.5
45gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.5
46gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
47gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.5
48ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM044... 40 4.5
49gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome... 40 4.5
50emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.5
51emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,... 40 4.5
52gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.5
53gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 40 4.5
54gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Can... 40 4.5
55gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.5
56gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Canc... 40 4.5
57gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A... 40 4.5
58dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
59gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, co... 40 4.5
60dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
61dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
62dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
63dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
64dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
65dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
66dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
67gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, com... 40 4.5
68gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, comple... 40 4.5
69dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
70dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
71dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.5
72dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
73dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
74dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
75dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
76dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
77emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene ... 40 4.5
78gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, com... 40 4.5
79gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.5
80gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
81gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
82emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4,... 40 4.5
83gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Can... 40 4.5 
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  605 bits (305), Expect = e-170
 Identities = 305/305 (100%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 97
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 60

                                                                       
Query: 98  agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 120

                                                                       
Query: 158 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 180

                                                                       
Query: 218 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 240

                                                                       
Query: 278 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 300

                
Query: 338 tggag 342
           |||||
Sbjct: 301 tggag 305
to top
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  583 bits (294), Expect = e-163
 Identities = 297/298 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    cacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctggtgc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3407 cacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctggtgc 3466

                                                                        
Query: 61   cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 3526

                                                                        
Query: 121  ctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 ctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 3586

                                                                        
Query: 181  atgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3587 atgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggc 3646

                                                                      
Query: 241  gagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaag 298
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3647 gagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccatcgaccaag 3704



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                          
Query: 297  agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggag 342
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4253 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggag 4298
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  256 bits (129), Expect = 4e-65
 Identities = 165/177 (93%)
 Strand = Plus / Plus

                                                                       
Query: 157 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 216
           |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 49  cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 108

                                                                       
Query: 217 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 276
           |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 109 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 168

                                                                    
Query: 277 agctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcg 333
           ||||||||||||||||||| | ||||||||   || ||||||||||| |||||||||
Sbjct: 169 agctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcg 225
to top
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  236 bits (119), Expect = 4e-59
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                         
Query: 157   cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 216
             |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 42943

                                                                         
Query: 217   gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 276
             |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 42944 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 43003

                                
Query: 277   agctccaccgccgtcgacc 295
             |||||||||||||||||||
Sbjct: 43004 agctccaccgccgtcgacc 43022
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  236 bits (119), Expect = 4e-59
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 157      cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 216
                |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27798813

                                                                            
Query: 217      gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 276
                |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 27798814 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27798873

                                   
Query: 277      agctccaccgccgtcgacc 295
                |||||||||||||||||||
Sbjct: 27798874 agctccaccgccgtcgacc 27798892



 Score =  125 bits (63), Expect = 1e-25
 Identities = 129/151 (85%)
 Strand = Plus / Plus

                                                                            
Query: 145      aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
                ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30023352

                                                                            
Query: 205      aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
                |||||||||||||||||| ||||||||||||||  |||||||||||||   |||||||||
Sbjct: 30023353 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30023412

                                               
Query: 265      tgccagcttatcagctccaccgccgtcgacc 295
                ||||||||  |||||||| ||  ||||||||
Sbjct: 30023413 tgccagctcgtcagctcctccctcgtcgacc 30023443



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 2        acacactcacgcaacacaca 21
                ||||||||||||||||||||
Sbjct: 22625516 acacactcacgcaacacaca 22625535



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 20262030 gagaggaggccaagaacaag 20262049
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  236 bits (119), Expect = 4e-59
 Identities = 134/139 (96%)
 Strand = Plus / Plus

                                                                            
Query: 157      cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 216
                |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27890137

                                                                            
Query: 217      gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 276
                |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 27890138 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27890197

                                   
Query: 277      agctccaccgccgtcgacc 295
                |||||||||||||||||||
Sbjct: 27890198 agctccaccgccgtcgacc 27890216



 Score =  125 bits (63), Expect = 1e-25
 Identities = 129/151 (85%)
 Strand = Plus / Plus

                                                                            
Query: 145      aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
                ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30114774

                                                                            
Query: 205      aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
                |||||||||||||||||| ||||||||||||||  |||||||||||||   |||||||||
Sbjct: 30114775 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30114834

                                               
Query: 265      tgccagcttatcagctccaccgccgtcgacc 295
                ||||||||  |||||||| ||  ||||||||
Sbjct: 30114835 tgccagctcgtcagctcctccctcgtcgacc 30114865



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 2        acacactcacgcaacacaca 21
                ||||||||||||||||||||
Sbjct: 22618545 acacactcacgcaacacaca 22618564



