ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 202 7e-49
2dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 202 7e-49
3ref|NM_116732.2| Arabidopsis thaliana nucleotide binding AT4G049... 58 3e-05
4gb|AY096634.1| Arabidopsis thaliana putative WD-repeat membrane ... 58 3e-05
5gb|AY059784.1| Arabidopsis thaliana putative WD-repeat membrane ... 58 3e-05
6emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, ... 58 3e-05
7gb|AF128393.1|T1J1 Arabidopsis thaliana BAC T1J1 58 3e-05
8emb|AL138883.12| Human DNA sequence from clone RP1-23G18 on chro... 44 0.38
9emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.38
10gb|AE015451.1| Pseudomonas putida KT2440 complete genome 44 0.38
11ref|NM_188706.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
12gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complet... 42 1.5
13gb|AC093815.3| Homo sapiens BAC clone RP11-362M19 from 4, comple... 42 1.5
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chro... 42 1.5
17gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
18gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
19gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
20gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
21gb|BC043029.1| Mus musculus vacuolar protein sorting 72 (yeast),... 40 6.0
22gb|BC004834.1| Mus musculus vacuolar protein sorting 72 (yeast),... 40 6.0
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.0
24gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.0
25ref|NM_009336.2| Mus musculus vacuolar protein sorting 72 (yeast... 40 6.0
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.0
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.0
28gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-bind... 40 6.0
29gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.0
30emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
31emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
32emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
33emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
34dbj|AK140284.1| Mus musculus adult male corpora quadrigemina cDN... 40 6.0
35dbj|AK155191.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.0
36gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.0
37emb|CR354346.1| Gallus gallus finished cDNA, clone ChEST76l18 40 6.0
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
44emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
45gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 6.0
46gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome... 40 6.0
47dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
48dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
49dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
50dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51dbj|AK110780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
52gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
54emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 40 6.0
55emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
56emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
57emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
58emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
59emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
60emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
61emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
62emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
63emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
64emb|AL731750.3|CNS08C7Z Oryza sativa chromosome 12, . BAC OJ1055... 40 6.0
65gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromoso... 40 6.0
66dbj|D43643.1|MUSYL1PB Mouse YL-1 mRNA for YL-1 protein (nuclear ... 40 6.0 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  202 bits (102), Expect = 7e-49
 Identities = 123/130 (94%)
 Strand = Plus / Plus

                                                                            
Query: 128      gatggggatcttcgagccgttccgcgcgatcgggtacatcaccacgggcggcgtgccctt 187
                ||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||
Sbjct: 25920276 gatggggatcttcgagccgttccgcgccatcgggtacatcacggccggcggcgtgccctt 25920335

                                                                            
Query: 188      ctccctgcagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
                |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 25920336 ctccgtgcagcgcctcggcaccgagaccttcgtcgccgtcagcgtcggcaaggccttcca 25920395

                          
Query: 248      cgtccacaac 257
                |||| |||||
Sbjct: 25920396 cgtctacaac 25920405



 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                            
Query: 285      ggacctcaactgcccaagaagatccgcgcccttgcatccttcaaggaatacacatttgct 344
                ||||||||| |||||||||||||||| || |||||||| | |||||| || |||||||||
Sbjct: 25920889 ggacctcaattgcccaagaagatccgtgctcttgcatcgtacaaggattatacatttgct 25920948

                                                             
Query: 345      gcgtacggaagcgatatcgcggttttcaaacggactgatctggtg 389
                ||||| ||||| |||||||| ||||||||||| ||||||| ||||
Sbjct: 25920949 gcgtatggaagtgatatcgctgttttcaaacgaactgatcaggtg 25920993



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 47       cctctaaaaccctcgccgccggcgcaccc 75
                |||||||||||||||||| ||||||||||
Sbjct: 25920145 cctctaaaaccctcgccggcggcgcaccc 25920173



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 8869141 ttcctcctcgcgccgccgcc 8869122
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score =  202 bits (102), Expect = 7e-49
 Identities = 123/130 (94%)
 Strand = Plus / Plus

                                                                         
Query: 128   gatggggatcttcgagccgttccgcgcgatcgggtacatcaccacgggcggcgtgccctt 187
             ||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||
Sbjct: 75374 gatggggatcttcgagccgttccgcgccatcgggtacatcacggccggcggcgtgccctt 75433

                                                                         
Query: 188   ctccctgcagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
             |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 75434 ctccgtgcagcgcctcggcaccgagaccttcgtcgccgtcagcgtcggcaaggccttcca 75493

