ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07d12 |
|---|---|
| Clone Library Name | barley_pub |
>RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb)| Length = 988 Score = 51.6 bits (122), Expect = 9e-07 Identities = 26/83 (31%), Positives = 47/83 (56%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 MAE L +L S + +L L+ F + + F+TI++VL DA+ + D A+ Sbjct: 1 MAEAFLQVLLENLTSFIGDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLK-DKAIE 59 Query: 377 DWLRRLRNLAHDIDDFLDACHSD 445 +WL++L + A+++DD L C ++ Sbjct: 60 NWLQKLNSAAYEVDDILGECKNE 82
>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)| Length = 1025 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 MAE + VL S + GEL LL F+ + + + F+TI++VL DA+ + D + Sbjct: 1 MAEAFIQVVLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEK-QLNDKPLE 59 Query: 377 DWLRRLRNLAHDIDDFLD 430 +WL++L +++DD LD Sbjct: 60 NWLQKLNAATYEVDDILD 77
>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb)| (Blight resistance protein B149) Length = 947 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/83 (31%), Positives = 47/83 (56%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 MAE L +L + GEL L+ F + + + F+ I++VL DA+ + A++ Sbjct: 1 MAEAFLQVLLDNLTFFIQGELGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKY-KAIK 59 Query: 377 DWLRRLRNLAHDIDDFLDACHSD 445 +WL++L A+++DD LD C ++ Sbjct: 60 NWLQKLNVAAYEVDDILDDCKTE 82
>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight| resistance protein RPI) Length = 970 Score = 47.8 bits (112), Expect = 1e-05 Identities = 25/78 (32%), Positives = 45/78 (57%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 MAE + +L S + GEL LL F+ + + + F+TI++VL DA+ + + + Sbjct: 1 MAEAFIQVLLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEK-QLNNKPLE 59 Query: 377 DWLRRLRNLAHDIDDFLD 430 +WL++L +++DD LD Sbjct: 60 NWLQKLNAATYEVDDILD 77
>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3| Length = 847 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 M + V VL K G + E+ L + DL ++ E I L D E R D + Sbjct: 1 MVDAVTGFVLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEARERE-DEVSK 59 Query: 377 DWLRRLRNLAHDIDDFLD 430 +W + + ++A+DI+D LD Sbjct: 60 EWTKLVLDIAYDIEDVLD 77
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/84 (26%), Positives = 41/84 (48%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 M + + V+ K G+ + E ++ + + DL ++ E I L D E R D + Sbjct: 1 MVDAITEFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEARERE-DEVSK 59 Query: 377 DWLRRLRNLAHDIDDFLDACHSDL 448 +W + + + A+D++D LD H L Sbjct: 60 EWSKLVLDFAYDVEDVLDTYHLKL 83
>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180| Length = 839 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/79 (25%), Positives = 40/79 (50%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 MAE +++ + K G + E L ++ ++DE + L DA+ + + VR Sbjct: 1 MAEAIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESE-RVR 59 Query: 377 DWLRRLRNLAHDIDDFLDA 433 +W+ +R ++D +D L+A Sbjct: 60 NWVAGIREASYDAEDILEA 78
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 35.4 bits (80), Expect = 0.070 Identities = 19/78 (24%), Positives = 39/78 (50%) Frame = +2 Query: 197 MAEGVLASVLAKFGSSVWGELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVR 376 M + + V+ K + + E +L + DL ++ E I+ L + EV D + Sbjct: 1 MVDAITEFVVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKE-DEVSK 59 Query: 377 DWLRRLRNLAHDIDDFLD 430 +W + + ++A+D++D LD Sbjct: 60 EWTKLVLDIAYDVEDVLD 77