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 20255059 gagaggaggccaagaacaag 20255078
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  236 bits (119), Expect = 4e-59
 Identities = 134/139 (96%)
 Strand = Plus / Minus

                                                                         
Query: 157   cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 216
             |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 15080

                                                                         
Query: 217   gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 276
             |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 15079 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 15020

                                
Query: 277   agctccaccgccgtcgacc 295
             |||||||||||||||||||
Sbjct: 15019 agctccaccgccgtcgacc 15001
to top
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  212 bits (107), Expect = 5e-52
 Identities = 146/159 (91%)
 Strand = Plus / Plus

                                                                       
Query: 136 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 195
           |||||||||||||||   || |||||||||||||||||||||||||||||||||||||||
Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 235

                                                                       
Query: 196 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 255
           ||||||||||||||||||||||||||| || | ||| ||||| |||||||||||||||||
Sbjct: 236 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 295

                                                  
Query: 256 ggcgtcacctgccagcttatcagctccaccgccgtcgac 294
           || |||||||||||||| ||||||||||||  |||||||
Sbjct: 296 ggggtcacctgccagctcatcagctccaccctcgtcgac 334
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  212 bits (107), Expect = 5e-52
 Identities = 146/159 (91%)
 Strand = Plus / Plus

                                                                       
Query: 136 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 195
           |||||||||||||||   || |||||||||||||||||||||||||||||||||||||||
Sbjct: 28  acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 87

                                                                       
Query: 196 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 255
           ||||||||||||||||||||||||||| || | ||| ||||| |||||||||||||||||
Sbjct: 88  ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 147

                                                  
Query: 256 ggcgtcacctgccagcttatcagctccaccgccgtcgac 294
           || |||||||||||||| ||||||||||||  |||||||
Sbjct: 148 ggggtcacctgccagctcatcagctccaccctcgtcgac 186
to top
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  212 bits (107), Expect = 5e-52
 Identities = 146/159 (91%)
 Strand = Plus / Plus

                                                                       
Query: 136 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 195
           |||||||||||||||   || |||||||||||||||||||||||||||||||||||||||
Sbjct: 90  acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 149

                                                                       
Query: 196 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 255
           ||||||||||||||||||||||||||| || | ||| ||||| |||||||||||||||||
Sbjct: 150 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 209

                                                  
Query: 256 ggcgtcacctgccagcttatcagctccaccgccgtcgac 294
           || |||||||||||||| ||||||||||||  |||||||
Sbjct: 210 ggggtcacctgccagctcatcagctccaccctcgtcgac 248
to top
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  149 bits (75), Expect = 7e-33
 Identities = 156/183 (85%)
 Strand = Plus / Plus

                                                                       
Query: 160 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 219
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 121 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 180

                                                                       
Query: 220 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 279
             | |||| |||||| ||  |||| ||||||||   ||||||||||||||||| ||||||
Sbjct: 181 cacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 240

                                                                       
Query: 280 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 339
           ||||||  |||||||||  ||||||| || |||||||||||||||||||||||| | |||
Sbjct: 241 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 300

              
Query: 340 gag 342
           |||
Sbjct: 301 gag 303
to top
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  125 bits (63), Expect = 1e-25
 Identities = 129/151 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
           ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 34  aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 93

                                                                       
Query: 205 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
           |||||||||||||||||| ||||||||||||||  |||||||||||||   |||||||||
Sbjct: 94  aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 153

                                          
Query: 265 tgccagcttatcagctccaccgccgtcgacc 295
           ||||||||  |||||||| ||  ||||||||
Sbjct: 154 tgccagctcgtcagctcctccctcgtcgacc 184
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  125 bits (63), Expect = 1e-25
 Identities = 129/151 (85%)
 Strand = Plus / Minus

                                                                         
Query: 145   aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
             ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 84399

                                                                         
Query: 205   aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
             |||||||||||||||||| ||||||||||||||  |||||||||||||   |||||||||
Sbjct: 84398 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 84339

                                            
Query: 265   tgccagcttatcagctccaccgccgtcgacc 295
             ||||||||  |||||||| ||  ||||||||
Sbjct: 84338 tgccagctcgtcagctcctccctcgtcgacc 84308
to top
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  125 bits (63), Expect = 1e-25
 Identities = 96/107 (89%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccg 286
           ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 140 tcgacggcatcggcgagttcctcggccgcggcgtcacctgccagcttatcagctccaccg 199

