>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III|
          Length = 902

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = +3

Query: 135 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVHNCAKLTLVLAGPQLPKKIRA 314
           I+ PFR+IG+++   VPF ++  GT   VT SVG  F  ++C KL L+  G QL K+I  
Sbjct: 23  IYAPFRSIGHVSNA-VPFDIEARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKEITC 81

Query: 315 LASFKEYTFAAYGSDIAVFKRTDLVVTFTKHEEKVHMLYL--FGD 443
           L SFK++   A GS I  +KR  ++      +E   + +L  FG+
Sbjct: 82  LKSFKDFMLVAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLDAFGE 126

>WDR36_HUMAN (Q8NI36) WD repeat-containing protein 36 (T-cell activation WD|
           repeat-containing protein) (TA-WDRP)
          Length = 951

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
 Frame = +3

Query: 135 IFEPFRAIGYITTGGVPFSLQ--RLGTETFVTVSVGKAFHVHNCAKLTLVLAGPQLPKKI 308
           +F  FRA+G + +  +P  ++   L    +VT  VGK+FH ++  KL+LV     +P+ I
Sbjct: 69  LFAGFRALG-LFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDI 127

Query: 309 RALASFKEYTFAAYGSDIAVFKRT-DLVVTFTKHEEKVHMLYLFGD 443
             +A+     FAAYG+  + F R  ++V TF  H+ ++H L  FGD
Sbjct: 128 CCMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFGD 173

>YL409_YEAST (Q06078) Hypothetical 104.8 kDa Trp-Asp repeats-containing protein|
           in RPL31B-VIP1 intergenic region
          Length = 939

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = +3

Query: 135 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVHNCAKLTLV-LAGPQLPKKIR 311
           IF PFR IG ++ G VPF+   LG+  ++   VGK F +++   L L+ ++  + P  I 
Sbjct: 23  IFSPFRIIGNVSNG-VPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIV 81

Query: 312 ALASFKEYTFAAYGSDIAVFKR-TDLVVTFTKHEEKVHMLYLFGD 443
           AL++   Y +AAY + + ++KR  +  +   + +  V  L +FGD
Sbjct: 82  ALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGD 126

>MOT2_MESAU (P53988) Monocarboxylate transporter 2 (MCT 2)|
          Length = 484

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +3

Query: 135 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVHNCAKLTLVLAGPQLPKKIRA 314
           + E +  IG+I   G+ F+LQ   T       +GK F+        L +AG   P  + +
Sbjct: 110 VLELYLTIGFIGGLGLAFNLQPALT------IIGKYFYRRRPMANGLAMAGS--PVFLSS 161

Query: 315 LASFKEYTFAAYG 353
           LA F +Y F +YG
Sbjct: 162 LAPFNQYLFNSYG 174

>TLR9_HUMAN (Q9NR96) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1032

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 283 PDLNCPRRSAPLHPSRNTHLLRTEAISRFSNGLIW 387
           P + CPR    LHP   +HL R E +    + L W
Sbjct: 264 PCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSW 298

>TRUD_METMA (Q8Q0M2) Probable tRNA pseudouridine synthase D (EC 5.4.99.-)|
           (tRNA-uridine isomerase D) (tRNA pseudouridylate
           synthase D)
          Length = 438

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 165 ITTGGVP--FSLQRLGTETFVTVSVGKAFHVHNCAKLTLVLAGPQLPKK 305
           +  GGVP  F +QR G+   VT  VGKA    N  K  L+      P++
Sbjct: 161 LAQGGVPNFFGIQRFGSVRPVTHLVGKAIVEGNFEKAALLYIAEPFPEE 209

>TM11D_RAT (Q8VHJ4) Transmembrane protease, serine 11D precursor (EC 3.4.21.-)|
           (Airway trypsin-like protease) (AT) (Adrenal secretory
           serine protease) (AsP) [Contains: Transmembrane
           protease, serine 11D non-catalytic chain; Transmembrane
           protease, serine
          Length = 417

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 288 PQLPKKIRALASFKEYTFAAYGSDIAVFKRTDLVVTFTKHEEKV 419
           P+L  ++RA+ +  EY      +DIAV  + D  VTFT++  +V
Sbjct: 248 PRLRVRVRAILAHAEYNSITRDNDIAVV-QLDRPVTFTRNIHRV 290

>PUR6_CAEEL (Q10457) Probable multifunctional protein ADE2 [Includes:|
           Phosphoribosylaminoimidazole-succinocarboxamide synthase
           (EC 6.3.2.6) (SAICAR synthetase);
           Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)
           (AIR carboxylase) (AIRC)]
          Length = 423

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 372 KRTDLVVTFTKHEEKVHMLYLFG 440
           K  D+  TF+KH++K H+L + G
Sbjct: 254 KVMDITATFSKHQQKCHVLVIMG 276


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,077,945
Number of Sequences: 219361
Number of extensions: 763522
Number of successful extensions: 2118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)