                       
Query: 248   cgtccacaac 257
             |||| |||||
Sbjct: 75494 cgtctacaac 75503



 Score =  113 bits (57), Expect = 5e-22
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                         
Query: 285   ggacctcaactgcccaagaagatccgcgcccttgcatccttcaaggaatacacatttgct 344
             ||||||||| |||||||||||||||| || |||||||| | |||||| || |||||||||
Sbjct: 75987 ggacctcaattgcccaagaagatccgtgctcttgcatcgtacaaggattatacatttgct 76046

                                                          
Query: 345   gcgtacggaagcgatatcgcggttttcaaacggactgatctggtg 389
             ||||| ||||| |||||||| ||||||||||| ||||||| ||||
Sbjct: 76047 gcgtatggaagtgatatcgctgttttcaaacgaactgatcaggtg 76091



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 47    cctctaaaaccctcgccgccggcgcaccc 75
             |||||||||||||||||| ||||||||||
Sbjct: 75243 cctctaaaaccctcgccggcggcgcaccc 75271
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>ref|NM_116732.2| Arabidopsis thaliana nucleotide binding AT4G04940 mRNA, complete
           cds
          Length = 3058

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 207 accgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
           |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 217 accgagactttcgtcaccgtcagcgtcggcaaagctttcca 257
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>gb|AY096634.1| Arabidopsis thaliana putative WD-repeat membrane protein
           (At4g04940) mRNA, complete cds
          Length = 2764

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 207 accgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
           |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 76  accgagactttcgtcaccgtcagcgtcggcaaagctttcca 116
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>gb|AY059784.1| Arabidopsis thaliana putative WD-repeat membrane protein
           (At4g04940) mRNA, complete cds
          Length = 3056

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 207 accgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
           |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 200 accgagactttcgtcaccgtcagcgtcggcaaagctttcca 240
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>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
          Length = 198563

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 207   accgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
             |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 48992 accgagactttcgtcaccgtcagcgtcggcaaagctttcca 48952
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>gb|AF128393.1|T1J1 Arabidopsis thaliana BAC T1J1
          Length = 53778

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 207   accgagaccttcgtcaccgtcagcgtcggcaaggccttcca 247
             |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 41045 accgagactttcgtcaccgtcagcgtcggcaaagctttcca 41005
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>emb|AL138883.12| Human DNA sequence from clone RP1-23G18 on chromosome 6 Contains the 5'
             end of the GMPR gene for monophosphate reductase and a CpG
             island, complete sequence
          Length = 45974

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 19    ttcctcctcgcgccgccgcccc 40
             ||||||||||||||||||||||
Sbjct: 28033 ttcctcctcgcgccgccgcccc 28012
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>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     gaagcccgcgacgtccgccgcg 115
              ||||||||||||||||||||||
Sbjct: 325156 gaagcccgcgacgtccgccgcg 325177
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 226     tcagcgtcggcaaggccttcca 247
               ||||||||||||||||||||||
Sbjct: 3118989 tcagcgtcggcaaggccttcca 3118968
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>ref|NM_188706.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  tcctcctcgcgccgccgcccc 40
           |||||||||||||||||||||
Sbjct: 251 tcctcctcgcgccgccgcccc 271
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>gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complete sequence
          Length = 191781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 108    ccgccgcggccggggggaggg 128
              |||||||||||||||||||||
Sbjct: 116898 ccgccgcggccggggggaggg 116918
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>gb|AC093815.3| Homo sapiens BAC clone RP11-362M19 from 4, complete sequence
          Length = 168105

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 392   tacctttactaaacatgaaga 412
             |||||||||||||||||||||
Sbjct: 15001 tacctttactaaacatgaaga 15021
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 20      tcctcctcgcgccgccgcccc 40
               |||||||||||||||||||||
Sbjct: 7743493 tcctcctcgcgccgccgcccc 7743513



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 18791220 ttcctcctcgcgccgccgcc 18791239
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>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    tcctcctcgcgccgccgcccc 40
             |||||||||||||||||||||
Sbjct: 46074 tcctcctcgcgccgccgcccc 46094
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>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete
              sequence
          Length = 219568

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 108    ccgccgcggccggggggaggg 128
              |||||||||||||||||||||
Sbjct: 186113 ccgccgcggccggggggaggg 186093
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>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093C16, complete sequence
          Length = 206612