                                                          
Query: 287 ccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcg 333
            ||||||||   ||||||||   ||||||||| ||||||||||||||
Sbjct: 200 tcgtcgaccctaacaacggcaaccgcgggaagttgggcgcggaggcg 246
to top
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  125 bits (63), Expect = 1e-25
 Identities = 129/151 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
           ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 208

                                                                       
Query: 205 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
           |||||||||||||||||| ||||||||||||||  |||||||||||||   |||||||||
Sbjct: 209 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 268

                                          
Query: 265 tgccagcttatcagctccaccgccgtcgacc 295
           ||||||||  |||||||| ||  ||||||||
Sbjct: 269 tgccagctcgtcagctcctccctcgtcgacc 299
to top
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  109 bits (55), Expect = 6e-21
 Identities = 127/151 (84%)
 Strand = Plus / Plus

                                                                       
Query: 145 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 204
           ||||||| |||||| ||||||||| |  | || ||||||||||||||||  || ||| ||
Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 190

                                                                       
Query: 205 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 264
           |||||||||||||||||| |||||||  |||||  |||||||||||||   |||||||||
Sbjct: 191 aacgacttcggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacc 250

                                          
Query: 265 tgccagcttatcagctccaccgccgtcgacc 295
           ||||||||  |||||||| ||  ||||||||
Sbjct: 251 tgccagctcgtcagctcctccctcgtcgacc 281
to top
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 224  tcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctcca 283
            |||| |||||| |||||||||||||||||   |||||||||||||| ||  |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 284  ccgccgtcgacc 295
            ||| ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 160  ctcaagggcacggtggtgctcatgcgcaagaacgtgct 197
            ||||||||||   |||||||||||||||||| ||||||
Sbjct: 2317 ctcaagggcaacctggtgctcatgcgcaagaccgtgct 2354
to top
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgag 243
           ||||||||||  || ||| |||||||||||||||||||| || |||   || ||  ||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 244 ttcctcggcaagggcgtcacctgccagcttatcagctcc 282
           |||||||||   |||||||||||||||||  ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99
to top
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete
             sequence
          Length = 202929

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 318   ggtgggcgcggaggcggagctggag 342
             |||||||||||||||||||||||||
Sbjct: 65371 ggtgggcgcggaggcggagctggag 65347
to top
>ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LOC665118 (LOC665118),
           mRNA
          Length = 444

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 318 ggtgggcgcggaggcggagctggag 342
           |||||||||||||||||||||||||
Sbjct: 230 ggtgggcgcggaggcggagctggag 206
to top
>ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 (Drosophila),
           transcript variant 2 (Dlg5), mRNA
          Length = 7853

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 318 ggtgggcgcggaggcggagctggag 342
           |||||||||||||||||||||||||
Sbjct: 117 ggtgggcgcggaggcggagctggag 141
to top
>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete
             sequence
          Length = 203950

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 318   ggtgggcgcggaggcggagctggag 342
             |||||||||||||||||||||||||
Sbjct: 47104 ggtgggcgcggaggcggagctggag 47128
to top
>dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1109K17 product:discs, large homolog 5
           (Drosophila), full insert sequence
          Length = 7852

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 318 ggtgggcgcggaggcggagctggag 342
           |||||||||||||||||||||||||
Sbjct: 118 ggtgggcgcggaggcggagctggag 142
to top
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA
          Length = 2462

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    cacacactcacgcaacacacat 22
            ||||||||||||||||||||||
Sbjct: 1893 cacacactcacgcaacacacat 1914
to top
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence
          Length = 210023

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1      cacacactcacgcaacacacat 22
              ||||||||||||||||||||||
Sbjct: 161085 cacacactcacgcaacacacat 161106
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     tgggcgcggaggcggagctgga 341
               ||||||||||||||||||||||
Sbjct: 1904267 tgggcgcggaggcggagctgga 1904288
to top
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete
            sequence
          Length = 204940

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    cacacactcacgcaacacacat 22
            ||||||||||||||||||||||
Sbjct: 4077 cacacactcacgcaacacacat 4098
to top
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830025B18 product:oligodendrocyte
            transcription factor 2, full insert sequence
          Length = 2362

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    cacacactcacgcaacacacat 22
            ||||||||||||||||||||||
Sbjct: 1871 cacacactcacgcaacacacat 1892
to top
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone
            MGC:62240 IMAGE:5695592), complete cds
          Length = 2462

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    cacacactcacgcaacacacat 22
            ||||||||||||||||||||||
Sbjct: 1893 cacacactcacgcaacacacat 1914
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 160     ctcaagggcacggtggtgctca 181
               ||||||||||||||||||||||
Sbjct: 1464951 ctcaagggcacggtggtgctca 1464930
to top
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds
          Length = 2433