>YCJF_SHIFL (Q83LB2) UPF0283 membrane protein ycjF| Length = 353 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 224 LAKFGSSVWGELTLLRSFRTDLRAME-DEFATIRSVLADAEVRGGSGDSAVRDWLR--RL 394 LA FG+SV G+ + + A + ++ + A A + G S V +W R RL Sbjct: 75 LALFGASVVGQ-----GIQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRL 129 Query: 395 RNLAHDIDDFLDACHS 442 R AH+ D+ D HS Sbjct: 130 RQRAHERDEARDLLHS 145
>YCJF_ECOLI (P0A8R7) UPF0283 membrane protein ycjF| Length = 353 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 224 LAKFGSSVWGELTLLRSFRTDLRAME-DEFATIRSVLADAEVRGGSGDSAVRDWLR--RL 394 LA FG+SV G+ + + A + ++ + A A + G S V +W R RL Sbjct: 75 LALFGASVVGQ-----GVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRL 129 Query: 395 RNLAHDIDDFLDACHS 442 R AH+ D+ D HS Sbjct: 130 RQRAHERDEARDLLHS 145
>YCJF_ECOL6 (P0A8R8) UPF0283 membrane protein ycjF| Length = 353 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 224 LAKFGSSVWGELTLLRSFRTDLRAME-DEFATIRSVLADAEVRGGSGDSAVRDWLR--RL 394 LA FG+SV G+ + + A + ++ + A A + G S V +W R RL Sbjct: 75 LALFGASVVGQ-----GVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRL 129 Query: 395 RNLAHDIDDFLDACHS 442 R AH+ D+ D HS Sbjct: 130 RQRAHERDEARDLLHS 145
>YCJF_ECO57 (Q8X8K9) UPF0283 membrane protein ycjF| Length = 353 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 224 LAKFGSSVWGELTLLRSFRTDLRAME-DEFATIRSVLADAEVRGGSGDSAVRDWLR--RL 394 LA FG+SV G+ + + A + ++ + A A + G S V +W R RL Sbjct: 75 LALFGASVVGQ-----GVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRL 129 Query: 395 RNLAHDIDDFLDACHS 442 R AH+ D+ D HS Sbjct: 130 RQRAHERDEARDLLHS 145
>YCJF_SHIDY (Q9LA29) UPF0283 membrane protein ycjF| Length = 344 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 224 LAKFGSSVWGELTLLRSFRTDLRAME-DEFATIRSVLADAEVRGGSGDSAVRDWLR--RL 394 LA FG+SV G+ + + A + ++ + A A + G S V +W R RL Sbjct: 75 LALFGASVVGQ-----GVQWTMNACQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRL 129 Query: 395 RNLAHDIDDFLDACHS 442 R AH+ D+ D HS Sbjct: 130 RQRAHERDEARDLLHS 145
>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1| Length = 396 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/89 (23%), Positives = 33/89 (37%) Frame = -1 Query: 268 QQRELSPNRGPELRQHRSKHPLRHGSRXXXXXXXXXXXXXXXVNTNQTVSRWRGAGHYKS 89 Q+RE P RG E RQHR H +N+ +G G + Sbjct: 109 QEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRD 168 Query: 88 IQKSQVNSQHNETPSISIKRRKNLENRKI 2 Q Q +Q E + +RR++ + + Sbjct: 169 TQNLQ--AQEEEREFYNARRREHRQRNDV 195
>TRPF_RALSO (Q8XXX9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 230 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +2 Query: 257 LTLLRSFR----TDLRAMEDEFATIRSVLADAEVRGGSGDSAVRDW 382 L LR+ R TDL D FA + +L DA V G G V DW Sbjct: 104 LPWLRALRVQPGTDLVEFADRFAAAQGLLLDAFVEGYGGGGHVFDW 149
>GLSA_RHIEC (O87405) Thermolabile glutaminase (EC 3.5.1.2) (Glutaminase A)| Length = 309 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 299 EDEFATIRSVLADAEVRGGSGDSAVRDWLRRLRNLAHDIDDFL 427 +DE TI +A +E + G + A+ +++R RNL H +D L Sbjct: 146 DDESITIDDKVARSETQTGYRNVALANFMRAYRNLDHPVDHVL 188