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 74751 ttcctcctcgcgccgccgcc 74770



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 44254 ttcctcctcgcgccgccgcc 44273
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>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
             complete sequence
          Length = 95383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 24226 ttcctcctcgcgccgccgcc 24245
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>gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0079H13 map E60284SA, complete sequence
          Length = 116863

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 31720 ttcctcctcgcgccgccgcc 31739
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>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12
              map E60284SA, complete sequence
          Length = 139190

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 120697 ttcctcctcgcgccgccgcc 120678
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>gb|BC043029.1| Mus musculus vacuolar protein sorting 72 (yeast), mRNA (cDNA clone
           MGC:57902 IMAGE:5692301), complete cds
          Length = 1342

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 769 caaggccttccacgtccaca 750
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>gb|BC004834.1| Mus musculus vacuolar protein sorting 72 (yeast), mRNA (cDNA clone
           MGC:6868 IMAGE:2651158), complete cds
          Length = 1318

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 746 caaggccttccacgtccaca 727
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     gcccgcgacgtccgccgcggccgg 120
              |||||||||| |||||||||||||
Sbjct: 658229 gcccgcgacggccgccgcggccgg 658206
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     gatcttcgagccgttccgcg 153
               ||||||||||||||||||||
Sbjct: 2681512 gatcttcgagccgttccgcg 2681531
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>ref|NM_009336.2| Mus musculus vacuolar protein sorting 72 (yeast) (Vps72), mRNA
          Length = 1436

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 768 caaggccttccacgtccaca 749
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 97      gcccgcgacgtccgccgcggccgg 120
               |||||||||| |||||||||||||
Sbjct: 3116837 gcccgcgacggccgccgcggccgg 3116860
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 13941791 ttcctcctcgcgccgccgcc 13941810
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>gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-binding protein gene,
             partial cds; LuxA-like protein, MDO-like protein, and
             AraC-like protein genes, complete cds; nap operon,
             complete sequence; exodeoxyribosylnuclease EdrN (edrN)
             genes, complete cds; and putative sensor protein gene,
             partial cds
          Length = 11020

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   gcaccgagaccttcgtcacc 224
             ||||||||||||||||||||
Sbjct: 10003 gcaccgagaccttcgtcacc 9984
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>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12,
             from chromosome 3, complete sequence
          Length = 161676

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 69691 ttcctcctcgcgccgccgcc 69672
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 97      gcccgcgacgtccgccgcggccgg 120
               |||||||||| |||||||||||||
Sbjct: 2846918 gcccgcgacggccgccgcggccgg 2846941
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>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03,
             complete sequence
          Length = 125780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 35495 ttcctcctcgcgccgccgcc 35514



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 30305 ttcctcctcgcgccgccgcc 30324
to top
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01,
             complete sequence
          Length = 180264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 27398 ttcctcctcgcgccgccgcc 27379
to top
>emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0080E14,
             complete sequence
          Length = 148064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 65243 ttcctcctcgcgccgccgcc 65224
to top
>dbj|AK140284.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230380P15
           product:transcription factor-like 1, full insert
           sequence
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 766 caaggccttccacgtccaca 747
to top
>dbj|AK155191.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630207G12
           product:transcription factor-like 1, full insert
           sequence
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 766 caaggccttccacgtccaca 747
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     cgtcagcgtcggcaaggcct 243
               ||||||||||||||||||||
Sbjct: 2539541 cgtcagcgtcggcaaggcct 2539522
to top
>emb|CR354346.1| Gallus gallus finished cDNA, clone ChEST76l18
          Length = 846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 ccgccgcggccggggggagg 127
           ||||||||||||||||||||
Sbjct: 20  ccgccgcggccggggggagg 39
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 11213636 ttcctcctcgcgccgccgcc 11213655



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 10776925 ttcctcctcgcgccgccgcc 10776906



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 3838262 ttcctcctcgcgccgccgcc 3838243



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 2310176 ttcctcctcgcgccgccgcc 2310195



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 2304986 ttcctcctcgcgccgccgcc 2305005
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 23687909 ttcctcctcgcgccgccgcc 23687890



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 17916936 ttcctcctcgcgccgccgcc 17916955



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 14360521 ttcctcctcgcgccgccgcc 14360540



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 11015490 ttcctcctcgcgccgccgcc 11015471



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 10261028 ttcctcctcgcgccgccgcc 10261009