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    cacacactcacgcaacacacat 22
            ||||||||||||||||||||||
Sbjct: 1872 cacacactcacgcaacacacat 1893
to top
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the
             gene for neuropeptide FF 1; RFamide-related peptide
             receptor (OT7T022), the 3' end of a novel gene (FLJ10751)
             and two CpG islands, complete sequence
          Length = 80236

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    gaggagaggaggccaagaaca 103
             |||||||||||||||||||||
Sbjct: 46254 gaggagaggaggccaagaaca 46274
to top
>ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC658981), mRNA
          Length = 4060

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 214  ggcgccaccatcatcgacggcatcg 238
            ||||||| |||||||||||||||||
Sbjct: 3298 ggcgccatcatcatcgacggcatcg 3322
to top
>emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene
          Length = 1632

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 218  ccaccatcatcgacggcatcggcga 242
            ||||||||||||||||| |||||||
Sbjct: 989  ccaccatcatcgacggcttcggcga 1013
to top
>emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene
          Length = 1632

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 218  ccaccatcatcgacggcatcggcga 242
            ||||||||||||||||| |||||||
Sbjct: 989  ccaccatcatcgacggcttcggcga 1013
to top
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              2/7
          Length = 349061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 218    ccaccatcatcgacggcatcggcga 242
              ||||||||||||||||| |||||||
Sbjct: 112319 ccaccatcatcgacggcttcggcga 112343
to top
>dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groES and groEL genes, complete
            cds
          Length = 2389

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 218  ccaccatcatcgacggcatcggcga 242
            |||||||||||||||| ||||||||
Sbjct: 1517 ccaccatcatcgacggtatcggcga 1541
to top
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence
          Length = 157691

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     cacacactcacgcaacacaca 21
             |||||||||||||||||||||
Sbjct: 40763 cacacactcacgcaacacaca 40743
to top
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence
          Length = 235286

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      cacacactcacgcaacacaca 21
              |||||||||||||||||||||
Sbjct: 137837 cacacactcacgcaacacaca 137817
to top
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
             sequence
          Length = 157397

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     acacactcacgcaacacaca 21
             ||||||||||||||||||||
Sbjct: 42630 acacactcacgcaacacaca 42611
to top
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   gagaggaggccaagaacaag 105
            ||||||||||||||||||||
Sbjct: 1601 gagaggaggccaagaacaag 1620
to top
>ref|XM_464767.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 291

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gctccaccgccgtcgaccaa 297
           ||||||||||||||||||||
Sbjct: 53  gctccaccgccgtcgaccaa 72
to top
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 773

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   acacactcacgcaacacaca 21
           ||||||||||||||||||||
Sbjct: 113 acacactcacgcaacacaca 94
to top
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor
            (OSJNBa0011L09.15), mRNA
          Length = 3339

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   gagaggaggccaagaacaag 105
            ||||||||||||||||||||
Sbjct: 1352 gagaggaggccaagaacaag 1371
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   tcgacggcatcggcgagttc 246
             ||||||||||||||||||||
Sbjct: 82079 tcgacggcatcggcgagttc 82060
to top
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 53789 gagaggaggccaagaacaag 53770
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     catcatcgacggcatcggcg 241
               ||||||||||||||||||||
Sbjct: 2473899 catcatcgacggcatcggcg 2473918
to top
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA
          Length = 5223

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   gaggaggccaagaacaagat 107
            ||||||||||||||||||||
Sbjct: 4795 gaggaggccaagaacaagat 4814
to top
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence
          Length = 208028

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tccatcttcactgaaaagtgaaaa 45
             ||||||||||| ||||||||||||
Sbjct: 15168 tccatcttcaccgaaaagtgaaaa 15191
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    catcatcgacggcatcggcg 241
              ||||||||||||||||||||
Sbjct: 653887 catcatcgacggcatcggcg 653906
to top
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
              complete sequence
          Length = 130433

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gagaggaggccaagaacaag 105
              ||||||||||||||||||||
Sbjct: 126301 gagaggaggccaagaacaag 126282
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 211     ttcggcgccaccatcatcgacggcatcggcga 242
               |||| |||||||||||||| |||| |||||||
Sbjct: 1835833 ttcgccgccaccatcatcggcggcttcggcga 1835864
to top
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete
             sequence
          Length = 177565

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 85112 gagaggaggccaagaacaag 85093
to top
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202745