>POLG_CSFVA (P19712) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3898 Score = 30.0 bits (66), Expect = 2.9 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 Query: 119 RHCLVCVDCVRRDWRG 166 +HC++C C RDWRG Sbjct: 1482 KHCMLCTVCEDRDWRG 1497
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte receptor) (Rosette receptor) Length = 351 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 Query: 322 PDGGELVLHGPQVSPEAPQQRELSPNRGPELRQHRSKHPLRHGS 191 P G V H PQ P AP ++ +GP L + R + HG+ Sbjct: 298 PPPGHRVQHQPQKRPPAPSGTQVHQQKGPPLPRPRVQPKPPHGA 341
>SSP1_BOMMO (P09179) Sex-specific storage-protein 1 precursor (SP 1)| (Methionine-rich storage protein) Length = 747 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +2 Query: 251 GELTLLRSFRTDLRAMEDEFATIRSVLADAEVRGGSGDSAVRDWLRRLRN 400 G+ T++RS D++ E+ + R V+ + G G + V+DW + RN Sbjct: 566 GKNTIVRS-SMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWWCKSRN 614
>POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3988 Score = 29.3 bits (64), Expect = 5.0 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +2 Query: 119 RHCLVCVDCVRRDWRG 166 RHC++C C R+W+G Sbjct: 1482 RHCIICTVCEGREWKG 1497
>POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3898 Score = 29.3 bits (64), Expect = 5.0 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +2 Query: 119 RHCLVCVDCVRRDWRG 166 +HC++C C R+WRG Sbjct: 1482 KHCILCTVCENREWRG 1497
>RMD8_YEAST (P43620) Sporulation protein RMD8| Length = 662 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = -2 Query: 456 AARRSEWQASRKSSMSWARFLSLRSQSRTALSPLPPRTSASASTLRMVANSSSM 295 +ARR E +S SS R S R ++PLPPRTS ++ L ++ ++ Sbjct: 99 SARREERLSS--SSSDRPRQYERLSSRRKMINPLPPRTSKTSQKLVLIPEDDNL 150
>GLCA_SOYBN (P13916) Beta-conglycinin, alpha chain precursor| Length = 605 Score = 28.5 bits (62), Expect = 8.6 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 268 QQRELSPNRGPELRQHRSKHPLRHGS 191 QQRE + ELR+H++K+P GS Sbjct: 175 QQRESEESEDSELRRHKNKNPFLFGS 200
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Frame = +2 Query: 350 GGSGDSAVRDWLRRLRNLAHDIDDF------LDACHSD 445 GGSG SA + L+R + D+DD+ LDAC D Sbjct: 835 GGSGKSAGKRLLKRAAKNSVDLDDYEEEQDHLDACFKD 872
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 28.5 bits (62), Expect = 8.6 Identities = 22/82 (26%), Positives = 34/82 (41%) Frame = -2 Query: 444 SEWQASRKSSMSWARFLSLRSQSRTALSPLPPRTSASASTLRMVANSSSMAXXXXXXXXX 265 S +S SS S + S S S ++ S P TS+++S+ ++SSS + Sbjct: 178 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSS 237 Query: 264 XXXSPQTEDPNFASTEASTPSA 199 F ST TPS+ Sbjct: 238 SSFITTMSSSTFISTVTVTPSS 259
>FLUF_NEUCR (O13360) Conidial development protein fluffy| Length = 792 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 12/54 (22%) Frame = +2 Query: 278 RTDLRAMEDE----FATIRSVLADAE--------VRGGSGDSAVRDWLRRLRNL 403 R+++ + +E A IR+++ D + +RG A+ DW+R +RNL Sbjct: 51 RSEIERLRNEQRQGHAVIRALINDEQDWESFLSRIRGDESPEAIADWIRSIRNL 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,016,665 Number of Sequences: 219361 Number of extensions: 740623 Number of successful extensions: 3032 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3024 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