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 8214111 ttcctcctcgcgccgccgcc 8214130
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 5803168 ttcctcctcgcgccgccgcc 5803187
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 9844124 ttcctcctcgcgccgccgcc 9844143



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 9813627 ttcctcctcgcgccgccgcc 9813646



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 8445956 ttcctcctcgcgccgccgcc 8445975
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 13936766 ttcctcctcgcgccgccgcc 13936785
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 9379677 ttcctcctcgcgccgccgcc 9379658



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 9341143 ttcctcctcgcgccgccgcc 9341124



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 9293967 ttcctcctcgcgccgccgcc 9293948
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>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04,
              complete sequence
          Length = 188209

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 176152 ttcctcctcgcgccgccgcc 176133
to top
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22,
             complete sequence
          Length = 128256

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 25747 ttcctcctcgcgccgccgcc 25766
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>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence
          Length = 172103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   cgcggccggggggagggatgggga 135
             |||||||||||||||||| |||||
Sbjct: 88780 cgcggccggggggagggaggggga 88757
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>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1249E06
          Length = 126534

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 112737 ttcctcctcgcgccgccgcc 112756
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     gcaccgagaccttcgtcacc 224
               ||||||||||||||||||||
Sbjct: 7757179 gcaccgagaccttcgtcacc 7757160
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>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 34770 ttcctcctcgcgccgccgcc 34751
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>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011J03
          Length = 176461

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 139931 ttcctcctcgcgccgccgcc 139912



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 101397 ttcctcctcgcgccgccgcc 101378



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 54221 ttcctcctcgcgccgccgcc 54202
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>dbj|AK110780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-B12, full
           insert sequence
          Length = 508

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  ttcctcctcgcgccgccgcc 38
           ||||||||||||||||||||
Sbjct: 307 ttcctcctcgcgccgccgcc 288
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 5803917 ttcctcctcgcgccgccgcc 5803936
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 23616097 ttcctcctcgcgccgccgcc 23616078



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 17843255 ttcctcctcgcgccgccgcc 17843274



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 14314803 ttcctcctcgcgccgccgcc 14314822



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 11015189 ttcctcctcgcgccgccgcc 11015170



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ttcctcctcgcgccgccgcc 38
                ||||||||||||||||||||
Sbjct: 10260910 ttcctcctcgcgccgccgcc 10260891



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      ttcctcctcgcgccgccgcc 38
               ||||||||||||||||||||
Sbjct: 8213992 ttcctcctcgcgccgccgcc 8214011
to top
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 18501 ttcctcctcgcgccgccgcc 18520
to top
>emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa0095H15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142670

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 128784 ttcctcctcgcgccgccgcc 128765
to top
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135439

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 23947 ttcctcctcgcgccgccgcc 23928
to top
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17,
              complete sequence
          Length = 163376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 135183 ttcctcctcgcgccgccgcc 135202



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 129993 ttcctcctcgcgccgccgcc 130012
to top
>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09,
             complete sequence
          Length = 141580

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 82260 ttcctcctcgcgccgccgcc 82279
to top
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134082

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 90085 ttcctcctcgcgccgccgcc 90104
to top
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 67712 ttcctcctcgcgccgccgcc 67731
to top
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 67725 ttcctcctcgcgccgccgcc 67744
to top
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 147543

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 81620 ttcctcctcgcgccgccgcc 81601
to top
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142246

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttcctcctcgcgccgccgcc 38
              ||||||||||||||||||||
Sbjct: 136134 ttcctcctcgcgccgccgcc 136153
to top
>emb|AL731750.3|CNS08C7Z Oryza sativa chromosome 12, . BAC OJ1055_H05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 113332

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttcctcctcgcgccgccgcc 38
             ||||||||||||||||||||
Sbjct: 90156 ttcctcctcgcgccgccgcc 90175
to top
>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
             sequence
          Length = 227692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   ccgccgcggccggggggagg 127
             ||||||||||||||||||||
Sbjct: 71587 ccgccgcggccggggggagg 71568
to top
>dbj|D43643.1|MUSYL1PB Mouse YL-1 mRNA for YL-1 protein (nuclear protein with DNA-binding
           ability), complete cds
          Length = 1289

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 caaggccttccacgtccaca 255
           ||||||||||||||||||||
Sbjct: 739 caaggccttccacgtccaca 720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,163,888
Number of Sequences: 3902068
Number of extensions: 3163888
Number of successful extensions: 67683
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65846
Number of HSP's gapped (non-prelim): 1837
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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