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     gaggagaggaggccaagaac 102
              ||||||||||||||||||||
Sbjct: 139186 gaggagaggaggccaagaac 139205
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     ctcaagggcacggtggtgct 179
               ||||||||||||||||||||
Sbjct: 2352289 ctcaagggcacggtggtgct 2352308
to top
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207673

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tgaaaagtgaaaaacagtgt 52
             ||||||||||||||||||||
Sbjct: 31614 tgaaaagtgaaaaacagtgt 31595
to top
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete
             sequence
          Length = 156929

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 57337 gagaggaggccaagaacaag 57356
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 86      gagaggaggccaagaacaag 105
               ||||||||||||||||||||
Sbjct: 8315788 gagaggaggccaagaacaag 8315769
to top
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence
          Length = 198821

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     cacacactcacgcaacacac 20
             ||||||||||||||||||||
Sbjct: 67477 cacacactcacgcaacacac 67496
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 11856616 gagaggaggccaagaacaag 11856597
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 12678450 gagaggaggccaagaacaag 12678469
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 86      gagaggaggccaagaacaag 105
               ||||||||||||||||||||
Sbjct: 9257767 gagaggaggccaagaacaag 9257786
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 12246668 gagaggaggccaagaacaag 12246687
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 23122014 gagaggaggccaagaacaag 23121995
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     gctccaccgccgtcgaccaa 297
               ||||||||||||||||||||
Sbjct: 7256294 gctccaccgccgtcgaccaa 7256313
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 27388692 gagaggaggccaagaacaag 27388711
to top
>gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, complete cds
          Length = 4083

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 172 gtggtgctcatgcgcaagaacgtgctggacctcaac 207
           |||||||| ||||||||||| ||| ||||| |||||
Sbjct: 73  gtggtgctgatgcgcaagaatgtgttggacttcaac 108
to top
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence
          Length = 160810

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 24    catcttcactgaaaagtgaaaaacagtg 51
             ||||||||||||||| || |||||||||
Sbjct: 99888 catcttcactgaaaactgtaaaacagtg 99915
to top
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0014E08
          Length = 144219

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 71587 gagaggaggccaagaacaag 71606
to top
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0063G05
          Length = 182681

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     gagaggaggccaagaacaag 105
              ||||||||||||||||||||
Sbjct: 169209 gagaggaggccaagaacaag 169228
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 155     cccggctcaagggcacggtggtgc 178
               |||||||||| |||||||||||||
Sbjct: 5837219 cccggctcaacggcacggtggtgc 5837242
to top
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1742_G01
          Length = 154912

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 83058 gagaggaggccaagaacaag 83077
to top
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1010G04a
          Length = 61450

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 27331 gagaggaggccaagaacaag 27350
to top
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0620H05
          Length = 161808

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gctccaccgccgtcgaccaa 297
              ||||||||||||||||||||
Sbjct: 156231 gctccaccgccgtcgaccaa 156250
to top
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gctccaccgccgtcgaccaa 297
             ||||||||||||||||||||
Sbjct: 32102 gctccaccgccgtcgaccaa 32121
to top
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full
           insert sequence
          Length = 773

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   acacactcacgcaacacaca 21
           ||||||||||||||||||||
Sbjct: 113 acacactcacgcaacacaca 94
to top
>emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene for putative
           oxidoreductase, exons 1-8
          Length = 2254

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 285 cgccgtcgaccaagacaacggcgg 308
           |||||||||||||| |||||||||
Sbjct: 875 cgccgtcgaccaagccaacggcgg 898
to top
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence
          Length = 221548

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tccatcttcactgaaaagtgaaaa 45
             ||||||||||| ||||||||||||
Sbjct: 93451 tccatcttcaccgaaaagtgaaaa 93428
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 222     catcatcgacggcatcggcg 241
               ||||||||||||||||||||
Sbjct: 2354751 catcatcgacggcatcggcg 2354732
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 12685790 gagaggaggccaagaacaag 12685809
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 86       gagaggaggccaagaacaag 105
                ||||||||||||||||||||
Sbjct: 11856287 gagaggaggccaagaacaag 11856268
to top
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17,
             complete sequence
          Length = 99093

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gagaggaggccaagaacaag 105
             ||||||||||||||||||||
Sbjct: 28356 gagaggaggccaagaacaag 28337
to top
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 154271

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tgaaaagtgaaaaacagtgt 52
             ||||||||||||||||||||
Sbjct: 70085 tgaaaagtgaaaaacagtgt 70104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,074,119
Number of Sequences: 3902068
Number of extensions: 3074119
Number of successful extensions: 68272
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67078
Number of HSP's gapped (non-prelim): 1193
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top