Clone Name | bastl07e08 |
---|---|
Clone Library Name | barley_pub |
>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 209 bits (532), Expect = 3e-54 Identities = 105/114 (92%), Positives = 105/114 (92%) Frame = +2 Query: 107 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEE 286 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP KNGYGDYLIEEEE Sbjct: 1 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60 Query: 287 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGF 448 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGF Sbjct: 61 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGF 114
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 166 bits (420), Expect = 2e-41 Identities = 83/114 (72%), Positives = 93/114 (81%), Gaps = 1/114 (0%) Frame = +2 Query: 110 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXKNGYGDYLIEEEE 286 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ KNGY DYLIEEEE Sbjct: 3 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62 Query: 287 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGF 448 G+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FMV FA +IFLFLGS+EGF Sbjct: 63 GINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGF 116
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 161 bits (407), Expect = 8e-40 Identities = 78/121 (64%), Positives = 96/121 (79%), Gaps = 4/121 (3%) Frame = +2 Query: 98 LTAMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXX----KNGYGD 265 + A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T KNGYGD Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60 Query: 266 YLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEG 445 YLIEEEEG+ND +VV KCAEIQTAISEGATSFLFT Y+YVG+FM+ FAA+IF+FLGS+EG Sbjct: 61 YLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEG 120 Query: 446 F 448 F Sbjct: 121 F 121
>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 36.6 bits (83), Expect = 0.030 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = +2 Query: 314 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGF 448 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGF 88
>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 36.6 bits (83), Expect = 0.030 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = +2 Query: 314 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGF 448 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGF 88
>HPPA2_RHOPA (Q8KY01) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 725 Score = 33.1 bits (74), Expect = 0.33 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +2 Query: 323 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSI 439 EI AI +GA ++L Y+ + + V A +IF FLG + Sbjct: 40 EIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGL 78
>HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 673 Score = 32.3 bits (72), Expect = 0.56 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +2 Query: 323 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 433 EI I +GA +FL T Y+Y+ F+V+ I+ +F+G Sbjct: 38 EIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVG 74
>HPPA_BRAJA (Q89K83) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 706 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 323 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 433 EI A+ EGA ++L Y +G+ +V ++ FLG Sbjct: 37 EIAAAVREGAQAYLRRQYTTIGIVGIVIFVLLVYFLG 73
>HPPA1_RHOPA (P60363) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 706 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 323 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 433 EI A+ EGA ++L Y + + VV A++ FLG Sbjct: 37 EIAGAVREGAQAYLKRQYMTIAIVGVVIFALLAYFLG 73
>HPPA1_METAC (Q8TJA9) Pyrophosphate-energized proton pump 1 (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase 1) (H+-PPase 1) (Membrane-bound proton-translocating pyrophosphatase 1) Length = 676 Score = 28.5 bits (62), Expect = 8.1 Identities = 25/97 (25%), Positives = 39/97 (40%) Frame = +2 Query: 140 LIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEEGLNDHNVVVKC 319 L P+C +IG++FA + V G G+ LI+ Sbjct: 7 LAPICALIGLIFAGISYKNVQ---------------NEGAGNDLIK-------------- 37 Query: 320 AEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFL 430 +I +I GA +L Y+ + +F+V A II L L Sbjct: 38 -KITASIHGGAMVYLNRQYRAIAVFVVFLAIIIALIL 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,345,161 Number of Sequences: 219361 Number of extensions: 429038 Number of successful extensions: 1589 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1583 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)